RNA–Protein interactions for RNA: ENST00000517276.1

SCARNA11.3-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 130 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.3-201ENST00000517276 KRTAP2-3P0C7H8 128 aa0.62□□□□□ -2.31
SCARNA11.3-201ENST00000517276 SMIM5Q71RC9 77 aa0.62□□□□□ -2.31
SCARNA11.3-201ENST00000517276 KRTAP2-4Q9BYR9 128 aa0.62□□□□□ -2.31
SCARNA11.3-201ENST00000517276 KRTAP2-1Q9BYU5 128 aa0.62□□□□□ -2.31
SCARNA11.3-201ENST00000517276 TPRP12270 2363 aaKnown RBP0.62□□□□□ -2.31
SCARNA11.3-201ENST00000517276 NHSQ6T4R5 1651 aa0.62□□□□□ -2.31
SCARNA11.3-201ENST00000517276 CHD9Q3L8U1 2897 aa0.62□□□□□ -2.31
SCARNA11.3-201ENST00000517276 GLI2P10070 1586 aa0.62□□□□□ -2.31
SCARNA11.3-201ENST00000517276 AKAP6Q13023 2319 aa0.61□□□□□ -2.31
SCARNA11.3-201ENST00000517276 ABCA6Q8N139 1617 aa0.61□□□□□ -2.31
SCARNA11.3-201ENST00000517276 KRTAP5-9P26371 169 aa0.61□□□□□ -2.31
SCARNA11.3-201ENST00000517276 SPINK6Q6UWN8 80 aa0.61□□□□□ -2.31
SCARNA11.3-201ENST00000517276 WFDC13Q8IUB5 93 aa0.61□□□□□ -2.31
SCARNA11.3-201ENST00000517276 TNRC6CQ9HCJ0 1690 aaKnown RBP0.61□□□□□ -2.31
SCARNA11.3-201ENST00000517276 ZNF469Q96JG9 3925 aaPredicted RBP0.6□□□□□ -2.31
SCARNA11.3-201ENST00000517276 FBN3Q75N90 2809 aa0.6□□□□□ -2.31
SCARNA11.3-201ENST00000517276 K7EMI3 77 aa0.6□□□□□ -2.31
SCARNA11.3-201ENST00000517276 DEFB109BQ30KR1 87 aa0.6□□□□□ -2.31
SCARNA11.3-201ENST00000517276 KCNQ1DNQ9H478 68 aa0.6□□□□□ -2.31
SCARNA11.3-201ENST00000517276 CDKN2A-AS1Q9UH64 79 aa0.6□□□□□ -2.31
SCARNA11.3-201ENST00000517276 PKDREJQ9NTG1 2253 aa0.6□□□□□ -2.31
SCARNA11.3-201ENST00000517276 CELSR2Q9HCU4 2923 aa0.6□□□□□ -2.31
SCARNA11.3-201ENST00000517276 TENM1Q9UKZ4 2725 aa0.59□□□□□ -2.31
SCARNA11.3-201ENST00000517276 APCP25054 2843 aa0.59□□□□□ -2.31
SCARNA11.3-201ENST00000517276 ETDCA0A1B0GVM5 59 aa0.59□□□□□ -2.31
SCARNA11.3-201ENST00000517276 FCER1GP30273 86 aa0.59□□□□□ -2.31
SCARNA11.3-201ENST00000517276 CRIP1P50238 77 aa0.59□□□□□ -2.31
SCARNA11.3-201ENST00000517276 CSMD3Q7Z407 3707 aa0.59□□□□□ -2.32
SCARNA11.3-201ENST00000517276 FBN2P35556 2912 aa0.58□□□□□ -2.32
SCARNA11.3-201ENST00000517276 TJP1Q07157 1748 aa0.58□□□□□ -2.32
SCARNA11.3-201ENST00000517276 TIAM1Q13009 1591 aa0.58□□□□□ -2.32
SCARNA11.3-201ENST00000517276 PRH1P02810 166 aa0.58□□□□□ -2.32
SCARNA11.3-201ENST00000517276 LINC00158P58513 81 aa0.58□□□□□ -2.32
SCARNA11.3-201ENST00000517276 PRO3102Q9H379 93 aa0.58□□□□□ -2.32
SCARNA11.3-201ENST00000517276 DDX60LQ5H9U9 1706 aaKnown RBP0.58□□□□□ -2.32
SCARNA11.3-201ENST00000517276 PRXQ9BXM0 1461 aa0.57□□□□□ -2.32
SCARNA11.3-201ENST00000517276 DEFB131BA0A096LNP1 70 aa0.57□□□□□ -2.32
SCARNA11.3-201ENST00000517276 KRTAP21-2Q3LI59 83 aa0.57□□□□□ -2.32
SCARNA11.3-201ENST00000517276 COX6B2Q6YFQ2 88 aa0.57□□□□□ -2.32
SCARNA11.3-201ENST00000517276 KNL1Q8NG31 2342 aa0.56□□□□□ -2.32
SCARNA11.3-201ENST00000517276 LOC730098B7Z3J9 87 aa0.56□□□□□ -2.32
SCARNA11.3-201ENST00000517276 H0YAA0 97 aa0.56□□□□□ -2.32
SCARNA11.3-201ENST00000517276 SPINK4O60575 86 aa0.56□□□□□ -2.32
SCARNA11.3-201ENST00000517276 PLXNC1O60486 1568 aa0.56□□□□□ -2.32
SCARNA11.3-201ENST00000517276 EEA1Q15075 1411 aa0.55□□□□□ -2.32
SCARNA11.3-201ENST00000517276 C4AP0C0L4 1744 aa0.55□□□□□ -2.32
SCARNA11.3-201ENST00000517276 C4BP0C0L5 1744 aa0.55□□□□□ -2.32
SCARNA11.3-201ENST00000517276 ABCC6O95255 1503 aa0.55□□□□□ -2.32
SCARNA11.3-201ENST00000517276 CPS1P31327 1500 aa0.55□□□□□ -2.32
SCARNA11.3-201ENST00000517276 THOC2Q8NI27 1593 aaKnown RBP0.55□□□□□ -2.32
SCARNA11.3-201ENST00000517276 M0R1W7 72 aa0.55□□□□□ -2.32
SCARNA11.3-201ENST00000517276 SMR3AQ99954 134 aa0.55□□□□□ -2.32
SCARNA11.3-201ENST00000517276 NOTCH1P46531 2555 aa0.55□□□□□ -2.32
SCARNA11.3-201ENST00000517276 REV3LO60673 3130 aa0.54□□□□□ -2.32
SCARNA11.3-201ENST00000517276 PREX2Q70Z35 1606 aa0.54□□□□□ -2.32
SCARNA11.3-201ENST00000517276 ALS2Q96Q42 1657 aa0.54□□□□□ -2.32
SCARNA11.3-201ENST00000517276 MRPL33O75394 65 aaKnown RBP0.54□□□□□ -2.32
SCARNA11.3-201ENST00000517276 IGF2RP11717 2491 aa0.54□□□□□ -2.32
SCARNA11.3-201ENST00000517276 UGGT1Q9NYU2 1555 aa0.53□□□□□ -2.32
SCARNA11.3-201ENST00000517276 FCGBPQ9Y6R7 5405 aaPredicted RBP0.53□□□□□ -2.32
SCARNA11.3-201ENST00000517276 CHD6Q8TD26 2715 aa0.53□□□□□ -2.32
SCARNA11.3-201ENST00000517276 DEFB114Q30KQ6 69 aa0.53□□□□□ -2.32
SCARNA11.3-201ENST00000517276 CRCT1Q9UGL9 99 aa0.53□□□□□ -2.32
SCARNA11.3-201ENST00000517276 ABCA10Q8WWZ4 1543 aa0.53□□□□□ -2.33
SCARNA11.3-201ENST00000517276 NCOR1O75376 2440 aa0.53□□□□□ -2.33
SCARNA11.3-201ENST00000517276 RNF17Q9BXT8 1623 aaKnown RBP0.53□□□□□ -2.33
SCARNA11.3-201ENST00000517276 ALMS1Q8TCU4 4167 aa0.52□□□□□ -2.33
SCARNA11.3-201ENST00000517276 KRTAP5-8O75690 187 aa0.52□□□□□ -2.33
SCARNA11.3-201ENST00000517276 SPINK1P00995 79 aa0.52□□□□□ -2.33
SCARNA11.3-201ENST00000517276 ATRQ13535 2644 aa0.52□□□□□ -2.33
SCARNA11.3-201ENST00000517276 CSPG4Q6UVK1 2322 aa0.52□□□□□ -2.33
SCARNA11.3-201ENST00000517276 ZFYVE26Q68DK2 2539 aa0.52□□□□□ -2.33
SCARNA11.3-201ENST00000517276 NCBP2-AS2Q69YL0 99 aa0.51□□□□□ -2.33
SCARNA11.3-201ENST00000517276 BSNQ9UPA5 3926 aa0.51□□□□□ -2.33
SCARNA11.3-201ENST00000517276 SPTA1P02549 2419 aa0.5□□□□□ -2.33
SCARNA11.3-201ENST00000517276 C3P01024 1663 aa0.5□□□□□ -2.33
SCARNA11.3-201ENST00000517276 FAT2Q9NYQ8 4349 aa0.5□□□□□ -2.33
SCARNA11.3-201ENST00000517276 NMES1Q9C002 83 aa0.5□□□□□ -2.33
SCARNA11.3-201ENST00000517276 WNK2Q9Y3S1 2297 aa0.5□□□□□ -2.33
SCARNA11.3-201ENST00000517276 VWFP04275 2813 aa0.5□□□□□ -2.33
SCARNA11.3-201ENST00000517276 PDE4DIPQ5VU43 2346 aa0.49□□□□□ -2.33
SCARNA11.3-201ENST00000517276 DEFB130BP0DP73 79 aa0.49□□□□□ -2.33
SCARNA11.3-201ENST00000517276 DEFB130AP0DP74 79 aa0.49□□□□□ -2.33
SCARNA11.3-201ENST00000517276 IAPPP10997 89 aa0.49□□□□□ -2.33
SCARNA11.3-201ENST00000517276 KRTAP5-2Q701N4 177 aa0.49□□□□□ -2.33
SCARNA11.3-201ENST00000517276 U3KQA8 63 aa0.49□□□□□ -2.33
SCARNA11.3-201ENST00000517276 PRKDCP78527 4128 aaKnown RBP0.49□□□□□ -2.33
SCARNA11.3-201ENST00000517276 MROH2AA6NES4 1674 aa0.49□□□□□ -2.33
SCARNA11.3-201ENST00000517276 KIF1AQ12756 1690 aa0.49□□□□□ -2.33
SCARNA11.3-201ENST00000517276 TENM4Q6N022 2769 aa0.49□□□□□ -2.33
SCARNA11.3-201ENST00000517276 SYNE1Q8NF91 8797 aaKnown RBP0.48□□□□□ -2.33
SCARNA11.3-201ENST00000517276 ABCA2Q9BZC7 2435 aa0.48□□□□□ -2.33
SCARNA11.3-201ENST00000517276 LY75O60449 1722 aa0.48□□□□□ -2.33
SCARNA11.3-201ENST00000517276 IGIPA6NJ69 53 aa0.48□□□□□ -2.33
SCARNA11.3-201ENST00000517276 LYNX1G3V0Z9 82 aa0.48□□□□□ -2.33
SCARNA11.3-201ENST00000517276 KRTAP4-1Q9BYQ7 146 aa0.48□□□□□ -2.33
SCARNA11.3-201ENST00000517276 ITSN2Q9NZM3 1697 aa0.48□□□□□ -2.33
SCARNA11.3-201ENST00000517276 BPTFQ12830 3046 aa0.48□□□□□ -2.33
SCARNA11.3-201ENST00000517276 LRP1Q07954 4544 aaKnown RBP0.47□□□□□ -2.33
SCARNA11.3-201ENST00000517276 MINOS1Q5TGZ0 78 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms