RNA–Protein interactions for RNA: ENST00000465379.1

SP3-205, Transcript of Sp3 transcription factor, humanhuman

TSL 1 (best)

Gene SP3, Length 5,489 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP3-205ENST00000465379 AEBP2Q6ZN18 517 aaPredicted RBP8.19□□□□□ -1.1
SP3-205ENST00000465379 CHIC1Q5VXU3 224 aa7.87□□□□□ -1.15
SP3-205ENST00000465379 SENP3Q9H4L4 574 aaPredicted RBP7□□□□□ -1.29
SP3-205ENST00000465379 PHF23Q9BUL5 403 aaPredicted RBP6.97□□□□□ -1.29
SP3-205ENST00000465379 FAM9AQ8IZU1 332 aaPredicted RBP6.82□□□□□ -1.32
SP3-205ENST00000465379 FOXD1Q16676 465 aa6.52□□□□□ -1.37
SP3-205ENST00000465379 PLPPR3Q6T4P5 718 aa6.4□□□□□ -1.38
SP3-205ENST00000465379 DCAF8L2P0C7V8 631 aa6.25□□□□□ -1.41
SP3-205ENST00000465379 ADRA2BP18089 450 aa6.25□□□□□ -1.41
SP3-205ENST00000465379 NISCHQ9Y2I1 1504 aa6.22□□□□□ -1.41
SP3-205ENST00000465379 PPP6R1Q9UPN7 881 aa6.21□□□□□ -1.42
SP3-205ENST00000465379 PIAS4Q8N2W9 510 aaPredicted RBP6.21□□□□□ -1.42
SP3-205ENST00000465379 MSH5O43196 834 aa6.03□□□□□ -1.44
SP3-205ENST00000465379 APLP2Q06481 763 aa5.92□□□□□ -1.46
SP3-205ENST00000465379 DCAF8L1A6NGE4 600 aa5.84□□□□□ -1.47
SP3-205ENST00000465379 MYT1LQ9UL68 1186 aa5.78□□□□□ -1.48
SP3-205ENST00000465379 NEFMP07197 916 aa5.78□□□□□ -1.48
SP3-205ENST00000465379 PELP1Q8IZL8 1130 aaKnown RBP5.78□□□□□ -1.48
SP3-205ENST00000465379 ESF1Q9H501 851 aaKnown RBP5.75□□□□□ -1.49
SP3-205ENST00000465379 NPM1P06748 294 aaKnown RBP eCLIP5.71□□□□□ -1.49
SP3-205ENST00000465379 POTEDQ86YR6 584 aa5.71□□□□□ -1.49
SP3-205ENST00000465379 MAPK8IP2Q13387 824 aaPredicted RBP5.71□□□□□ -1.5
SP3-205ENST00000465379 SCAF1Q9H7N4 1312 aaKnown RBP5.7□□□□□ -1.5
SP3-205ENST00000465379 CSRNP3Q8WYN3 585 aa5.67□□□□□ -1.5
SP3-205ENST00000465379 PPP4R3CPQ6ZMV5 832 aa5.65□□□□□ -1.51
SP3-205ENST00000465379 ANO8Q9HCE9 1232 aaPredicted RBP5.63□□□□□ -1.51
SP3-205ENST00000465379 HMGB2P26583 209 aaKnown RBP5.59□□□□□ -1.51
SP3-205ENST00000465379 HAP1P54257 671 aaPredicted RBP5.57□□□□□ -1.52
SP3-205ENST00000465379 CCER1Q8TC90 406 aaPredicted RBP5.53□□□□□ -1.52
SP3-205ENST00000465379 DMRT2Q9Y5R5 561 aa5.51□□□□□ -1.53
SP3-205ENST00000465379 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.51□□□□□ -1.53
SP3-205ENST00000465379 HNRNPUL2Q1KMD3 747 aaKnown RBP5.51□□□□□ -1.53
SP3-205ENST00000465379 NCBP3Q53F19 620 aaKnown RBP5.48□□□□□ -1.53
SP3-205ENST00000465379 KRI1Q8N9T8 703 aaKnown RBP5.47□□□□□ -1.53
SP3-205ENST00000465379 CNKSR2Q8WXI2 1034 aa5.47□□□□□ -1.53
SP3-205ENST00000465379 BCANQ96GW7 911 aa5.47□□□□□ -1.53
SP3-205ENST00000465379 ACIN1Q9UKV3 1341 aaKnown RBP5.46□□□□□ -1.54
SP3-205ENST00000465379 NPM2Q86SE8 214 aaKnown RBP5.46□□□□□ -1.54
SP3-205ENST00000465379 CHMP7Q8WUX9 453 aaPredicted RBP5.44□□□□□ -1.54
SP3-205ENST00000465379 EIF4G2P78344 907 aaKnown RBP eCLIP5.43□□□□□ -1.54
SP3-205ENST00000465379 CDK11AQ9UQ88 783 aaPredicted RBP5.43□□□□□ -1.54
SP3-205ENST00000465379 ATP1B4Q9UN42 357 aaPredicted RBP5.43□□□□□ -1.54
SP3-205ENST00000465379 KCNA4P22459 653 aa5.42□□□□□ -1.54
SP3-205ENST00000465379 HDGFP51858 240 aaKnown RBP5.41□□□□□ -1.54
SP3-205ENST00000465379 STAG3Q9UJ98 1225 aa5.41□□□□□ -1.54
SP3-205ENST00000465379 ZBTB47Q9UFB7 747 aaPredicted RBP5.4□□□□□ -1.55
SP3-205ENST00000465379 SLC24A1O60721 1099 aa5.39□□□□□ -1.55
SP3-205ENST00000465379 TMX4Q9H1E5 349 aaPredicted RBP5.39□□□□□ -1.55
SP3-205ENST00000465379 DNAJC5BQ9UF47 199 aa5.39□□□□□ -1.55
SP3-205ENST00000465379 WASHC2AQ641Q2 1341 aa5.39□□□□□ -1.55
SP3-205ENST00000465379 SUPT5HO00267 1087 aaKnown RBP5.37□□□□□ -1.55
SP3-205ENST00000465379 NPM3O75607 178 aaKnown RBP5.36□□□□□ -1.55
SP3-205ENST00000465379 TRHP20396 242 aaPredicted RBP5.35□□□□□ -1.55
SP3-205ENST00000465379 YTHDC1Q96MU7 727 aaKnown RBP5.35□□□□□ -1.55
SP3-205ENST00000465379 RNF216Q9NWF9 866 aaPredicted RBP5.34□□□□□ -1.55
SP3-205ENST00000465379 MAP3K9P80192 1104 aa5.34□□□□□ -1.55
SP3-205ENST00000465379 ERCC6Q03468 1493 aa5.34□□□□□ -1.56
SP3-205ENST00000465379 ZNF710Q8N1W2 664 aa5.34□□□□□ -1.56
SP3-205ENST00000465379 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.32□□□□□ -1.56
SP3-205ENST00000465379 HOXD11P31277 338 aaPredicted RBP5.32□□□□□ -1.56
SP3-205ENST00000465379 CDK11BP21127 795 aaKnown RBP5.31□□□□□ -1.56
SP3-205ENST00000465379 SLC4A1APQ9BWU0 796 aaKnown RBP5.31□□□□□ -1.56
SP3-205ENST00000465379 FBLN2P98095 1184 aa5.3□□□□□ -1.56
SP3-205ENST00000465379 PLEKHD1A6NEE1 506 aa5.29□□□□□ -1.56
SP3-205ENST00000465379 SF3B2Q13435 895 aaKnown RBP5.29□□□□□ -1.56
SP3-205ENST00000465379 C14orf37Q86TY3 774 aa5.28□□□□□ -1.56
SP3-205ENST00000465379 PABPN1Q86U42 306 aaKnown RBP eCLIP5.28□□□□□ -1.56
SP3-205ENST00000465379 SSFA2P28290 1259 aa5.28□□□□□ -1.56
SP3-205ENST00000465379 ARID4BQ4LE39 1312 aaPredicted RBP5.27□□□□□ -1.57
SP3-205ENST00000465379 GOLGA2Q08379 1002 aa5.27□□□□□ -1.57
SP3-205ENST00000465379 WDHD1O75717 1129 aaPredicted RBP5.26□□□□□ -1.57
SP3-205ENST00000465379 EHMT2Q96KQ7 1210 aa5.26□□□□□ -1.57
SP3-205ENST00000465379 CACNB1Q02641 598 aaPredicted RBP5.25□□□□□ -1.57
SP3-205ENST00000465379 RB1CC1Q8TDY2 1594 aa5.25□□□□□ -1.57
SP3-205ENST00000465379 MEX3CQ5U5Q3 659 aaKnown RBP5.24□□□□□ -1.57
SP3-205ENST00000465379 FKBP8Q14318 412 aa5.24□□□□□ -1.57
SP3-205ENST00000465379 EIF5BO60841 1220 aaKnown RBP5.24□□□□□ -1.57
SP3-205ENST00000465379 PPP1R15AO75807 674 aaPredicted RBP5.23□□□□□ -1.57
SP3-205ENST00000465379 ABCC9O60706 1549 aa5.22□□□□□ -1.57
SP3-205ENST00000465379 NPHP1O15259 732 aa5.22□□□□□ -1.57
SP3-205ENST00000465379 DAXXQ9UER7 740 aaPredicted RBP5.22□□□□□ -1.57
SP3-205ENST00000465379 CHMP4AQ9BY43 222 aa5.21□□□□□ -1.58
SP3-205ENST00000465379 A0A0G2JS52 829 aa5.2□□□□□ -1.58
SP3-205ENST00000465379 MYT1Q01538 1121 aa5.2□□□□□ -1.58
SP3-205ENST00000465379 UBTFP17480 764 aaKnown RBP5.2□□□□□ -1.58
SP3-205ENST00000465379 ANP32EQ9BTT0 268 aa5.2□□□□□ -1.58
SP3-205ENST00000465379 PPARGC1BQ86YN6 1023 aaKnown RBP5.19□□□□□ -1.58
SP3-205ENST00000465379 TRIM26Q12899 539 aaPredicted RBP5.19□□□□□ -1.58
SP3-205ENST00000465379 TTBK1Q5TCY1 1321 aaPredicted RBP5.18□□□□□ -1.58
SP3-205ENST00000465379 ERICH6Q7L0X2 663 aa5.17□□□□□ -1.58
SP3-205ENST00000465379 HMGB3O15347 200 aaKnown RBP5.17□□□□□ -1.58
SP3-205ENST00000465379 NEFLP07196 543 aa5.16□□□□□ -1.58
SP3-205ENST00000465379 WWC1Q8IX03 1113 aa5.14□□□□□ -1.59
SP3-205ENST00000465379 TRIM41Q8WV44 630 aa5.14□□□□□ -1.59
SP3-205ENST00000465379 RSF1Q96T23 1441 aaPredicted RBP5.13□□□□□ -1.59
SP3-205ENST00000465379 KANK1Q14678 1352 aa5.13□□□□□ -1.59
SP3-205ENST00000465379 RNF39Q9H2S5 420 aa5.12□□□□□ -1.59
SP3-205ENST00000465379 CLSPNQ9HAW4 1339 aa5.12□□□□□ -1.59
SP3-205ENST00000465379 CAPN15O75808 1086 aa5.1□□□□□ -1.59
SP3-205ENST00000465379 CWC22Q9HCG8 908 aaKnown RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms