RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	WFDC9	Q8NEX5	89 aa		0.41	□□□□□ -2.34
KTN1-222	ENST00000555506	ABCA2	Q9BZC7	2435 aa		0.4	□□□□□ -2.34
KTN1-222	ENST00000555506	CD163L1	Q9NR16	1453 aa		0.4	□□□□□ -2.34
KTN1-222	ENST00000555506	HUWE1	Q7Z6Z7	4374 aa	Known RBP	0.4	□□□□□ -2.34
KTN1-222	ENST00000555506	TIAM2	Q8IVF5	1701 aa		0.4	□□□□□ -2.34
KTN1-222	ENST00000555506	IFI6	P09912	130 aa		0.4	□□□□□ -2.35
KTN1-222	ENST00000555506	DEFB105A	Q8NG35	78 aa		0.4	□□□□□ -2.35
KTN1-222	ENST00000555506	CCDC88B	A6NC98	1476 aa		0.4	□□□□□ -2.35
KTN1-222	ENST00000555506	CLIP1	P30622	1438 aa		0.39	□□□□□ -2.35
KTN1-222	ENST00000555506	HIVEP3	Q5T1R4	2406 aa		0.39	□□□□□ -2.35
KTN1-222	ENST00000555506	LCE6A	A0A183	80 aa		0.39	□□□□□ -2.35
KTN1-222	ENST00000555506	SMIM13	P0DJ93	91 aa		0.39	□□□□□ -2.35
KTN1-222	ENST00000555506		U3KQA8	63 aa		0.39	□□□□□ -2.35
KTN1-222	ENST00000555506	PREX1	Q8TCU6	1659 aa		0.39	□□□□□ -2.35
KTN1-222	ENST00000555506	PKD1L1	Q8TDX9	2849 aa		0.38	□□□□□ -2.35
KTN1-222	ENST00000555506	HMGA1	P17096	107 aa	Known RBP	0.38	□□□□□ -2.35
KTN1-222	ENST00000555506	APLN	Q9ULZ1	77 aa		0.38	□□□□□ -2.35
KTN1-222	ENST00000555506	UMAD1	C9J7I0	102 aa		0.37	□□□□□ -2.35
KTN1-222	ENST00000555506	CCL22	O00626	93 aa		0.37	□□□□□ -2.35
KTN1-222	ENST00000555506	IFI27	P40305	119 aa	Predicted RBP	0.37	□□□□□ -2.35
KTN1-222	ENST00000555506	KLK9	Q2XQG4	91 aa		0.37	□□□□□ -2.35
KTN1-222	ENST00000555506	PRKDC	P78527	4128 aa	Known RBP	0.37	□□□□□ -2.35
KTN1-222	ENST00000555506	MYO5C	Q9NQX4	1742 aa		0.37	□□□□□ -2.35
KTN1-222	ENST00000555506	IQGAP3	Q86VI3	1631 aa		0.37	□□□□□ -2.35
KTN1-222	ENST00000555506	H1FX-AS1	Q4G0G2	97 aa		0.36	□□□□□ -2.35
KTN1-222	ENST00000555506	LELP1	Q5T871	98 aa		0.36	□□□□□ -2.35
KTN1-222	ENST00000555506	FAT4	Q6V0I7	4981 aa		0.36	□□□□□ -2.35
KTN1-222	ENST00000555506	MAP1B	P46821	2468 aa	Known RBP	0.36	□□□□□ -2.35
KTN1-222	ENST00000555506		A0A087WXM4	84 aa		0.35	□□□□□ -2.35
KTN1-222	ENST00000555506	SPINK4	O60575	86 aa		0.35	□□□□□ -2.35
KTN1-222	ENST00000555506	RPL38	P63173	70 aa	Known RBP	0.35	□□□□□ -2.35
KTN1-222	ENST00000555506	SMCO4	Q9NRQ5	59 aa		0.35	□□□□□ -2.35
KTN1-222	ENST00000555506	WNK1	Q9H4A3	2382 aa		0.35	□□□□□ -2.35
KTN1-222	ENST00000555506	NWD1	Q149M9	1564 aa		0.35	□□□□□ -2.35
KTN1-222	ENST00000555506	TNXB	P22105	4242 aa		0.35	□□□□□ -2.35
KTN1-222	ENST00000555506	HRNR	Q86YZ3	2850 aa	Predicted RBP	0.35	□□□□□ -2.35
KTN1-222	ENST00000555506	CFAP43	Q8NDM7	1665 aa		0.35	□□□□□ -2.35
KTN1-222	ENST00000555506	UGGT2	Q9NYU1	1516 aa		0.35	□□□□□ -2.35
KTN1-222	ENST00000555506	NREP	Q16612	68 aa		0.35	□□□□□ -2.35
KTN1-222	ENST00000555506	SSPO	A2VEC9	5147 aa		0.34	□□□□□ -2.35
KTN1-222	ENST00000555506	MUC2	Q02817	5179 aa		0.34	□□□□□ -2.35
KTN1-222	ENST00000555506	EP300	Q09472	2414 aa	Predicted RBP	0.34	□□□□□ -2.35
KTN1-222	ENST00000555506	DMBT1	Q9UGM3	2413 aa	Predicted RBP	0.34	□□□□□ -2.35
KTN1-222	ENST00000555506	KMT2A	Q03164	3969 aa		0.34	□□□□□ -2.36
KTN1-222	ENST00000555506	FXYD6	Q9H0Q3	95 aa		0.34	□□□□□ -2.36
KTN1-222	ENST00000555506	COX6B2	Q6YFQ2	88 aa		0.33	□□□□□ -2.36
KTN1-222	ENST00000555506	MAST4	O15021	2626 aa		0.33	□□□□□ -2.36
KTN1-222	ENST00000555506	PDE4DIP	Q5VU43	2346 aa		0.33	□□□□□ -2.36
KTN1-222	ENST00000555506	NES	P48681	1621 aa		0.33	□□□□□ -2.36
KTN1-222	ENST00000555506	TNRC6C	Q9HCJ0	1690 aa	Known RBP	0.32	□□□□□ -2.36
KTN1-222	ENST00000555506	PDCD5	O14737	125 aa		0.32	□□□□□ -2.36
KTN1-222	ENST00000555506	MYCBP2	O75592	4640 aa		0.32	□□□□□ -2.36
KTN1-222	ENST00000555506	ANKRD50	Q9ULJ7	1429 aa		0.32	□□□□□ -2.36
KTN1-222	ENST00000555506	EIF2AK4	Q9P2K8	1649 aa	Known RBP	0.31	□□□□□ -2.36
KTN1-222	ENST00000555506	CDKN2A-AS1	Q9UH64	79 aa		0.31	□□□□□ -2.36
KTN1-222	ENST00000555506	PLCH1	Q4KWH8	1693 aa		0.31	□□□□□ -2.36
KTN1-222	ENST00000555506	RICTOR	Q6R327	1708 aa		0.31	□□□□□ -2.36
KTN1-222	ENST00000555506	PARP4	Q9UKK3	1724 aa	Known RBP	0.31	□□□□□ -2.36
KTN1-222	ENST00000555506	CACNA1A	O00555	2505 aa		0.31	□□□□□ -2.36
KTN1-222	ENST00000555506	HEPN1	Q6WQI6	88 aa		0.3	□□□□□ -2.36
KTN1-222	ENST00000555506	DNMBP	Q6XZF7	1577 aa		0.3	□□□□□ -2.36
KTN1-222	ENST00000555506	TRANK1	O15050	2925 aa		0.3	□□□□□ -2.36
KTN1-222	ENST00000555506	NDUFA4	O00483	81 aa		0.29	□□□□□ -2.36
KTN1-222	ENST00000555506	NDUFA3	O95167	84 aa		0.29	□□□□□ -2.36
KTN1-222	ENST00000555506	APC2	O95996	2303 aa		0.29	□□□□□ -2.36
KTN1-222	ENST00000555506	DEFA5	Q01523	94 aa		0.29	□□□□□ -2.36
KTN1-222	ENST00000555506	DUOX2	Q9NRD8	1548 aa		0.29	□□□□□ -2.36
KTN1-222	ENST00000555506	PRM1	P04553	51 aa		0.29	□□□□□ -2.36
KTN1-222	ENST00000555506	WFDC13	Q8IUB5	93 aa		0.29	□□□□□ -2.36
KTN1-222	ENST00000555506	ITSN1	Q15811	1721 aa		0.28	□□□□□ -2.36
KTN1-222	ENST00000555506	CDC42BPG	Q6DT37	1551 aa		0.28	□□□□□ -2.36
KTN1-222	ENST00000555506	BPTF	Q12830	3046 aa		0.28	□□□□□ -2.37
KTN1-222	ENST00000555506	ANKHD1	Q8IWZ3	2542 aa	Known RBP	0.27	□□□□□ -2.37
KTN1-222	ENST00000555506	C4A	P0C0L4	1744 aa		0.27	□□□□□ -2.37
KTN1-222	ENST00000555506	C4B	P0C0L5	1744 aa		0.27	□□□□□ -2.37
KTN1-222	ENST00000555506	LMTK2	Q8IWU2	1503 aa		0.27	□□□□□ -2.37
KTN1-222	ENST00000555506	LPA	P08519	4548 aa		0.27	□□□□□ -2.37
KTN1-222	ENST00000555506	SETX	Q7Z333	2677 aa	Known RBP	0.27	□□□□□ -2.37
KTN1-222	ENST00000555506	ALMS1	Q8TCU4	4167 aa		0.27	□□□□□ -2.37
KTN1-222	ENST00000555506	CIC	Q96RK0	1608 aa	Predicted RBP	0.27	□□□□□ -2.37
KTN1-222	ENST00000555506	WIZ	O95785	1651 aa		0.27	□□□□□ -2.37
KTN1-222	ENST00000555506	DIP2A	Q14689	1571 aa		0.27	□□□□□ -2.37
KTN1-222	ENST00000555506	DDX60L	Q5H9U9	1706 aa	Known RBP	0.26	□□□□□ -2.37
KTN1-222	ENST00000555506	ASXL1	Q8IXJ9	1541 aa		0.26	□□□□□ -2.37
KTN1-222	ENST00000555506	ADAMTS12	P58397	1594 aa		0.26	□□□□□ -2.37
KTN1-222	ENST00000555506	ZC3H13	Q5T200	1668 aa	Known RBP	0.26	□□□□□ -2.37
KTN1-222	ENST00000555506	DCHS2	Q6V1P9	2916 aa		0.26	□□□□□ -2.37
KTN1-222	ENST00000555506	TJP1	Q07157	1748 aa		0.26	□□□□□ -2.37
KTN1-222	ENST00000555506		H3BVH4	76 aa		0.25	□□□□□ -2.37
KTN1-222	ENST00000555506	ABCA9	Q8IUA7	1624 aa		0.24	□□□□□ -2.37
KTN1-222	ENST00000555506	DSP	P15924	2871 aa	Known RBP	0.24	□□□□□ -2.37
KTN1-222	ENST00000555506	NBAS	A2RRP1	2371 aa		0.24	□□□□□ -2.37
KTN1-222	ENST00000555506	LOC730098	B7Z3J9	87 aa		0.23	□□□□□ -2.37
KTN1-222	ENST00000555506	HILPDA	Q9Y5L2	63 aa		0.23	□□□□□ -2.37
KTN1-222	ENST00000555506	RNF17	Q9BXT8	1623 aa	Known RBP	0.23	□□□□□ -2.37
KTN1-222	ENST00000555506	NRAP	Q86VF7	1730 aa		0.23	□□□□□ -2.37
KTN1-222	ENST00000555506	C3orf79	P0CE67	100 aa		0.22	□□□□□ -2.37
KTN1-222	ENST00000555506	KCNQ1DN	Q9H478	68 aa		0.22	□□□□□ -2.37
KTN1-222	ENST00000555506	MADD	Q8WXG6	1647 aa		0.22	□□□□□ -2.37
KTN1-222	ENST00000555506	KMT2C	Q8NEZ4	4911 aa	Known RBP	0.22	□□□□□ -2.37

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