RNA–Protein interactions for RNA: ENST00000513450.1

RNF4-219, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-219ENST00000513450 Q8IZM0 81 aa0.38□□□□□ -2.35
RNF4-219ENST00000513450 MRPL34Q9BQ48 92 aaKnown RBP0.38□□□□□ -2.35
RNF4-219ENST00000513450 KRTAP2-4Q9BYR9 128 aa0.38□□□□□ -2.35
RNF4-219ENST00000513450 KRTAP2-1Q9BYU5 128 aa0.38□□□□□ -2.35
RNF4-219ENST00000513450 GNG13Q9P2W3 67 aa0.38□□□□□ -2.35
RNF4-219ENST00000513450 FBN2P35556 2912 aa0.38□□□□□ -2.35
RNF4-219ENST00000513450 CACNA1AO00555 2505 aa0.38□□□□□ -2.35
RNF4-219ENST00000513450 ANKRD50Q9ULJ7 1429 aa0.38□□□□□ -2.35
RNF4-219ENST00000513450 ZNF292O60281 2723 aa0.37□□□□□ -2.35
RNF4-219ENST00000513450 GVINP1Q7Z2Y8 2422 aa0.37□□□□□ -2.35
RNF4-219ENST00000513450 NHSQ6T4R5 1651 aa0.37□□□□□ -2.35
RNF4-219ENST00000513450 NWD1Q149M9 1564 aa0.37□□□□□ -2.35
RNF4-219ENST00000513450 LINC01549A6NIU2 74 aa0.37□□□□□ -2.35
RNF4-219ENST00000513450 SPRR1BP22528 89 aa0.37□□□□□ -2.35
RNF4-219ENST00000513450 BIVM-ERCC5R4GMW8 1640 aa0.37□□□□□ -2.35
RNF4-219ENST00000513450 FAT2Q9NYQ8 4349 aa0.37□□□□□ -2.35
RNF4-219ENST00000513450 ALMS1Q8TCU4 4167 aa0.36□□□□□ -2.35
RNF4-219ENST00000513450 NOTCH1P46531 2555 aa0.36□□□□□ -2.35
RNF4-219ENST00000513450 I3L3M4 83 aa0.36□□□□□ -2.35
RNF4-219ENST00000513450 K7EMI3 77 aa0.36□□□□□ -2.35
RNF4-219ENST00000513450 NDUFA3O95167 84 aa0.36□□□□□ -2.35
RNF4-219ENST00000513450 KLK9Q2XQG4 91 aa0.36□□□□□ -2.35
RNF4-219ENST00000513450 H1FX-AS1Q4G0G2 97 aa0.36□□□□□ -2.35
RNF4-219ENST00000513450 APLNQ9ULZ1 77 aa0.36□□□□□ -2.35
RNF4-219ENST00000513450 BDP1A6H8Y1 2624 aa0.36□□□□□ -2.35
RNF4-219ENST00000513450 CELSR2Q9HCU4 2923 aa0.36□□□□□ -2.35
RNF4-219ENST00000513450 ABCA12Q86UK0 2595 aa0.36□□□□□ -2.35
RNF4-219ENST00000513450 ALS2Q96Q42 1657 aa0.35□□□□□ -2.35
RNF4-219ENST00000513450 COX6B1P14854 86 aa0.35□□□□□ -2.35
RNF4-219ENST00000513450 CRIP1P50238 77 aa0.35□□□□□ -2.35
RNF4-219ENST00000513450 Q5VSD8 79 aa0.35□□□□□ -2.35
RNF4-219ENST00000513450 USMG5Q96IX5 58 aa0.35□□□□□ -2.35
RNF4-219ENST00000513450 GPR98Q8WXG9 6306 aa0.35□□□□□ -2.35
RNF4-219ENST00000513450 PREX2Q70Z35 1606 aa0.35□□□□□ -2.35
RNF4-219ENST00000513450 TNRC6CQ9HCJ0 1690 aaKnown RBP0.34□□□□□ -2.35
RNF4-219ENST00000513450 ITSN2Q9NZM3 1697 aa0.34□□□□□ -2.35
RNF4-219ENST00000513450 LOC730098B7Z3J9 87 aa0.34□□□□□ -2.36
RNF4-219ENST00000513450 PLXNC1O60486 1568 aa0.34□□□□□ -2.36
RNF4-219ENST00000513450 TIAM1Q13009 1591 aa0.34□□□□□ -2.36
RNF4-219ENST00000513450 DDX60LQ5H9U9 1706 aaKnown RBP0.34□□□□□ -2.36
RNF4-219ENST00000513450 KNL1Q8NG31 2342 aa0.34□□□□□ -2.36
RNF4-219ENST00000513450 DEFB105AQ8NG35 78 aa0.34□□□□□ -2.36
RNF4-219ENST00000513450 PRO3102Q9H379 93 aa0.34□□□□□ -2.36
RNF4-219ENST00000513450 KCNQ1DNQ9H478 68 aa0.34□□□□□ -2.36
RNF4-219ENST00000513450 TPRP12270 2363 aaKnown RBP0.34□□□□□ -2.36
RNF4-219ENST00000513450 RNF17Q9BXT8 1623 aaKnown RBP0.34□□□□□ -2.36
RNF4-219ENST00000513450 AKAP6Q13023 2319 aa0.33□□□□□ -2.36
RNF4-219ENST00000513450 ABCC6O95255 1503 aa0.33□□□□□ -2.36
RNF4-219ENST00000513450 CHD9Q3L8U1 2897 aa0.33□□□□□ -2.36
RNF4-219ENST00000513450 NCOR1O75376 2440 aa0.33□□□□□ -2.36
RNF4-219ENST00000513450 PKDREJQ9NTG1 2253 aa0.33□□□□□ -2.36
RNF4-219ENST00000513450 REV3LO60673 3130 aa0.33□□□□□ -2.36
RNF4-219ENST00000513450 H0YAA0 97 aa0.33□□□□□ -2.36
RNF4-219ENST00000513450 PRH1P02810 166 aa0.33□□□□□ -2.36
RNF4-219ENST00000513450 PIEZO1Q92508 2521 aa0.33□□□□□ -2.36
RNF4-219ENST00000513450 MROH2AA6NES4 1674 aa0.33□□□□□ -2.36
RNF4-219ENST00000513450 STAB1Q9NY15 2570 aa0.33□□□□□ -2.36
RNF4-219ENST00000513450 AHNAKQ09666 5890 aaKnown RBP0.33□□□□□ -2.36
RNF4-219ENST00000513450 C4AP0C0L4 1744 aa0.33□□□□□ -2.36
RNF4-219ENST00000513450 C4BP0C0L5 1744 aa0.33□□□□□ -2.36
RNF4-219ENST00000513450 PRKDCP78527 4128 aaKnown RBP0.32□□□□□ -2.36
RNF4-219ENST00000513450 APCP25054 2843 aa0.32□□□□□ -2.36
RNF4-219ENST00000513450 RPL38P63173 70 aaKnown RBP0.32□□□□□ -2.36
RNF4-219ENST00000513450 WFDC13Q8IUB5 93 aa0.32□□□□□ -2.36
RNF4-219ENST00000513450 SMR3AQ99954 134 aa0.32□□□□□ -2.36
RNF4-219ENST00000513450 CDKN2A-AS1Q9UH64 79 aa0.32□□□□□ -2.36
RNF4-219ENST00000513450 PRXQ9BXM0 1461 aa0.32□□□□□ -2.36
RNF4-219ENST00000513450 MUC5BQ9HC84 5762 aaPredicted RBP0.32□□□□□ -2.36
RNF4-219ENST00000513450 LYSTQ99698 3801 aa0.32□□□□□ -2.36
RNF4-219ENST00000513450 LY75O60449 1722 aa0.31□□□□□ -2.36
RNF4-219ENST00000513450 DEFB131BA0A096LNP1 70 aa0.31□□□□□ -2.36
RNF4-219ENST00000513450 ETDCA0A1B0GVM5 59 aa0.31□□□□□ -2.36
RNF4-219ENST00000513450 SMIM5Q71RC9 77 aa0.31□□□□□ -2.36
RNF4-219ENST00000513450 UBL5Q9BZL1 73 aa0.31□□□□□ -2.36
RNF4-219ENST00000513450 FXYD6Q9H0Q3 95 aa0.31□□□□□ -2.36
RNF4-219ENST00000513450 UGGT1Q9NYU2 1555 aa0.31□□□□□ -2.36
RNF4-219ENST00000513450 EEA1Q15075 1411 aa0.3□□□□□ -2.36
RNF4-219ENST00000513450 CHD6Q8TD26 2715 aa0.3□□□□□ -2.36
RNF4-219ENST00000513450 VWFP04275 2813 aa0.3□□□□□ -2.36
RNF4-219ENST00000513450 USP9XQ93008 2570 aaPredicted RBP0.3□□□□□ -2.36
RNF4-219ENST00000513450 CSPG4Q6UVK1 2322 aa0.3□□□□□ -2.36
RNF4-219ENST00000513450 CPS1P31327 1500 aa0.3□□□□□ -2.36
RNF4-219ENST00000513450 CLASP1Q7Z460 1538 aa0.3□□□□□ -2.36
RNF4-219ENST00000513450 TRANK1O15050 2925 aa0.3□□□□□ -2.36
RNF4-219ENST00000513450 M0R1W7 72 aa0.3□□□□□ -2.36
RNF4-219ENST00000513450 CCL22O00626 93 aa0.3□□□□□ -2.36
RNF4-219ENST00000513450 FCER1GP30273 86 aa0.3□□□□□ -2.36
RNF4-219ENST00000513450 LINC00158P58513 81 aa0.3□□□□□ -2.36
RNF4-219ENST00000513450 NAV2Q8IVL1 2488 aa0.3□□□□□ -2.36
RNF4-219ENST00000513450 SETD2Q9BYW2 2564 aaPredicted RBP0.3□□□□□ -2.36
RNF4-219ENST00000513450 WNK2Q9Y3S1 2297 aa0.3□□□□□ -2.36
RNF4-219ENST00000513450 C3P01024 1663 aa0.3□□□□□ -2.36
RNF4-219ENST00000513450 BPTFQ12830 3046 aa0.3□□□□□ -2.36
RNF4-219ENST00000513450 IGF2RP11717 2491 aa0.29□□□□□ -2.36
RNF4-219ENST00000513450 ABCA10Q8WWZ4 1543 aa0.29□□□□□ -2.36
RNF4-219ENST00000513450 ATRQ13535 2644 aa0.29□□□□□ -2.36
RNF4-219ENST00000513450 TEP1Q99973 2627 aaKnown RBP0.29□□□□□ -2.36
RNF4-219ENST00000513450 SETXQ7Z333 2677 aaKnown RBP0.29□□□□□ -2.36
RNF4-219ENST00000513450 DEFB109BQ30KR1 87 aa0.29□□□□□ -2.36
RNF4-219ENST00000513450 KRTAP21-1Q3LI58 79 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms