RNA–Protein interactions for RNA: ENST00000567887.5

MACF1-232, Transcript of microtubule-actin crosslinking factor 1, humanhuman

APPRIS P5 TSL 5 BASIC

Gene MACF1, Length 24,319 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-232ENST00000567887 SIPA1L1O43166 1804 aa3.75□□□□□ -1.81
MACF1-232ENST00000567887 LRRC37AA6NMS7 1700 aa3.74□□□□□ -1.81
MACF1-232ENST00000567887 ZCCHC13Q8WW36 166 aaKnown RBP3.74□□□□□ -1.81
MACF1-232ENST00000567887 FLG2Q5D862 2391 aaPredicted RBP3.74□□□□□ -1.81
MACF1-232ENST00000567887 LCTP09848 1927 aa3.73□□□□□ -1.81
MACF1-232ENST00000567887 A0A0G2JMZ2 1700 aa3.73□□□□□ -1.81
MACF1-232ENST00000567887 LRRC37A2A6NM11 1700 aa3.73□□□□□ -1.81
MACF1-232ENST00000567887 CNBPP62633 177 aaKnown RBP3.73□□□□□ -1.81
MACF1-232ENST00000567887 ZNF462Q96JM2 2506 aa3.73□□□□□ -1.81
MACF1-232ENST00000567887 Q5XG85 94 aa3.73□□□□□ -1.81
MACF1-232ENST00000567887 TSC2P49815 1807 aa3.72□□□□□ -1.81
MACF1-232ENST00000567887 ARID2Q68CP9 1835 aa3.72□□□□□ -1.81
MACF1-232ENST00000567887 FN1P02751 2386 aaKnown RBP3.72□□□□□ -1.81
MACF1-232ENST00000567887 K7EIL1 84 aa3.72□□□□□ -1.81
MACF1-232ENST00000567887 COL4A5P29400 1685 aa3.72□□□□□ -1.81
MACF1-232ENST00000567887 UBR3Q6ZT12 1888 aa3.71□□□□□ -1.82
MACF1-232ENST00000567887 LINC00612Q8N6U2 182 aa3.71□□□□□ -1.82
MACF1-232ENST00000567887 COL5A3P25940 1745 aaPredicted RBP3.71□□□□□ -1.82
MACF1-232ENST00000567887 SEC61BP60468 96 aaKnown RBP3.71□□□□□ -1.82
MACF1-232ENST00000567887 COL18A1P39060 1754 aa3.7□□□□□ -1.82
MACF1-232ENST00000567887 CEP295Q9C0D2 2601 aa3.7□□□□□ -1.82
MACF1-232ENST00000567887 TLN2Q9Y4G6 2542 aa3.7□□□□□ -1.82
MACF1-232ENST00000567887 PKD1L2Q7Z442 2459 aa3.69□□□□□ -1.82
MACF1-232ENST00000567887 USP9YO00507 2555 aaPredicted RBP3.69□□□□□ -1.82
MACF1-232ENST00000567887 TICRRQ7Z2Z1 1910 aa3.69□□□□□ -1.82
MACF1-232ENST00000567887 SIP14410 1827 aa3.69□□□□□ -1.82
MACF1-232ENST00000567887 FNDC1Q4ZHG4 1894 aaPredicted RBP3.69□□□□□ -1.82
MACF1-232ENST00000567887 ANAPC1Q9H1A4 1944 aa3.69□□□□□ -1.82
MACF1-232ENST00000567887 ACANP16112 2415 aa3.69□□□□□ -1.82
MACF1-232ENST00000567887 PLXNA1Q9UIW2 1896 aa3.68□□□□□ -1.82
MACF1-232ENST00000567887 ANKRD11Q6UB99 2663 aaPredicted RBP3.68□□□□□ -1.82
MACF1-232ENST00000567887 NRXN2Q9P2S2 1712 aa3.68□□□□□ -1.82
MACF1-232ENST00000567887 ALPK3Q96L96 1907 aa3.68□□□□□ -1.82
MACF1-232ENST00000567887 PRRC2CQ9Y520 2896 aaKnown RBP3.68□□□□□ -1.82
MACF1-232ENST00000567887 LRRK2Q5S007 2527 aa3.68□□□□□ -1.82
MACF1-232ENST00000567887 PRR34Q9NV39 138 aa3.68□□□□□ -1.82
MACF1-232ENST00000567887 SETD2Q9BYW2 2564 aaPredicted RBP3.68□□□□□ -1.82
MACF1-232ENST00000567887 TNP2Q05952 138 aa3.67□□□□□ -1.82
MACF1-232ENST00000567887 C10orf95Q9H7T3 257 aa3.67□□□□□ -1.82
MACF1-232ENST00000567887 PLXNB3Q9ULL4 1909 aa3.66□□□□□ -1.82
MACF1-232ENST00000567887 SPTBN4Q9H254 2564 aa3.66□□□□□ -1.82
MACF1-232ENST00000567887 Q5W150 140 aa3.66□□□□□ -1.82
MACF1-232ENST00000567887 C10orf142B7Z368 130 aa3.66□□□□□ -1.82
MACF1-232ENST00000567887 BRWD3Q6RI45 1802 aa3.66□□□□□ -1.82
MACF1-232ENST00000567887 USP9XQ93008 2570 aaPredicted RBP3.66□□□□□ -1.82
MACF1-232ENST00000567887 MTORP42345 2549 aa3.66□□□□□ -1.82
MACF1-232ENST00000567887 NAV2Q8IVL1 2488 aa3.66□□□□□ -1.82
MACF1-232ENST00000567887 Q6ZR54 194 aa3.65□□□□□ -1.83
MACF1-232ENST00000567887 KRTAP25-1Q3LHN0 102 aa3.64□□□□□ -1.83
MACF1-232ENST00000567887 ADAMTSL1Q8N6G6 1762 aa3.64□□□□□ -1.83
MACF1-232ENST00000567887 CYSTM1Q9H1C7 97 aa3.63□□□□□ -1.83
MACF1-232ENST00000567887 A8MU10 97 aa3.63□□□□□ -1.83
MACF1-232ENST00000567887 KRTAP10-3P60369 221 aa3.63□□□□□ -1.83
MACF1-232ENST00000567887 XIRP1Q702N8 1843 aaKnown RBP3.63□□□□□ -1.83
MACF1-232ENST00000567887 CEP192Q8TEP8 1941 aa3.62□□□□□ -1.83
MACF1-232ENST00000567887 ZFYVE26Q68DK2 2539 aa3.62□□□□□ -1.83
MACF1-232ENST00000567887 NOTCH4Q99466 2003 aa3.62□□□□□ -1.83
MACF1-232ENST00000567887 TNS1Q9HBL0 1735 aaKnown RBP3.61□□□□□ -1.83
MACF1-232ENST00000567887 WDR90Q96KV7 1748 aa3.6□□□□□ -1.83
MACF1-232ENST00000567887 PLXNA3P51805 1871 aa3.6□□□□□ -1.83
MACF1-232ENST00000567887 KIF26AQ9ULI4 1882 aaPredicted RBP3.59□□□□□ -1.83
MACF1-232ENST00000567887 THSD7AQ9UPZ6 1657 aa3.58□□□□□ -1.84
MACF1-232ENST00000567887 PANO1I0J062 215 aa3.58□□□□□ -1.84
MACF1-232ENST00000567887 MMP24-AS1A0A0U1RRL7 71 aa3.58□□□□□ -1.84
MACF1-232ENST00000567887 TMEM131Q92545 1883 aa3.58□□□□□ -1.84
MACF1-232ENST00000567887 MGAMO43451 1857 aa3.58□□□□□ -1.84
MACF1-232ENST00000567887 PLXNA4Q9HCM2 1894 aa3.57□□□□□ -1.84
MACF1-232ENST00000567887 ABCA12Q86UK0 2595 aa3.57□□□□□ -1.84
MACF1-232ENST00000567887 POLQO75417 2590 aa3.57□□□□□ -1.84
MACF1-232ENST00000567887 JMJD1CQ15652 2540 aa3.57□□□□□ -1.84
MACF1-232ENST00000567887 P0C880 135 aa3.57□□□□□ -1.84
MACF1-232ENST00000567887 LINC00472Q9H8W2 130 aa3.57□□□□□ -1.84
MACF1-232ENST00000567887 LRP4O75096 1905 aa3.57□□□□□ -1.84
MACF1-232ENST00000567887 CR1P17927 2039 aa3.56□□□□□ -1.84
MACF1-232ENST00000567887 LTBP1Q14766 1721 aa3.56□□□□□ -1.84
MACF1-232ENST00000567887 ASB16-AS1Q495Z4 193 aa3.55□□□□□ -1.84
MACF1-232ENST00000567887 COL5A1P20908 1838 aaPredicted RBP3.55□□□□□ -1.84
MACF1-232ENST00000567887 COL4A3Q01955 1670 aa3.55□□□□□ -1.84
MACF1-232ENST00000567887 SPRR1BP22528 89 aa3.55□□□□□ -1.84
MACF1-232ENST00000567887 A8MUU9 505 aa3.55□□□□□ -1.84
MACF1-232ENST00000567887 MUC6Q6W4X9 2439 aa3.55□□□□□ -1.84
MACF1-232ENST00000567887 KRTAP26-1Q6PEX3 210 aa3.54□□□□□ -1.84
MACF1-232ENST00000567887 PTPRSQ13332 1948 aa3.54□□□□□ -1.84
MACF1-232ENST00000567887 COL4A1P02462 1669 aa3.53□□□□□ -1.84
MACF1-232ENST00000567887 TNP1P09430 55 aa3.53□□□□□ -1.84
MACF1-232ENST00000567887 PTPRBP23467 1997 aa3.53□□□□□ -1.84
MACF1-232ENST00000567887 PLXNA2O75051 1894 aa3.52□□□□□ -1.85
MACF1-232ENST00000567887 OXTP01178 125 aa3.52□□□□□ -1.85
MACF1-232ENST00000567887 TANC1Q9C0D5 1861 aa3.52□□□□□ -1.85
MACF1-232ENST00000567887 COL11A2P13942 1736 aaPredicted RBP3.52□□□□□ -1.85
MACF1-232ENST00000567887 A0A096LNT2 108 aa3.51□□□□□ -1.85
MACF1-232ENST00000567887 PLAC8Q9NZF1 115 aa3.51□□□□□ -1.85
MACF1-232ENST00000567887 CENPEQ02224 2701 aa3.51□□□□□ -1.85
MACF1-232ENST00000567887 NUP210Q8TEM1 1887 aaPredicted RBP3.51□□□□□ -1.85
MACF1-232ENST00000567887 THSD7BQ9C0I4 1608 aa3.51□□□□□ -1.85
MACF1-232ENST00000567887 PIEZO2Q9H5I5 2752 aa3.5□□□□□ -1.85
MACF1-232ENST00000567887 KIAA1549LQ6ZVL6 1849 aa3.49□□□□□ -1.85
MACF1-232ENST00000567887 RAI1Q7Z5J4 1906 aaPredicted RBP3.48□□□□□ -1.85
MACF1-232ENST00000567887 CHD8Q9HCK8 2581 aa3.48□□□□□ -1.85
MACF1-232ENST00000567887 KRTAP10-8P60410 259 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms