RNA–Protein interactions for RNA: ENST00000549738.5

GNPTAB-205, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 4

Gene GNPTAB, Length 550 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-205ENST00000549738 KNTC1P50748 2209 aa1.47□□□□□ -2.17
GNPTAB-205ENST00000549738 KIAA0586Q9BVV6 1533 aa1.47□□□□□ -2.17
GNPTAB-205ENST00000549738 SERF2P84101 59 aa1.47□□□□□ -2.17
GNPTAB-205ENST00000549738 MRPL34Q9BQ48 92 aaKnown RBP1.47□□□□□ -2.17
GNPTAB-205ENST00000549738 MRPL33O75394 65 aaKnown RBP1.46□□□□□ -2.18
GNPTAB-205ENST00000549738 PLNP26678 52 aa1.46□□□□□ -2.18
GNPTAB-205ENST00000549738 COX6A2Q02221 97 aa1.46□□□□□ -2.18
GNPTAB-205ENST00000549738 JMJD1CQ15652 2540 aa1.46□□□□□ -2.18
GNPTAB-205ENST00000549738 SORL1Q92673 2214 aa1.46□□□□□ -2.18
GNPTAB-205ENST00000549738 CRIP1P50238 77 aa1.45□□□□□ -2.18
GNPTAB-205ENST00000549738 HMCN1Q96RW7 5635 aa1.44□□□□□ -2.18
GNPTAB-205ENST00000549738 URB1O60287 2271 aaKnown RBP1.44□□□□□ -2.18
GNPTAB-205ENST00000549738 COX6B1P14854 86 aa1.44□□□□□ -2.18
GNPTAB-205ENST00000549738 PRO0255Q9UI72 69 aa1.44□□□□□ -2.18
GNPTAB-205ENST00000549738 TNCP24821 2201 aa1.43□□□□□ -2.18
GNPTAB-205ENST00000549738 FAM208AQ9UK61 1670 aaKnown RBP1.43□□□□□ -2.18
GNPTAB-205ENST00000549738 A0A0D9SG42 100 aa1.43□□□□□ -2.18
GNPTAB-205ENST00000549738 FAM208BQ5VWN6 2430 aa1.42□□□□□ -2.18
GNPTAB-205ENST00000549738 COX6B2Q6YFQ2 88 aa1.42□□□□□ -2.18
GNPTAB-205ENST00000549738 Q8IZM0 81 aa1.42□□□□□ -2.18
GNPTAB-205ENST00000549738 ABRACLQ9P1F3 81 aa1.42□□□□□ -2.18
GNPTAB-205ENST00000549738 NAV3Q8IVL0 2385 aa1.42□□□□□ -2.18
GNPTAB-205ENST00000549738 TOGARAM1Q9Y4F4 1720 aa1.41□□□□□ -2.18
GNPTAB-205ENST00000549738 SMIM27A0A1W2PRY6 76 aa1.41□□□□□ -2.18
GNPTAB-205ENST00000549738 CCL22O00626 93 aa1.41□□□□□ -2.18
GNPTAB-205ENST00000549738 CDKN2A-AS1Q9UH64 79 aa1.41□□□□□ -2.18
GNPTAB-205ENST00000549738 AHCTF1Q8WYP5 2266 aa1.41□□□□□ -2.18
GNPTAB-205ENST00000549738 RP1L1Q8IWN7 2480 aaPredicted RBP1.41□□□□□ -2.18
GNPTAB-205ENST00000549738 USP24Q9UPU5 2620 aa1.4□□□□□ -2.18
GNPTAB-205ENST00000549738 NDUFA3O95167 84 aa1.4□□□□□ -2.19
GNPTAB-205ENST00000549738 KRTAP10-4P60372 401 aaPredicted RBP1.4□□□□□ -2.19
GNPTAB-205ENST00000549738 KRTAP21-2Q3LI59 83 aa1.39□□□□□ -2.19
GNPTAB-205ENST00000549738 PRO3102Q9H379 93 aa1.39□□□□□ -2.19
GNPTAB-205ENST00000549738 GOLGA4Q13439 2230 aaKnown RBP1.39□□□□□ -2.19
GNPTAB-205ENST00000549738 C4AP0C0L4 1744 aa1.38□□□□□ -2.19
GNPTAB-205ENST00000549738 C4BP0C0L5 1744 aa1.38□□□□□ -2.19
GNPTAB-205ENST00000549738 SPRR1AP35321 89 aa1.38□□□□□ -2.19
GNPTAB-205ENST00000549738 PRB3Q04118 309 aaPredicted RBP1.38□□□□□ -2.19
GNPTAB-205ENST00000549738 LELP1Q5T871 98 aa1.38□□□□□ -2.19
GNPTAB-205ENST00000549738 ASH1LQ9NR48 2969 aaKnown RBP1.38□□□□□ -2.19
GNPTAB-205ENST00000549738 DEPDC5O75140 1603 aa1.37□□□□□ -2.19
GNPTAB-205ENST00000549738 CACNA1EQ15878 2313 aa1.37□□□□□ -2.19
GNPTAB-205ENST00000549738 LINC01546A6NGU7 62 aa1.37□□□□□ -2.19
GNPTAB-205ENST00000549738 Q5VSD8 79 aa1.37□□□□□ -2.19
GNPTAB-205ENST00000549738 LOC730098B7Z3J9 87 aa1.36□□□□□ -2.19
GNPTAB-205ENST00000549738 H0YAA0 97 aa1.36□□□□□ -2.19
GNPTAB-205ENST00000549738 H0YGX0 51 aa1.36□□□□□ -2.19
GNPTAB-205ENST00000549738 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.36□□□□□ -2.19
GNPTAB-205ENST00000549738 PIEZO2Q9H5I5 2752 aa1.36□□□□□ -2.19
GNPTAB-205ENST00000549738 MUC6Q6W4X9 2439 aa1.36□□□□□ -2.19
GNPTAB-205ENST00000549738 LINC00158P58513 81 aa1.35□□□□□ -2.19
GNPTAB-205ENST00000549738 BPTFQ12830 3046 aa1.34□□□□□ -2.19
GNPTAB-205ENST00000549738 OTOGLQ3ZCN5 2332 aa1.34□□□□□ -2.19
GNPTAB-205ENST00000549738 UBR4Q5T4S7 5183 aa1.34□□□□□ -2.19
GNPTAB-205ENST00000549738 LYNX1G3V0Z9 82 aa1.34□□□□□ -2.19
GNPTAB-205ENST00000549738 ROS1P08922 2347 aa1.34□□□□□ -2.2
GNPTAB-205ENST00000549738 TRPM2O94759 1503 aa1.34□□□□□ -2.2
GNPTAB-205ENST00000549738 COL6A6A6NMZ7 2263 aa1.33□□□□□ -2.2
GNPTAB-205ENST00000549738 TRANK1O15050 2925 aa1.33□□□□□ -2.2
GNPTAB-205ENST00000549738 IQGAP1P46940 1657 aa1.33□□□□□ -2.2
GNPTAB-205ENST00000549738 APLNQ9ULZ1 77 aa1.33□□□□□ -2.2
GNPTAB-205ENST00000549738 SPRR1BP22528 89 aa1.32□□□□□ -2.2
GNPTAB-205ENST00000549738 H1FX-AS1Q4G0G2 97 aa1.32□□□□□ -2.2
GNPTAB-205ENST00000549738 DEFB105AQ8NG35 78 aa1.32□□□□□ -2.2
GNPTAB-205ENST00000549738 DDX60Q8IY21 1712 aaKnown RBP1.32□□□□□ -2.2
GNPTAB-205ENST00000549738 CEP350Q5VT06 3117 aa1.31□□□□□ -2.2
GNPTAB-205ENST00000549738 ATP7AQ04656 1500 aa1.31□□□□□ -2.2
GNPTAB-205ENST00000549738 TRIOBPQ9H2D6 2365 aa1.31□□□□□ -2.2
GNPTAB-205ENST00000549738 CNOT1A5YKK6 2376 aaKnown RBP1.3□□□□□ -2.2
GNPTAB-205ENST00000549738 TIMM8BQ9Y5J9 83 aaPredicted RBP1.3□□□□□ -2.2
GNPTAB-205ENST00000549738 CDC42BPAQ5VT25 1732 aa1.29□□□□□ -2.2
GNPTAB-205ENST00000549738 WFDC13Q8IUB5 93 aa1.29□□□□□ -2.2
GNPTAB-205ENST00000549738 TMEM167BQ9NRX6 74 aa1.29□□□□□ -2.2
GNPTAB-205ENST00000549738 LMO7Q8WWI1 1683 aa1.29□□□□□ -2.2
GNPTAB-205ENST00000549738 SPINK4O60575 86 aa1.28□□□□□ -2.2
GNPTAB-205ENST00000549738 LINC00308Q8TCZ7 52 aa1.28□□□□□ -2.2
GNPTAB-205ENST00000549738 PCLOQ9Y6V0 5065 aa1.28□□□□□ -2.21
GNPTAB-205ENST00000549738 NFAT5O94916 1531 aa1.26□□□□□ -2.21
GNPTAB-205ENST00000549738 MINOS1Q5TGZ0 78 aa1.26□□□□□ -2.21
GNPTAB-205ENST00000549738 DOPEY2Q9Y3R5 2298 aa1.25□□□□□ -2.21
GNPTAB-205ENST00000549738 SETXQ7Z333 2677 aaKnown RBP1.25□□□□□ -2.21
GNPTAB-205ENST00000549738 SAMD9LQ8IVG5 1584 aa1.25□□□□□ -2.21
GNPTAB-205ENST00000549738 ALMS1Q8TCU4 4167 aa1.25□□□□□ -2.21
GNPTAB-205ENST00000549738 ZNF462Q96JM2 2506 aa1.24□□□□□ -2.21
GNPTAB-205ENST00000549738 MEGF8Q7Z7M0 2845 aa1.24□□□□□ -2.21
GNPTAB-205ENST00000549738 IAPPP10997 89 aa1.24□□□□□ -2.21
GNPTAB-205ENST00000549738 KLK9Q2XQG4 91 aa1.24□□□□□ -2.21
GNPTAB-205ENST00000549738 C6orf48Q9UBA6 75 aa1.24□□□□□ -2.21
GNPTAB-205ENST00000549738 PTPRZ1P23471 2315 aaPredicted RBP1.24□□□□□ -2.21
GNPTAB-205ENST00000549738 COL6A3P12111 3177 aa1.23□□□□□ -2.21
GNPTAB-205ENST00000549738 PCNTO95613 3336 aa1.23□□□□□ -2.21
GNPTAB-205ENST00000549738 CRCT1Q9UGL9 99 aa1.23□□□□□ -2.21
GNPTAB-205ENST00000549738 MAST4O15021 2626 aa1.23□□□□□ -2.21
GNPTAB-205ENST00000549738 USF3Q68DE3 2245 aa1.23□□□□□ -2.21
GNPTAB-205ENST00000549738 KIF21BO75037 1637 aa1.22□□□□□ -2.21
GNPTAB-205ENST00000549738 PLCE1Q9P212 2302 aa1.22□□□□□ -2.21
GNPTAB-205ENST00000549738 PTPRQQ9UMZ3 2332 aa1.22□□□□□ -2.21
GNPTAB-205ENST00000549738 DEFB130BP0DP73 79 aa1.22□□□□□ -2.21
GNPTAB-205ENST00000549738 DEFB130AP0DP74 79 aa1.22□□□□□ -2.21
GNPTAB-205ENST00000549738 KIAA1109Q2LD37 5005 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms