RNA–Protein interactions for RNA: ENST00000511985.1

PDGFC-207, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 725 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-207ENST00000511985 AEBP2Q6ZN18 517 aaPredicted RBP34.99■■■■□ 3.19
PDGFC-207ENST00000511985 CHIC1Q5VXU3 224 aa33.62■■■□□ 2.97
PDGFC-207ENST00000511985 SENP3Q9H4L4 574 aaPredicted RBP29.68■■■□□ 2.34
PDGFC-207ENST00000511985 PHF23Q9BUL5 403 aaPredicted RBP29.58■■■□□ 2.33
PDGFC-207ENST00000511985 FOXD1Q16676 465 aa27.67■■■□□ 2.02
PDGFC-207ENST00000511985 PLPPR3Q6T4P5 718 aa27.06■■□□□ 1.92
PDGFC-207ENST00000511985 PPP6R1Q9UPN7 881 aa26.28■■□□□ 1.8
PDGFC-207ENST00000511985 ADRA2BP18089 450 aa26.22■■□□□ 1.79
PDGFC-207ENST00000511985 PIAS4Q8N2W9 510 aaPredicted RBP25.97■■□□□ 1.75
PDGFC-207ENST00000511985 MSH5O43196 834 aa25.64■■□□□ 1.7
PDGFC-207ENST00000511985 POTEDQ86YR6 584 aa24.29■■□□□ 1.48
PDGFC-207ENST00000511985 MAPK8IP2Q13387 824 aaPredicted RBP23.96■■□□□ 1.43
PDGFC-207ENST00000511985 SCAF1Q9H7N4 1312 aaKnown RBP23.87■■□□□ 1.41
PDGFC-207ENST00000511985 PPP4R3CPQ6ZMV5 832 aa23.82■■□□□ 1.4
PDGFC-207ENST00000511985 DMRT2Q9Y5R5 561 aa23.62■■□□□ 1.37
PDGFC-207ENST00000511985 CNKSR2Q8WXI2 1034 aa23.22■■□□□ 1.31
PDGFC-207ENST00000511985 NCBP3Q53F19 620 aaKnown RBP22.99■■□□□ 1.27
PDGFC-207ENST00000511985 HOXD11P31277 338 aaPredicted RBP22.93■■□□□ 1.26
PDGFC-207ENST00000511985 RNF216Q9NWF9 866 aaPredicted RBP22.89■■□□□ 1.25
PDGFC-207ENST00000511985 KCNA4P22459 653 aa22.74■■□□□ 1.23
PDGFC-207ENST00000511985 NPM3O75607 178 aaKnown RBP22.73■■□□□ 1.23
PDGFC-207ENST00000511985 DCAF8L1A6NGE4 600 aa22.69■■□□□ 1.22
PDGFC-207ENST00000511985 DNAJC5BQ9UF47 199 aa22.02■■□□□ 1.12
PDGFC-207ENST00000511985 RNF39Q9H2S5 420 aa21.96■■□□□ 1.11
PDGFC-207ENST00000511985 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.88■■□□□ 1.09
PDGFC-207ENST00000511985 CACNB1Q02641 598 aaPredicted RBP21.77■■□□□ 1.08
PDGFC-207ENST00000511985 C1QBPQ07021 282 aaKnown RBP21.63■■□□□ 1.05
PDGFC-207ENST00000511985 SLC4A2P04920 1241 aa21.59■■□□□ 1.05
PDGFC-207ENST00000511985 SLC4A1APQ9BWU0 796 aaKnown RBP21.52■■□□□ 1.04
PDGFC-207ENST00000511985 U3KPZ7 1027 aaPredicted RBP21.49■■□□□ 1.03
PDGFC-207ENST00000511985 SPINK5Q9NQ38 1064 aaPredicted RBP21.07■□□□□ 0.96
PDGFC-207ENST00000511985 FOXD4L1Q9NU39 408 aa21.01■□□□□ 0.95
PDGFC-207ENST00000511985 CAPN15O75808 1086 aa20.98■□□□□ 0.95
PDGFC-207ENST00000511985 MYCNP04198 464 aaPredicted RBP20.96■□□□□ 0.95
PDGFC-207ENST00000511985 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.95■□□□□ 0.94
PDGFC-207ENST00000511985 HNRNPUL2Q1KMD3 747 aaKnown RBP20.95■□□□□ 0.94
PDGFC-207ENST00000511985 ZBTB22O15209 634 aa20.94■□□□□ 0.94
PDGFC-207ENST00000511985 SAMD1Q6SPF0 538 aaPredicted RBP20.88■□□□□ 0.93
PDGFC-207ENST00000511985 APLP2Q06481 763 aa20.83■□□□□ 0.93
PDGFC-207ENST00000511985 TRHP20396 242 aaPredicted RBP20.78■□□□□ 0.92
PDGFC-207ENST00000511985 DSG3P32926 999 aa20.74■□□□□ 0.91
PDGFC-207ENST00000511985 ZNF219Q9P2Y4 722 aaPredicted RBP20.68■□□□□ 0.9
PDGFC-207ENST00000511985 ABCB7O75027 752 aa20.58■□□□□ 0.89
PDGFC-207ENST00000511985 ATF5Q9Y2D1 282 aaPredicted RBP20.54■□□□□ 0.88
PDGFC-207ENST00000511985 EHMT2Q96KQ7 1210 aa20.41■□□□□ 0.86
PDGFC-207ENST00000511985 CSRNP3Q8WYN3 585 aa20.37■□□□□ 0.85
PDGFC-207ENST00000511985 POLA2Q14181 598 aa20.31■□□□□ 0.84
PDGFC-207ENST00000511985 ATXN8OSP0DMR3 200 aa20.27■□□□□ 0.84
PDGFC-207ENST00000511985 ZBTB12Q9Y330 459 aaPredicted RBP19.84■□□□□ 0.77
PDGFC-207ENST00000511985 RBM42Q9BTD8 480 aaKnown RBP19.7■□□□□ 0.74
PDGFC-207ENST00000511985 OSCARQ8IYS5 282 aa19.66■□□□□ 0.74
PDGFC-207ENST00000511985 FBLN2P98095 1184 aa19.61■□□□□ 0.73
PDGFC-207ENST00000511985 MKRN4PQ13434 485 aaPredicted RBP19.59■□□□□ 0.73
PDGFC-207ENST00000511985 AKT1S1Q96B36 256 aa19.38■□□□□ 0.69
PDGFC-207ENST00000511985 SPDYE2BA6NHP3 402 aa19.31■□□□□ 0.68
PDGFC-207ENST00000511985 SPDYE6P0CI01 402 aa19.31■□□□□ 0.68
PDGFC-207ENST00000511985 SPDYE2Q495Y8 402 aa19.31■□□□□ 0.68
PDGFC-207ENST00000511985 REM2Q8IYK8 340 aaPredicted RBP19.24■□□□□ 0.67
PDGFC-207ENST00000511985 ZNF692Q9BU19 519 aaPredicted RBP19.19■□□□□ 0.66
PDGFC-207ENST00000511985 CHRDL2Q6WN34 429 aa19.14■□□□□ 0.65
PDGFC-207ENST00000511985 POTEHQ6S545 545 aa19.13■□□□□ 0.65
PDGFC-207ENST00000511985 SSUH2Q9Y2M2 353 aa19.12■□□□□ 0.65
PDGFC-207ENST00000511985 PITPNM1O00562 1244 aa19.04■□□□□ 0.64
PDGFC-207ENST00000511985 PABPN1Q86U42 306 aaKnown RBP eCLIP18.94■□□□□ 0.62
PDGFC-207ENST00000511985 SPDYE4A6NLX3 237 aa18.87■□□□□ 0.61
PDGFC-207ENST00000511985 CLEC11AQ9Y240 323 aa18.87■□□□□ 0.61
PDGFC-207ENST00000511985 SPDYE1Q8NFV5 336 aaPredicted RBP18.86■□□□□ 0.61
PDGFC-207ENST00000511985 PIP4P2Q8N4L2 257 aa18.81■□□□□ 0.6
PDGFC-207ENST00000511985 FXR2P51116 673 aaKnown RBP eCLIP18.75■□□□□ 0.59
PDGFC-207ENST00000511985 PRR29P0C7W0 189 aa18.59■□□□□ 0.57
PDGFC-207ENST00000511985 PRKAR2AP13861 404 aaKnown RBP18.55■□□□□ 0.56
PDGFC-207ENST00000511985 CHADLQ6NUI6 762 aa18.49■□□□□ 0.55
PDGFC-207ENST00000511985 PROM2Q8N271 834 aa18.46■□□□□ 0.55
PDGFC-207ENST00000511985 FKBP8Q14318 412 aa18.45■□□□□ 0.54
PDGFC-207ENST00000511985 STAG3Q9UJ98 1225 aa18.45■□□□□ 0.54
PDGFC-207ENST00000511985 HAX1O00165 279 aa18.34■□□□□ 0.53
PDGFC-207ENST00000511985 CREBZFQ9NS37 354 aa18.27■□□□□ 0.52
PDGFC-207ENST00000511985 FARP1Q9Y4F1 1045 aaPredicted RBP18.21■□□□□ 0.51
PDGFC-207ENST00000511985 EVX2Q03828 476 aa18.2■□□□□ 0.5
PDGFC-207ENST00000511985 C19orf67A6NJJ6 358 aa18.13■□□□□ 0.49
PDGFC-207ENST00000511985 SP7Q8TDD2 431 aaPredicted RBP18.13■□□□□ 0.49
PDGFC-207ENST00000511985 MNX1P50219 401 aaPredicted RBP18.01■□□□□ 0.47
PDGFC-207ENST00000511985 CD44P16070 742 aaKnown RBP17.98■□□□□ 0.47
PDGFC-207ENST00000511985 MIER1Q8N108 512 aa17.96■□□□□ 0.47
PDGFC-207ENST00000511985 NPM1P06748 294 aaKnown RBP eCLIP17.89■□□□□ 0.45
PDGFC-207ENST00000511985 PLCD3Q8N3E9 789 aa17.87■□□□□ 0.45
PDGFC-207ENST00000511985 FBXO3Q9UK99 471 aa17.85■□□□□ 0.45
PDGFC-207ENST00000511985 PLEKHG5O94827 1062 aa17.84■□□□□ 0.45
PDGFC-207ENST00000511985 ZRANB1Q9UGI0 708 aa17.81■□□□□ 0.44
PDGFC-207ENST00000511985 GABBR2O75899 941 aa17.77■□□□□ 0.44
PDGFC-207ENST00000511985 PAK3O75914 559 aaPredicted RBP17.71■□□□□ 0.43
PDGFC-207ENST00000511985 ZNF579Q8NAF0 562 aaKnown RBP17.7■□□□□ 0.42
PDGFC-207ENST00000511985 VASPP50552 380 aaPredicted RBP17.67■□□□□ 0.42
PDGFC-207ENST00000511985 TSPYL2Q9H2G4 693 aaPredicted RBP17.66■□□□□ 0.42
PDGFC-207ENST00000511985 ZBTB47Q9UFB7 747 aaPredicted RBP17.64■□□□□ 0.41
PDGFC-207ENST00000511985 PHF12Q96QT6 1004 aa17.63■□□□□ 0.41
PDGFC-207ENST00000511985 RASEFQ8IZ41 740 aa17.62■□□□□ 0.41
PDGFC-207ENST00000511985 NUBP1P53384 320 aa17.56■□□□□ 0.4
PDGFC-207ENST00000511985 CLCN6P51797 869 aa17.53■□□□□ 0.4
PDGFC-207ENST00000511985 CCDC61Q9Y6R9 512 aa17.52■□□□□ 0.4
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