RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 NDUFA4O00483 81 aa0.23□□□□□ -2.37
NF1-213ENST00000489712 NDUFA3O95167 84 aa0.23□□□□□ -2.37
NF1-213ENST00000489712 C3orf79P0CE67 100 aa0.23□□□□□ -2.37
NF1-213ENST00000489712 CFAP43Q8NDM7 1665 aa0.23□□□□□ -2.37
NF1-213ENST00000489712 MAP3K1Q13233 1512 aa0.23□□□□□ -2.37
NF1-213ENST00000489712 PTPN13Q12923 2485 aa0.22□□□□□ -2.37
NF1-213ENST00000489712 H3BVH4 76 aa0.22□□□□□ -2.37
NF1-213ENST00000489712 PRO3102Q9H379 93 aa0.22□□□□□ -2.37
NF1-213ENST00000489712 SMCO4Q9NRQ5 59 aa0.22□□□□□ -2.37
NF1-213ENST00000489712 NESP48681 1621 aa0.22□□□□□ -2.37
NF1-213ENST00000489712 CSMD3Q7Z407 3707 aa0.22□□□□□ -2.37
NF1-213ENST00000489712 GVINP1Q7Z2Y8 2422 aa0.22□□□□□ -2.37
NF1-213ENST00000489712 SCN11AQ9UI33 1791 aa0.22□□□□□ -2.37
NF1-213ENST00000489712 ANKRD50Q9ULJ7 1429 aa0.21□□□□□ -2.38
NF1-213ENST00000489712 IGSF10Q6WRI0 2623 aa0.21□□□□□ -2.38
NF1-213ENST00000489712 ZNF831Q5JPB2 1677 aa0.21□□□□□ -2.38
NF1-213ENST00000489712 ABCA8O94911 1581 aa0.21□□□□□ -2.38
NF1-213ENST00000489712 PDCD5O14737 125 aa0.21□□□□□ -2.38
NF1-213ENST00000489712 MRPL33O75394 65 aaKnown RBP0.21□□□□□ -2.38
NF1-213ENST00000489712 LELP1Q5T871 98 aa0.21□□□□□ -2.38
NF1-213ENST00000489712 HRNRQ86YZ3 2850 aaPredicted RBP0.21□□□□□ -2.38
NF1-213ENST00000489712 NCOR1O75376 2440 aa0.21□□□□□ -2.38
NF1-213ENST00000489712 PKD1L1Q8TDX9 2849 aa0.2□□□□□ -2.38
NF1-213ENST00000489712 CSPG4Q6UVK1 2322 aa0.2□□□□□ -2.38
NF1-213ENST00000489712 LCE6AA0A183 80 aa0.2□□□□□ -2.38
NF1-213ENST00000489712 PRM1P04553 51 aa0.2□□□□□ -2.38
NF1-213ENST00000489712 DEFB135Q30KP9 77 aa0.2□□□□□ -2.38
NF1-213ENST00000489712 DDX60LQ5H9U9 1706 aaKnown RBP0.2□□□□□ -2.38
NF1-213ENST00000489712 SYNE1Q8NF91 8797 aaKnown RBP0.2□□□□□ -2.38
NF1-213ENST00000489712 CHD6Q8TD26 2715 aa0.2□□□□□ -2.38
NF1-213ENST00000489712 HIVEP3Q5T1R4 2406 aa0.19□□□□□ -2.38
NF1-213ENST00000489712 ABCA2Q9BZC7 2435 aa0.19□□□□□ -2.38
NF1-213ENST00000489712 C4AP0C0L4 1744 aa0.19□□□□□ -2.38
NF1-213ENST00000489712 C4BP0C0L5 1744 aa0.19□□□□□ -2.38
NF1-213ENST00000489712 PLCH1Q4KWH8 1693 aa0.19□□□□□ -2.38
NF1-213ENST00000489712 RALGAPBQ86X10 1494 aa0.19□□□□□ -2.38
NF1-213ENST00000489712 H0YGG7 62 aa0.19□□□□□ -2.38
NF1-213ENST00000489712 LINC00158P58513 81 aa0.19□□□□□ -2.38
NF1-213ENST00000489712 DEFA5Q01523 94 aa0.19□□□□□ -2.38
NF1-213ENST00000489712 UBL5Q9BZL1 73 aa0.19□□□□□ -2.38
NF1-213ENST00000489712 FAT4Q6V0I7 4981 aa0.19□□□□□ -2.38
NF1-213ENST00000489712 UBR5O95071 2799 aaPredicted RBP0.19□□□□□ -2.38
NF1-213ENST00000489712 HFM1A2PYH4 1435 aa0.19□□□□□ -2.38
NF1-213ENST00000489712 UGGT2Q9NYU1 1516 aa0.18□□□□□ -2.38
NF1-213ENST00000489712 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.18□□□□□ -2.386e-16■■■■■ 59.4
NF1-213ENST00000489712 LRP1Q07954 4544 aaKnown RBP0.18□□□□□ -2.38
NF1-213ENST00000489712 GNG13Q9P2W3 67 aa0.18□□□□□ -2.38
NF1-213ENST00000489712 RICTORQ6R327 1708 aa0.18□□□□□ -2.38
NF1-213ENST00000489712 MYO5CQ9NQX4 1742 aa0.18□□□□□ -2.38
NF1-213ENST00000489712 LMTK2Q8IWU2 1503 aa0.18□□□□□ -2.38
NF1-213ENST00000489712 DUOX2Q9NRD8 1548 aa0.18□□□□□ -2.38
NF1-213ENST00000489712 SPTA1P02549 2419 aa0.17□□□□□ -2.38
NF1-213ENST00000489712 SPRR2DP22532 72 aa0.17□□□□□ -2.38
NF1-213ENST00000489712 ATRQ13535 2644 aa0.17□□□□□ -2.38
NF1-213ENST00000489712 ATXN8Q156A1 80 aa0.17□□□□□ -2.38
NF1-213ENST00000489712 THOC2Q8NI27 1593 aaKnown RBP0.17□□□□□ -2.38
NF1-213ENST00000489712 LRRIQ1Q96JM4 1722 aa0.17□□□□□ -2.38
NF1-213ENST00000489712 CELSR1Q9NYQ6 3014 aa0.17□□□□□ -2.38
NF1-213ENST00000489712 CNOT1A5YKK6 2376 aaKnown RBP0.16□□□□□ -2.38
NF1-213ENST00000489712 DEFB131BA0A096LNP1 70 aa0.16□□□□□ -2.38
NF1-213ENST00000489712 CICQ96RK0 1608 aaPredicted RBP0.16□□□□□ -2.38
NF1-213ENST00000489712 CD163L1Q9NR16 1453 aa0.16□□□□□ -2.38
NF1-213ENST00000489712 ENHOQ6UWT2 76 aa0.15□□□□□ -2.39
NF1-213ENST00000489712 DEPDC5O75140 1603 aa0.15□□□□□ -2.39
NF1-213ENST00000489712 IQGAP3Q86VI3 1631 aa0.15□□□□□ -2.39
NF1-213ENST00000489712 EIF2AK4Q9P2K8 1649 aaKnown RBP0.15□□□□□ -2.39
NF1-213ENST00000489712 FSIP2Q5CZC0 6907 aa0.14□□□□□ -2.39
NF1-213ENST00000489712 DMBT1Q9UGM3 2413 aaPredicted RBP0.14□□□□□ -2.39
NF1-213ENST00000489712 SYNE2Q8WXH0 6885 aaKnown RBP0.14□□□□□ -2.39
NF1-213ENST00000489712 ITSN1Q15811 1721 aa0.14□□□□□ -2.39
NF1-213ENST00000489712 SPRR2GQ9BYE4 73 aa0.14□□□□□ -2.39
NF1-213ENST00000489712 KCNQ1DNQ9H478 68 aa0.14□□□□□ -2.39
NF1-213ENST00000489712 COL7A1Q02388 2944 aa0.14□□□□□ -2.39
NF1-213ENST00000489712 CACNA1AO00555 2505 aa0.13□□□□□ -2.39
NF1-213ENST00000489712 HILPDAQ9Y5L2 63 aa0.13□□□□□ -2.39
NF1-213ENST00000489712 PLXNC1O60486 1568 aa0.13□□□□□ -2.39
NF1-213ENST00000489712 ADAMTS12P58397 1594 aa0.13□□□□□ -2.39
NF1-213ENST00000489712 WIZO95785 1651 aa0.13□□□□□ -2.39
NF1-213ENST00000489712 CHD8Q9HCK8 2581 aa0.13□□□□□ -2.39
NF1-213ENST00000489712 EP300Q09472 2414 aaPredicted RBP0.13□□□□□ -2.39
NF1-213ENST00000489712 ETDCA0A1B0GVM5 59 aa0.12□□□□□ -2.39
NF1-213ENST00000489712 HUWE1Q7Z6Z7 4374 aaKnown RBP0.12□□□□□ -2.39
NF1-213ENST00000489712 MYCBP2O75592 4640 aa0.12□□□□□ -2.39
NF1-213ENST00000489712 TJP1Q07157 1748 aa0.11□□□□□ -2.39
NF1-213ENST00000489712 PARP4Q9UKK3 1724 aaKnown RBP0.11□□□□□ -2.39
NF1-213ENST00000489712 LYNX1G3V0Z9 82 aa0.11□□□□□ -2.39
NF1-213ENST00000489712 SPRR2BP35325 72 aa0.11□□□□□ -2.39
NF1-213ENST00000489712 FLNCQ14315 2725 aa0.11□□□□□ -2.39
NF1-213ENST00000489712 NHSQ6T4R5 1651 aa0.11□□□□□ -2.39
NF1-213ENST00000489712 CDC42BPGQ6DT37 1551 aa0.11□□□□□ -2.39
NF1-213ENST00000489712 NRAPQ86VF7 1730 aa0.1□□□□□ -2.39
NF1-213ENST00000489712 REV3LO60673 3130 aa0.1□□□□□ -2.39
NF1-213ENST00000489712 WNK1Q9H4A3 2382 aa0.1□□□□□ -2.39
NF1-213ENST00000489712 ASXL1Q8IXJ9 1541 aa0.1□□□□□ -2.39
NF1-213ENST00000489712 SETXQ7Z333 2677 aaKnown RBP0.1□□□□□ -2.39
NF1-213ENST00000489712 H0YAA0 97 aa0.1□□□□□ -2.39
NF1-213ENST00000489712 IAPPP10997 89 aa0.1□□□□□ -2.39
NF1-213ENST00000489712 APC2O95996 2303 aa0.1□□□□□ -2.39
NF1-213ENST00000489712 KNL1Q8NG31 2342 aa0.1□□□□□ -2.39
NF1-213ENST00000489712 DIP2AQ14689 1571 aa0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms