RNA–Protein interactions for RNA: ENST00000511985.1

PDGFC-207, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 725 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-207ENST00000511985 SPRR2BP35325 72 aa0.02□□□□□ -2.41
PDGFC-207ENST00000511985 CD163L1Q9NR16 1453 aa0.02□□□□□ -2.41
PDGFC-207ENST00000511985 MAP3K1Q13233 1512 aa0.02□□□□□ -2.41
PDGFC-207ENST00000511985 PTPN13Q12923 2485 aa0.02□□□□□ -2.41
PDGFC-207ENST00000511985 QSER1Q2KHR3 1735 aa0.01□□□□□ -2.41
PDGFC-207ENST00000511985 PKD1L3Q7Z443 1732 aa0.01□□□□□ -2.41
PDGFC-207ENST00000511985 RGPD2P0DJD1 1756 aa0.01□□□□□ -2.41
PDGFC-207ENST00000511985 A0A087WXM4 84 aa0.01□□□□□ -2.41
PDGFC-207ENST00000511985 NREPQ16612 68 aa0.01□□□□□ -2.41
PDGFC-207ENST00000511985 ALMS1Q8TCU4 4167 aa0.01□□□□□ -2.41
PDGFC-207ENST00000511985 NEBP20929 6669 aa0.01□□□□□ -2.41
PDGFC-207ENST00000511985 MYH4Q9Y623 1939 aa0.01□□□□□ -2.41
PDGFC-207ENST00000511985 ABCA2Q9BZC7 2435 aa0.01□□□□□ -2.41
PDGFC-207ENST00000511985 ZNF292O60281 2723 aa0□□□□□ -2.41
PDGFC-207ENST00000511985 PIK3C2BO00750 1634 aa0□□□□□ -2.41
PDGFC-207ENST00000511985 NWD1Q149M9 1564 aa0□□□□□ -2.41
PDGFC-207ENST00000511985 ZNF831Q5JPB2 1677 aa0□□□□□ -2.41
PDGFC-207ENST00000511985 GVINP1Q7Z2Y8 2422 aa0□□□□□ -2.41
PDGFC-207ENST00000511985 ANKRD50Q9ULJ7 1429 aa0□□□□□ -2.41
PDGFC-207ENST00000511985 WNK2Q9Y3S1 2297 aa0□□□□□ -2.41
PDGFC-207ENST00000511985 RGPD8O14715 1765 aaPredicted RBP-0.01□□□□□ -2.41
PDGFC-207ENST00000511985 RGPD5Q99666 1765 aa-0.01□□□□□ -2.41
PDGFC-207ENST00000511985 NDUFA4O00483 81 aa-0.01□□□□□ -2.41
PDGFC-207ENST00000511985 C3orf79P0CE67 100 aa-0.01□□□□□ -2.41
PDGFC-207ENST00000511985 DEFB135Q30KP9 77 aa-0.01□□□□□ -2.41
PDGFC-207ENST00000511985 PRO3102Q9H379 93 aa-0.02□□□□□ -2.41
PDGFC-207ENST00000511985 HSPG2P98160 4391 aa-0.02□□□□□ -2.41
PDGFC-207ENST00000511985 EP300Q09472 2414 aaPredicted RBP-0.02□□□□□ -2.41
PDGFC-207ENST00000511985 POLR1AO95602 1720 aaPredicted RBP-0.02□□□□□ -2.41
PDGFC-207ENST00000511985 SUPT6HQ7KZ85 1726 aaKnown RBP-0.02□□□□□ -2.41
PDGFC-207ENST00000511985 URB1O60287 2271 aaKnown RBP-0.02□□□□□ -2.41
PDGFC-207ENST00000511985 VWFP04275 2813 aa-0.02□□□□□ -2.41
PDGFC-207ENST00000511985 CHD6Q8TD26 2715 aa-0.02□□□□□ -2.41
PDGFC-207ENST00000511985 CICQ96RK0 1608 aaPredicted RBP-0.02□□□□□ -2.41
PDGFC-207ENST00000511985 PTPN23Q9H3S7 1636 aa-0.02□□□□□ -2.41
PDGFC-207ENST00000511985 FAT2Q9NYQ8 4349 aa-0.02□□□□□ -2.41
PDGFC-207ENST00000511985 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.03□□□□□ -2.41
PDGFC-207ENST00000511985 DOPEY2Q9Y3R5 2298 aa-0.03□□□□□ -2.41
PDGFC-207ENST00000511985 BCORQ6W2J9 1755 aa-0.03□□□□□ -2.41
PDGFC-207ENST00000511985 NCOR1O75376 2440 aa-0.03□□□□□ -2.41
PDGFC-207ENST00000511985 ABCA8O94911 1581 aa-0.03□□□□□ -2.41
PDGFC-207ENST00000511985 LRP1BQ9NZR2 4599 aa-0.03□□□□□ -2.41
PDGFC-207ENST00000511985 DOT1LQ8TEK3 1739 aa-0.04□□□□□ -2.42
PDGFC-207ENST00000511985 WIZO95785 1651 aa-0.04□□□□□ -2.42
PDGFC-207ENST00000511985 LINC00158P58513 81 aa-0.04□□□□□ -2.42
PDGFC-207ENST00000511985 UBR3Q6ZT12 1888 aa-0.04□□□□□ -2.42
PDGFC-207ENST00000511985 KIF20BQ96Q89 1820 aa-0.04□□□□□ -2.42
PDGFC-207ENST00000511985 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.05□□□□□ -2.42
PDGFC-207ENST00000511985 ANKRD36A6QL64 1941 aa-0.05□□□□□ -2.42
PDGFC-207ENST00000511985 PLXNC1O60486 1568 aa-0.05□□□□□ -2.42
PDGFC-207ENST00000511985 ADAMTS12P58397 1594 aa-0.05□□□□□ -2.42
PDGFC-207ENST00000511985 LRP2P98164 4655 aa-0.05□□□□□ -2.42
PDGFC-207ENST00000511985 DEFB131BA0A096LNP1 70 aa-0.05□□□□□ -2.42
PDGFC-207ENST00000511985 LYNX1G3V0Z9 82 aa-0.05□□□□□ -2.42
PDGFC-207ENST00000511985 H0YAA0 97 aa-0.05□□□□□ -2.42
PDGFC-207ENST00000511985 KCNQ1DNQ9H478 68 aa-0.05□□□□□ -2.42
PDGFC-207ENST00000511985 MUC2Q02817 5179 aa-0.05□□□□□ -2.42
PDGFC-207ENST00000511985 MUC12Q9UKN1 5478 aa-0.06□□□□□ -2.42
PDGFC-207ENST00000511985 LTN1O94822 1766 aa-0.06□□□□□ -2.42
PDGFC-207ENST00000511985 COL14A1Q05707 1796 aaKnown RBP-0.06□□□□□ -2.42
PDGFC-207ENST00000511985 SMCO4Q9NRQ5 59 aa-0.06□□□□□ -2.42
PDGFC-207ENST00000511985 FLNCQ14315 2725 aa-0.06□□□□□ -2.42
PDGFC-207ENST00000511985 NESP48681 1621 aa-0.06□□□□□ -2.42
PDGFC-207ENST00000511985 ARFGEF2Q9Y6D5 1785 aa-0.06□□□□□ -2.42
PDGFC-207ENST00000511985 CSPG4Q6UVK1 2322 aa-0.07□□□□□ -2.42
PDGFC-207ENST00000511985 TIAM2Q8IVF5 1701 aa-0.07□□□□□ -2.42
PDGFC-207ENST00000511985 RALGAPBQ86X10 1494 aa-0.07□□□□□ -2.42
PDGFC-207ENST00000511985 PDCD5O14737 125 aa-0.07□□□□□ -2.42
PDGFC-207ENST00000511985 MRPL33O75394 65 aaKnown RBP-0.07□□□□□ -2.42
PDGFC-207ENST00000511985 DEPDC5O75140 1603 aa-0.07□□□□□ -2.42
PDGFC-207ENST00000511985 LMTK2Q8IWU2 1503 aa-0.08□□□□□ -2.42
PDGFC-207ENST00000511985 CHD8Q9HCK8 2581 aa-0.08□□□□□ -2.42
PDGFC-207ENST00000511985 H3BVH4 76 aa-0.08□□□□□ -2.42
PDGFC-207ENST00000511985 SPRR2AP35326 72 aa-0.08□□□□□ -2.42
PDGFC-207ENST00000511985 ENHOQ6UWT2 76 aa-0.08□□□□□ -2.42
PDGFC-207ENST00000511985 UBL5Q9BZL1 73 aa-0.08□□□□□ -2.42
PDGFC-207ENST00000511985 PCLOQ9Y6V0 5065 aa-0.08□□□□□ -2.42
PDGFC-207ENST00000511985 HFM1A2PYH4 1435 aa-0.08□□□□□ -2.42
PDGFC-207ENST00000511985 DUOX2Q9NRD8 1548 aa-0.08□□□□□ -2.42
PDGFC-207ENST00000511985 SPTA1P02549 2419 aa-0.08□□□□□ -2.42
PDGFC-207ENST00000511985 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.09□□□□□ -2.42
PDGFC-207ENST00000511985 ATRQ13535 2644 aa-0.09□□□□□ -2.42
PDGFC-207ENST00000511985 H0YGG7 62 aa-0.09□□□□□ -2.42
PDGFC-207ENST00000511985 NSD1Q96L73 2696 aaPredicted RBP-0.09□□□□□ -2.42
PDGFC-207ENST00000511985 UGGT2Q9NYU1 1516 aa-0.09□□□□□ -2.42
PDGFC-207ENST00000511985 KMT2AQ03164 3969 aa-0.09□□□□□ -2.42
PDGFC-207ENST00000511985 KMT2CQ8NEZ4 4911 aaKnown RBP-0.1□□□□□ -2.42
PDGFC-207ENST00000511985 PRKDCP78527 4128 aaKnown RBP-0.1□□□□□ -2.42
PDGFC-207ENST00000511985 DIP2AQ14689 1571 aa-0.1□□□□□ -2.42
PDGFC-207ENST00000511985 CFAP43Q8NDM7 1665 aa-0.1□□□□□ -2.43
PDGFC-207ENST00000511985 CRIP1P50238 77 aa-0.1□□□□□ -2.43
PDGFC-207ENST00000511985 DEFA5Q01523 94 aa-0.1□□□□□ -2.43
PDGFC-207ENST00000511985 ATXN8Q156A1 80 aa-0.1□□□□□ -2.43
PDGFC-207ENST00000511985 C4AP0C0L4 1744 aa-0.1□□□□□ -2.43
PDGFC-207ENST00000511985 C4BP0C0L5 1744 aa-0.1□□□□□ -2.43
PDGFC-207ENST00000511985 CDC42BPGQ6DT37 1551 aa-0.11□□□□□ -2.43
PDGFC-207ENST00000511985 THOC2Q8NI27 1593 aaKnown RBP-0.11□□□□□ -2.43
PDGFC-207ENST00000511985 DEFB130BP0DP73 79 aa-0.11□□□□□ -2.43
PDGFC-207ENST00000511985 DEFB130AP0DP74 79 aa-0.11□□□□□ -2.43
PDGFC-207ENST00000511985 KRTAP6-1Q3LI64 71 aa-0.11□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms