RNA–Protein interactions for RNA: ENST00000465379.1

SP3-205, Transcript of Sp3 transcription factor, humanhuman

TSL 1 (best)

Gene SP3, Length 5,489 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP3-205ENST00000465379 HEATR1Q9H583 2144 aaKnown RBP2.19□□□□□ -2.06
SP3-205ENST00000465379 EP300Q09472 2414 aaPredicted RBP2.19□□□□□ -2.06
SP3-205ENST00000465379 MALRD1Q5VYJ5 2156 aa2.19□□□□□ -2.06
SP3-205ENST00000465379 DOCK7Q96N67 2140 aa2.18□□□□□ -2.06
SP3-205ENST00000465379 KRTAP10-2P60368 255 aa2.18□□□□□ -2.06
SP3-205ENST00000465379 SPTBP11277 2137 aa2.18□□□□□ -2.06
SP3-205ENST00000465379 GTF3C1Q12789 2109 aa2.18□□□□□ -2.06
SP3-205ENST00000465379 KRTAP4-8A0A0G2JLE6 195 aa2.18□□□□□ -2.06
SP3-205ENST00000465379 WFDC2Q14508 124 aa2.18□□□□□ -2.06
SP3-205ENST00000465379 ZGRF1Q86YA3 2104 aa2.17□□□□□ -2.06
SP3-205ENST00000465379 FAM208BQ5VWN6 2430 aa2.17□□□□□ -2.06
SP3-205ENST00000465379 LCE4AQ5TA78 99 aa2.17□□□□□ -2.06
SP3-205ENST00000465379 MED13Q9UHV7 2174 aa2.17□□□□□ -2.06
SP3-205ENST00000465379 PSPHP1O15172 72 aa2.17□□□□□ -2.06
SP3-205ENST00000465379 KLKP1Q107X0 134 aa2.17□□□□□ -2.06
SP3-205ENST00000465379 ANAPC11Q9NYG5 84 aa2.17□□□□□ -2.06
SP3-205ENST00000465379 SPRR1AP35321 89 aa2.16□□□□□ -2.06
SP3-205ENST00000465379 ZDBF2Q9HCK1 2354 aa2.16□□□□□ -2.06
SP3-205ENST00000465379 PTPRBP23467 1997 aa2.16□□□□□ -2.06
SP3-205ENST00000465379 MPDZO75970 2070 aa2.16□□□□□ -2.06
SP3-205ENST00000465379 HEATR5AQ86XA9 2040 aa2.16□□□□□ -2.06
SP3-205ENST00000465379 SDK1Q7Z5N4 2213 aa2.16□□□□□ -2.06
SP3-205ENST00000465379 SPTA1P02549 2419 aa2.15□□□□□ -2.07
SP3-205ENST00000465379 LCE1DQ5T752 114 aa2.15□□□□□ -2.07
SP3-205ENST00000465379 COL6A6A6NMZ7 2263 aa2.15□□□□□ -2.07
SP3-205ENST00000465379 EYSQ5T1H1 3165 aa2.15□□□□□ -2.07
SP3-205ENST00000465379 MED12LQ86YW9 2145 aa2.15□□□□□ -2.07
SP3-205ENST00000465379 ACACAQ13085 2346 aa2.14□□□□□ -2.07
SP3-205ENST00000465379 CACNA1DQ01668 2161 aa2.14□□□□□ -2.07
SP3-205ENST00000465379 ARFGEF3Q5TH69 2177 aa2.14□□□□□ -2.07
SP3-205ENST00000465379 C4orf26Q17RF5 130 aa2.14□□□□□ -2.07
SP3-205ENST00000465379 DOCK10Q96BY6 2186 aa2.14□□□□□ -2.07
SP3-205ENST00000465379 CNTRLQ7Z7A1 2325 aa2.14□□□□□ -2.07
SP3-205ENST00000465379 KRTAP25-1Q3LHN0 102 aa2.14□□□□□ -2.07
SP3-205ENST00000465379 TSPEAR-AS2P59090 65 aa2.13□□□□□ -2.07
SP3-205ENST00000465379 KRTAP10-8P60410 259 aa2.13□□□□□ -2.07
SP3-205ENST00000465379 SHANK1Q9Y566 2161 aa2.12□□□□□ -2.07
SP3-205ENST00000465379 TTTY13Q9BZ97 58 aa2.12□□□□□ -2.07
SP3-205ENST00000465379 FREM1Q5H8C1 2179 aa2.11□□□□□ -2.07
SP3-205ENST00000465379 PLXNB1O43157 2135 aa2.11□□□□□ -2.07
SP3-205ENST00000465379 LAMA5O15230 3695 aa2.1□□□□□ -2.07
SP3-205ENST00000465379 PRRC2AP48634 2157 aaKnown RBP2.1□□□□□ -2.07
SP3-205ENST00000465379 MED12Q93074 2177 aa2.1□□□□□ -2.07
SP3-205ENST00000465379 BPTFQ12830 3046 aa2.1□□□□□ -2.07
SP3-205ENST00000465379 KRTAP4-16G5E9R7 235 aaPredicted RBP2.09□□□□□ -2.07
SP3-205ENST00000465379 KIF26BQ2KJY2 2108 aa2.09□□□□□ -2.07
SP3-205ENST00000465379 RTTNQ86VV8 2226 aa2.09□□□□□ -2.08
SP3-205ENST00000465379 KRTAP9-7A8MTY7 169 aa2.09□□□□□ -2.08
SP3-205ENST00000465379 LINC01558Q9Y6Z2 57 aa2.09□□□□□ -2.08
SP3-205ENST00000465379 TPRP12270 2363 aaKnown RBP2.08□□□□□ -2.08
SP3-205ENST00000465379 USF3Q68DE3 2245 aa2.08□□□□□ -2.08
SP3-205ENST00000465379 CYSTM1Q9H1C7 97 aa2.08□□□□□ -2.08
SP3-205ENST00000465379 NBASA2RRP1 2371 aa2.08□□□□□ -2.08
SP3-205ENST00000465379 PRAC1Q96KF2 57 aa2.08□□□□□ -2.08
SP3-205ENST00000465379 KRTAP4-7Q9BYR0 210 aa2.08□□□□□ -2.08
SP3-205ENST00000465379 NOTCH4Q99466 2003 aa2.08□□□□□ -2.08
SP3-205ENST00000465379 CNOT1A5YKK6 2376 aaKnown RBP2.07□□□□□ -2.08
SP3-205ENST00000465379 PTPN13Q12923 2485 aa2.07□□□□□ -2.08
SP3-205ENST00000465379 BSNQ9UPA5 3926 aa2.07□□□□□ -2.08
SP3-205ENST00000465379 KRTAP16-1A8MUX0 517 aa2.07□□□□□ -2.08
SP3-205ENST00000465379 KMT2BQ9UMN6 2715 aaPredicted RBP2.07□□□□□ -2.08
SP3-205ENST00000465379 A6NN06 94 aa2.07□□□□□ -2.08
SP3-205ENST00000465379 KRTAP11-1Q8IUC1 163 aa2.07□□□□□ -2.08
SP3-205ENST00000465379 AGRNO00468 2067 aa2.07□□□□□ -2.08
SP3-205ENST00000465379 PLCE1Q9P212 2302 aa2.07□□□□□ -2.08
SP3-205ENST00000465379 PTPRQQ9UMZ3 2332 aa2.06□□□□□ -2.08
SP3-205ENST00000465379 LINC00472Q9H8W2 130 aa2.06□□□□□ -2.08
SP3-205ENST00000465379 USP34Q70CQ2 3546 aa2.06□□□□□ -2.08
SP3-205ENST00000465379 NAV3Q8IVL0 2385 aa2.05□□□□□ -2.08
SP3-205ENST00000465379 KIAA1549Q9HCM3 1950 aa2.05□□□□□ -2.08
SP3-205ENST00000465379 OTOGLQ3ZCN5 2332 aa2.04□□□□□ -2.08
SP3-205ENST00000465379 CACNA1CQ13936 2221 aa2.04□□□□□ -2.08
SP3-205ENST00000465379 KRTAP4-9Q9BYQ8 210 aa2.04□□□□□ -2.08
SP3-205ENST00000465379 ARID1AO14497 2285 aa2.04□□□□□ -2.08
SP3-205ENST00000465379 A0A1B0GVY2 172 aa2.04□□□□□ -2.08
SP3-205ENST00000465379 NBPF19A0A087WUL8 3843 aa2.03□□□□□ -2.08
SP3-205ENST00000465379 HCFC1P51610 2035 aa2.03□□□□□ -2.08
SP3-205ENST00000465379 LAMA3Q16787 3333 aa2.03□□□□□ -2.08
SP3-205ENST00000465379 URB1-AS1Q96HZ7 61 aa2.03□□□□□ -2.08
SP3-205ENST00000465379 C10orf95Q9H7T3 257 aa2.03□□□□□ -2.08
SP3-205ENST00000465379 BRWD1Q9NSI6 2320 aa2.03□□□□□ -2.09
SP3-205ENST00000465379 NCOA6Q14686 2063 aaPredicted RBP2.02□□□□□ -2.09
SP3-205ENST00000465379 NCOR1O75376 2440 aa2.02□□□□□ -2.09
SP3-205ENST00000465379 KRTAP26-1Q6PEX3 210 aa2.02□□□□□ -2.09
SP3-205ENST00000465379 CEP290O15078 2479 aa2.02□□□□□ -2.09
SP3-205ENST00000465379 KRTAP4-5Q9BYR2 181 aa2.02□□□□□ -2.09
SP3-205ENST00000465379 DNAJC13O75165 2243 aa2.01□□□□□ -2.09
SP3-205ENST00000465379 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.01□□□□□ -2.09
SP3-205ENST00000465379 SPENQ96T58 3664 aaKnown RBP2.01□□□□□ -2.09
SP3-205ENST00000465379 PCNX1Q96RV3 2341 aa2.01□□□□□ -2.09
SP3-205ENST00000465379 KRTAP13-3Q3SY46 172 aa2.01□□□□□ -2.09
SP3-205ENST00000465379 KRTAP1-5Q9BYS1 174 aa2.01□□□□□ -2.09
SP3-205ENST00000465379 PRR14LQ5THK1 2151 aa2□□□□□ -2.09
SP3-205ENST00000465379 LCE5AQ5TCM9 118 aa2□□□□□ -2.09
SP3-205ENST00000465379 H0YAA0 97 aa2□□□□□ -2.09
SP3-205ENST00000465379 MYCBP2O75592 4640 aa2□□□□□ -2.09
SP3-205ENST00000465379 ZNF407Q9C0G0 2248 aa1.99□□□□□ -2.09
SP3-205ENST00000465379 KRTAP4-11Q9BYQ6 195 aa1.99□□□□□ -2.09
SP3-205ENST00000465379 NAV2Q8IVL1 2488 aa1.99□□□□□ -2.09
SP3-205ENST00000465379 KRTAP4-2Q9BYR5 136 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms