RNA–Protein interactions for RNA: ENST00000549738.5

GNPTAB-205, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 4

Gene GNPTAB, Length 550 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-205ENST00000549738 AEBP2Q6ZN18 517 aaPredicted RBP18.9■□□□□ 0.62
GNPTAB-205ENST00000549738 CHIC1Q5VXU3 224 aa18.81■□□□□ 0.6
GNPTAB-205ENST00000549738 PHF23Q9BUL5 403 aaPredicted RBP16.62■□□□□ 0.25
GNPTAB-205ENST00000549738 SENP3Q9H4L4 574 aaPredicted RBP15.91■□□□□ 0.14
GNPTAB-205ENST00000549738 PLPPR3Q6T4P5 718 aa15.4■□□□□ 0.06
GNPTAB-205ENST00000549738 FOXD1Q16676 465 aa14.75□□□□□ -0.05
GNPTAB-205ENST00000549738 PPP6R1Q9UPN7 881 aa14.51□□□□□ -0.09
GNPTAB-205ENST00000549738 ADRA2BP18089 450 aa14.48□□□□□ -0.09
GNPTAB-205ENST00000549738 PIAS4Q8N2W9 510 aaPredicted RBP13.94□□□□□ -0.18
GNPTAB-205ENST00000549738 KCNA4P22459 653 aa13.76□□□□□ -0.21
GNPTAB-205ENST00000549738 PPP4R3CPQ6ZMV5 832 aa13.63□□□□□ -0.23
GNPTAB-205ENST00000549738 MSH5O43196 834 aa13.41□□□□□ -0.26
GNPTAB-205ENST00000549738 NCBP3Q53F19 620 aaKnown RBP13.33□□□□□ -0.28
GNPTAB-205ENST00000549738 NPM3O75607 178 aaKnown RBP13.21□□□□□ -0.29
GNPTAB-205ENST00000549738 SCAF1Q9H7N4 1312 aaKnown RBP13.19□□□□□ -0.3
GNPTAB-205ENST00000549738 CNKSR2Q8WXI2 1034 aa13.16□□□□□ -0.3
GNPTAB-205ENST00000549738 EHMT2Q96KQ7 1210 aa13.14□□□□□ -0.31
GNPTAB-205ENST00000549738 SLC4A1APQ9BWU0 796 aaKnown RBP13.13□□□□□ -0.31
GNPTAB-205ENST00000549738 MAPK8IP2Q13387 824 aaPredicted RBP13.02□□□□□ -0.33
GNPTAB-205ENST00000549738 CSRNP3Q8WYN3 585 aa12.94□□□□□ -0.34
GNPTAB-205ENST00000549738 DNAJC5BQ9UF47 199 aa12.9□□□□□ -0.34
GNPTAB-205ENST00000549738 RNF216Q9NWF9 866 aaPredicted RBP12.83□□□□□ -0.36
GNPTAB-205ENST00000549738 DMRT2Q9Y5R5 561 aa12.8□□□□□ -0.36
GNPTAB-205ENST00000549738 ZBTB22O15209 634 aa12.71□□□□□ -0.37
GNPTAB-205ENST00000549738 HOXD11P31277 338 aaPredicted RBP12.71□□□□□ -0.37
GNPTAB-205ENST00000549738 FOXD4L1Q9NU39 408 aa12.54□□□□□ -0.4
GNPTAB-205ENST00000549738 SLC4A2P04920 1241 aa12.41□□□□□ -0.42
GNPTAB-205ENST00000549738 MYCNP04198 464 aaPredicted RBP12.17□□□□□ -0.46
GNPTAB-205ENST00000549738 ATXN8OSP0DMR3 200 aa12.1□□□□□ -0.47
GNPTAB-205ENST00000549738 DCAF8L1A6NGE4 600 aa12.05□□□□□ -0.48
GNPTAB-205ENST00000549738 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.98□□□□□ -0.49
GNPTAB-205ENST00000549738 U3KPZ7 1027 aaPredicted RBP11.93□□□□□ -0.5
GNPTAB-205ENST00000549738 ATF5Q9Y2D1 282 aaPredicted RBP11.85□□□□□ -0.51
GNPTAB-205ENST00000549738 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.84□□□□□ -0.51
GNPTAB-205ENST00000549738 HNRNPUL2Q1KMD3 747 aaKnown RBP11.84□□□□□ -0.51
GNPTAB-205ENST00000549738 SAMD1Q6SPF0 538 aaPredicted RBP11.83□□□□□ -0.52
GNPTAB-205ENST00000549738 POTEDQ86YR6 584 aa11.7□□□□□ -0.54
GNPTAB-205ENST00000549738 APLP2Q06481 763 aa11.6□□□□□ -0.55
GNPTAB-205ENST00000549738 FKBP8Q14318 412 aa11.59□□□□□ -0.55
GNPTAB-205ENST00000549738 ZNF219Q9P2Y4 722 aaPredicted RBP11.58□□□□□ -0.56
GNPTAB-205ENST00000549738 RNF39Q9H2S5 420 aa11.57□□□□□ -0.56
GNPTAB-205ENST00000549738 SPINK5Q9NQ38 1064 aaPredicted RBP11.46□□□□□ -0.57
GNPTAB-205ENST00000549738 C1QBPQ07021 282 aaKnown RBP11.43□□□□□ -0.58
GNPTAB-205ENST00000549738 MKRN4PQ13434 485 aaPredicted RBP11.38□□□□□ -0.59
GNPTAB-205ENST00000549738 TRHP20396 242 aaPredicted RBP11.35□□□□□ -0.59
GNPTAB-205ENST00000549738 CAPN15O75808 1086 aa11.31□□□□□ -0.6
GNPTAB-205ENST00000549738 POLA2Q14181 598 aa11.3□□□□□ -0.6
GNPTAB-205ENST00000549738 AMER1Q5JTC6 1135 aaPredicted RBP11.26□□□□□ -0.61
GNPTAB-205ENST00000549738 RTN4Q9NQC3 1192 aaKnown RBP11.26□□□□□ -0.61
GNPTAB-205ENST00000549738 SPDYE4A6NLX3 237 aa11.23□□□□□ -0.61
GNPTAB-205ENST00000549738 PROM2Q8N271 834 aa11.23□□□□□ -0.61
GNPTAB-205ENST00000549738 FBLN2P98095 1184 aa11.22□□□□□ -0.61
GNPTAB-205ENST00000549738 ABCB7O75027 752 aa11.15□□□□□ -0.62
GNPTAB-205ENST00000549738 DSG3P32926 999 aa11.14□□□□□ -0.63
GNPTAB-205ENST00000549738 ZBTB12Q9Y330 459 aaPredicted RBP11.14□□□□□ -0.63
GNPTAB-205ENST00000549738 FBXO3Q9UK99 471 aa11.07□□□□□ -0.64
GNPTAB-205ENST00000549738 VASPP50552 380 aaPredicted RBP10.95□□□□□ -0.66
GNPTAB-205ENST00000549738 SPDYE2BA6NHP3 402 aa10.91□□□□□ -0.66
GNPTAB-205ENST00000549738 SPDYE6P0CI01 402 aa10.91□□□□□ -0.66
GNPTAB-205ENST00000549738 SPDYE2Q495Y8 402 aa10.91□□□□□ -0.66
GNPTAB-205ENST00000549738 OSCARQ8IYS5 282 aa10.91□□□□□ -0.66
GNPTAB-205ENST00000549738 SSUH2Q9Y2M2 353 aa10.91□□□□□ -0.66
GNPTAB-205ENST00000549738 CACNB1Q02641 598 aaPredicted RBP10.89□□□□□ -0.67
GNPTAB-205ENST00000549738 ZNF692Q9BU19 519 aaPredicted RBP10.87□□□□□ -0.67
GNPTAB-205ENST00000549738 IFNLR1Q8IU57 520 aaPredicted RBP10.85□□□□□ -0.67
GNPTAB-205ENST00000549738 SLC24A1O60721 1099 aa10.77□□□□□ -0.69
GNPTAB-205ENST00000549738 PABPN1Q86U42 306 aaKnown RBP eCLIP10.76□□□□□ -0.69
GNPTAB-205ENST00000549738 STAG3Q9UJ98 1225 aa10.75□□□□□ -0.69
GNPTAB-205ENST00000549738 PKD2Q13563 968 aa10.66□□□□□ -0.7
GNPTAB-205ENST00000549738 SPOCK2Q92563 424 aa10.61□□□□□ -0.71
GNPTAB-205ENST00000549738 PLCD3Q8N3E9 789 aa10.57□□□□□ -0.72
GNPTAB-205ENST00000549738 KLHL34Q8N239 644 aa10.56□□□□□ -0.72
GNPTAB-205ENST00000549738 MIER1Q8N108 512 aa10.55□□□□□ -0.72
GNPTAB-205ENST00000549738 RBM42Q9BTD8 480 aaKnown RBP10.54□□□□□ -0.72
GNPTAB-205ENST00000549738 AKT1S1Q96B36 256 aa10.53□□□□□ -0.72
GNPTAB-205ENST00000549738 SPDYE1Q8NFV5 336 aaPredicted RBP10.46□□□□□ -0.73
GNPTAB-205ENST00000549738 ZBTB47Q9UFB7 747 aaPredicted RBP10.46□□□□□ -0.73
GNPTAB-205ENST00000549738 ECM2O94769 699 aaPredicted RBP10.43□□□□□ -0.74
GNPTAB-205ENST00000549738 REM2Q8IYK8 340 aaPredicted RBP10.43□□□□□ -0.74
GNPTAB-205ENST00000549738 PLEKHG5O94827 1062 aa10.42□□□□□ -0.74
GNPTAB-205ENST00000549738 PLCB2Q00722 1185 aa10.42□□□□□ -0.74
GNPTAB-205ENST00000549738 RGL2O15211 777 aa10.37□□□□□ -0.75
GNPTAB-205ENST00000549738 CREBZFQ9NS37 354 aa10.37□□□□□ -0.75
GNPTAB-205ENST00000549738 MNX1P50219 401 aaPredicted RBP10.36□□□□□ -0.75
GNPTAB-205ENST00000549738 NUBP1P53384 320 aa10.36□□□□□ -0.75
GNPTAB-205ENST00000549738 DCAF8L2P0C7V8 631 aa10.35□□□□□ -0.75
GNPTAB-205ENST00000549738 NPM1P06748 294 aaKnown RBP eCLIP10.33□□□□□ -0.76
GNPTAB-205ENST00000549738 PRR29P0C7W0 189 aa10.33□□□□□ -0.76
GNPTAB-205ENST00000549738 CLEC11AQ9Y240 323 aa10.33□□□□□ -0.76
GNPTAB-205ENST00000549738 TRIM41Q8WV44 630 aa10.32□□□□□ -0.76
GNPTAB-205ENST00000549738 CIZ1Q9ULV3 898 aaPredicted RBP10.31□□□□□ -0.76
GNPTAB-205ENST00000549738 PITPNM1O00562 1244 aa10.3□□□□□ -0.76
GNPTAB-205ENST00000549738 BBXQ8WY36 941 aaPredicted RBP10.29□□□□□ -0.76
GNPTAB-205ENST00000549738 GSE1Q14687 1217 aa10.28□□□□□ -0.76
GNPTAB-205ENST00000549738 RNF25Q96BH1 459 aaPredicted RBP10.23□□□□□ -0.77
GNPTAB-205ENST00000549738 RASEFQ8IZ41 740 aa10.19□□□□□ -0.78
GNPTAB-205ENST00000549738 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.19□□□□□ -0.78
GNPTAB-205ENST00000549738 HAP1P54257 671 aaPredicted RBP10.18□□□□□ -0.78
GNPTAB-205ENST00000549738 DCAF8Q5TAQ9 597 aa10.18□□□□□ -0.78
GNPTAB-205ENST00000549738 CHRM1P11229 460 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms