RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 HIVEP2P31629 2446 aa2.95□□□□□ -1.94
NPAS3-204ENST00000546849 HERC2O95714 4834 aa2.94□□□□□ -1.94
NPAS3-204ENST00000546849 TRAV12-2A0A075B6T6 113 aa2.94□□□□□ -1.94
NPAS3-204ENST00000546849 TRGV4A0A0C4DH28 118 aa2.94□□□□□ -1.94
NPAS3-204ENST00000546849 TRBV10-2A0A0K0K1G8 114 aa2.94□□□□□ -1.94
NPAS3-204ENST00000546849 TRBV6-4A0A1B0GX49 114 aa2.94□□□□□ -1.94
NPAS3-204ENST00000546849 H0YGX0 51 aa2.94□□□□□ -1.94
NPAS3-204ENST00000546849 NDUFA1O15239 70 aa2.94□□□□□ -1.94
NPAS3-204ENST00000546849 ATP5G1P05496 136 aa2.94□□□□□ -1.94
NPAS3-204ENST00000546849 IGHV3-30-3P0DP02 117 aa2.94□□□□□ -1.94
NPAS3-204ENST00000546849 ZNF22P17026 224 aaPredicted RBP2.94□□□□□ -1.94
NPAS3-204ENST00000546849 UBE2D3P61077 147 aa2.94□□□□□ -1.94
NPAS3-204ENST00000546849 UBE2D2P62837 147 aa2.94□□□□□ -1.94
NPAS3-204ENST00000546849 MIAQ16674 131 aa2.94□□□□□ -1.94
NPAS3-204ENST00000546849 DEFB114Q30KQ6 69 aa2.94□□□□□ -1.94
NPAS3-204ENST00000546849 ETDBQ3ZM63 59 aa2.94□□□□□ -1.94
NPAS3-204ENST00000546849 MEIG1Q5JSS6 88 aa2.94□□□□□ -1.94
NPAS3-204ENST00000546849 CFAP126Q5VTH2 177 aa2.94□□□□□ -1.94
NPAS3-204ENST00000546849 ANKRD29Q8N6D5 301 aa2.94□□□□□ -1.94
NPAS3-204ENST00000546849 TRGV1A0A0A0MS02 117 aa2.93□□□□□ -1.94
NPAS3-204ENST00000546849 SS18Q15532 418 aa2.93□□□□□ -1.94
NPAS3-204ENST00000546849 C2orf82Q6UX34 121 aa2.93□□□□□ -1.94
NPAS3-204ENST00000546849 Q6ZQT7 251 aa2.93□□□□□ -1.94
NPAS3-204ENST00000546849 UBE2WQ96B02 151 aa2.93□□□□□ -1.94
NPAS3-204ENST00000546849 C16orf95Q9H693 158 aa2.93□□□□□ -1.94
NPAS3-204ENST00000546849 RBM12B-AS1Q9P1G2 102 aa2.93□□□□□ -1.94
NPAS3-204ENST00000546849 TENM3Q9P273 2699 aa2.93□□□□□ -1.94
NPAS3-204ENST00000546849 ANK3Q12955 4377 aaKnown RBP2.92□□□□□ -1.94
NPAS3-204ENST00000546849 A0A1B0GX51 115 aa2.92□□□□□ -1.94
NPAS3-204ENST00000546849 C9JAW5 83 aa2.92□□□□□ -1.94
NPAS3-204ENST00000546849 K7ERJ3 54 aa2.92□□□□□ -1.94
NPAS3-204ENST00000546849 TRACP01848 142 aa2.92□□□□□ -1.94
NPAS3-204ENST00000546849 CRPP02741 224 aa2.92□□□□□ -1.94
NPAS3-204ENST00000546849 SPINK8P0C7L1 97 aa2.92□□□□□ -1.94
NPAS3-204ENST00000546849 RPL39P62891 51 aaKnown RBP2.92□□□□□ -1.94
NPAS3-204ENST00000546849 WFDC2Q14508 124 aa2.92□□□□□ -1.94
NPAS3-204ENST00000546849 Q6Q795 121 aa2.92□□□□□ -1.94
NPAS3-204ENST00000546849 AMTNQ6UX39 209 aa2.92□□□□□ -1.94
NPAS3-204ENST00000546849 FAM19A3Q7Z5A8 133 aa2.92□□□□□ -1.94
NPAS3-204ENST00000546849 MUSTN1Q8IVN3 82 aa2.92□□□□□ -1.94
NPAS3-204ENST00000546849 C3orf22Q8N5N4 141 aa2.92□□□□□ -1.94
NPAS3-204ENST00000546849 ZNRF2Q8NHG8 242 aa2.92□□□□□ -1.94
NPAS3-204ENST00000546849 LINC01600Q96MT4 127 aa2.92□□□□□ -1.94
NPAS3-204ENST00000546849 IMUPQ9GZP8 106 aa2.92□□□□□ -1.94
NPAS3-204ENST00000546849 UBE2D4Q9Y2X8 147 aa2.92□□□□□ -1.94
NPAS3-204ENST00000546849 KNCNA6PVL3 124 aa2.91□□□□□ -1.94
NPAS3-204ENST00000546849 IBA57-AS1B1ANH7 110 aa2.91□□□□□ -1.94
NPAS3-204ENST00000546849 IGHV3-33P01772 117 aa2.91□□□□□ -1.94
NPAS3-204ENST00000546849 COX17Q14061 63 aa2.91□□□□□ -1.94
NPAS3-204ENST00000546849 KRTAP25-1Q3LHN0 102 aa2.91□□□□□ -1.94
NPAS3-204ENST00000546849 SBSPONQ8IVN8 264 aa2.91□□□□□ -1.94
NPAS3-204ENST00000546849 HIGD2AQ9BW72 106 aa2.91□□□□□ -1.94
NPAS3-204ENST00000546849 TRAV8-3A0A0A6YYJ7 113 aa2.9□□□□□ -1.95
NPAS3-204ENST00000546849 A6NED7 52 aa2.9□□□□□ -1.95
NPAS3-204ENST00000546849 H7C2G1 150 aa2.9□□□□□ -1.95
NPAS3-204ENST00000546849 COX7A2LO14548 114 aa2.9□□□□□ -1.95
NPAS3-204ENST00000546849 PSCAO43653 123 aa2.9□□□□□ -1.95
NPAS3-204ENST00000546849 TCL1BO95988 128 aa2.9□□□□□ -1.95
NPAS3-204ENST00000546849 EMP1P54849 157 aa2.9□□□□□ -1.95
NPAS3-204ENST00000546849 OR13C6PQ8NH95 151 aa2.9□□□□□ -1.95
NPAS3-204ENST00000546849 NAA38Q9BRA0 125 aaKnown RBP2.9□□□□□ -1.95
NPAS3-204ENST00000546849 TTTY13Q9BZ97 58 aa2.9□□□□□ -1.95
NPAS3-204ENST00000546849 ZANQ9Y493 2812 aa2.9□□□□□ -1.95
NPAS3-204ENST00000546849 A0A096LNT2 108 aa2.89□□□□□ -1.95
NPAS3-204ENST00000546849 IGHV3-73A0A0B4J1V6 119 aa2.89□□□□□ -1.95
NPAS3-204ENST00000546849 TRAV13-1A0A0B4J241 112 aa2.89□□□□□ -1.95
NPAS3-204ENST00000546849 JMJD7-PLA2G4BH0Y9G9 81 aa2.89□□□□□ -1.95
NPAS3-204ENST00000546849 LST1O00453 97 aa2.89□□□□□ -1.95
NPAS3-204ENST00000546849 PDE6GP18545 87 aa2.89□□□□□ -1.95
NPAS3-204ENST00000546849 LINC00158P58513 81 aa2.89□□□□□ -1.95
NPAS3-204ENST00000546849 FAM19A5Q7Z5A7 132 aaPredicted RBP2.89□□□□□ -1.95
NPAS3-204ENST00000546849 COX7B2Q8TF08 81 aa2.89□□□□□ -1.95
NPAS3-204ENST00000546849 CDC42SE2Q9NRR3 84 aa2.89□□□□□ -1.95
NPAS3-204ENST00000546849 PRO0255Q9UI72 69 aa2.89□□□□□ -1.95
NPAS3-204ENST00000546849 IGHV3-64A0A075B6Q5 118 aa2.88□□□□□ -1.95
NPAS3-204ENST00000546849 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.88□□□□□ -1.95
NPAS3-204ENST00000546849 TRBV6-8A0A0A6YYG3 113 aa2.88□□□□□ -1.95
NPAS3-204ENST00000546849 IGKV2-29A2NJV5 120 aaPredicted RBP2.88□□□□□ -1.95
NPAS3-204ENST00000546849 TMEM256-PLSCR3K7ERE1 68 aa2.88□□□□□ -1.95
NPAS3-204ENST00000546849 IGLV1-51P01701 117 aa2.88□□□□□ -1.95
NPAS3-204ENST00000546849 PRB4P10163 310 aaPredicted RBP2.88□□□□□ -1.95
NPAS3-204ENST00000546849 MIFP14174 115 aa2.88□□□□□ -1.95
NPAS3-204ENST00000546849 C4orf26Q17RF5 130 aa2.88□□□□□ -1.95
NPAS3-204ENST00000546849 ATP5EP2Q5VTU8 51 aa2.88□□□□□ -1.95
NPAS3-204ENST00000546849 Q6ZUT4 128 aa2.88□□□□□ -1.95
NPAS3-204ENST00000546849 LINC00643Q86TS7 51 aa2.88□□□□□ -1.95
NPAS3-204ENST00000546849 DAND5Q8N907 189 aa2.88□□□□□ -1.95
NPAS3-204ENST00000546849 C15orf53Q8NAA6 179 aa2.88□□□□□ -1.95
NPAS3-204ENST00000546849 LINC00308Q8TCZ7 52 aa2.88□□□□□ -1.95
NPAS3-204ENST00000546849 NOP10Q9NPE3 64 aaKnown RBP2.88□□□□□ -1.95
NPAS3-204ENST00000546849 CDKN2A-AS1Q9UH64 79 aa2.88□□□□□ -1.95
NPAS3-204ENST00000546849 MUC4Q99102 2169 aa2.88□□□□□ -1.95
NPAS3-204ENST00000546849 CMYA5Q8N3K9 4069 aa2.88□□□□□ -1.95
NPAS3-204ENST00000546849 RPL28P46779 137 aaKnown RBP2.87□□□□□ -1.95
NPAS3-204ENST00000546849 DEFB136Q30KP8 78 aa2.87□□□□□ -1.95
NPAS3-204ENST00000546849 Q8IZM0 81 aa2.87□□□□□ -1.95
NPAS3-204ENST00000546849 TMEM126AQ9H061 195 aa2.87□□□□□ -1.95
NPAS3-204ENST00000546849 ORMDL1Q9P0S3 153 aa2.87□□□□□ -1.95
NPAS3-204ENST00000546849 A8MWP4 228 aa2.86□□□□□ -1.95
NPAS3-204ENST00000546849 NDUFC2O95298 119 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms