RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 IGLV5-48A0A075B6I7 105 aa1.88□□□□□ -2.11
SF3B1-203ENST00000414174 K7EQZ3 153 aa1.88□□□□□ -2.11
SF3B1-203ENST00000414174 F5P12259 2224 aa1.88□□□□□ -2.11
SF3B1-203ENST00000414174 MED13LQ71F56 2210 aa1.87□□□□□ -2.11
SF3B1-203ENST00000414174 KRTAP12-2P59991 146 aa1.87□□□□□ -2.11
SF3B1-203ENST00000414174 COX6B2Q6YFQ2 88 aa1.87□□□□□ -2.11
SF3B1-203ENST00000414174 BRWD1Q9NSI6 2320 aa1.86□□□□□ -2.11
SF3B1-203ENST00000414174 CACNA1CQ13936 2221 aa1.86□□□□□ -2.11
SF3B1-203ENST00000414174 IGKV2-24A0A0C4DH68 120 aa1.86□□□□□ -2.11
SF3B1-203ENST00000414174 ANKRD17O75179 2603 aaKnown RBP1.86□□□□□ -2.11
SF3B1-203ENST00000414174 MINOS1Q5TGZ0 78 aa1.85□□□□□ -2.11
SF3B1-203ENST00000414174 CRIPTQ9P021 101 aa1.85□□□□□ -2.11
SF3B1-203ENST00000414174 C6orf48Q9UBA6 75 aa1.85□□□□□ -2.11
SF3B1-203ENST00000414174 GOLGB1Q14789 3259 aaKnown RBP1.84□□□□□ -2.11
SF3B1-203ENST00000414174 TECTAO75443 2155 aa1.84□□□□□ -2.11
SF3B1-203ENST00000414174 M0QY20 66 aa1.84□□□□□ -2.11
SF3B1-203ENST00000414174 IGFL1Q6UW32 110 aa1.84□□□□□ -2.11
SF3B1-203ENST00000414174 LEAP2Q969E1 77 aa1.84□□□□□ -2.11
SF3B1-203ENST00000414174 H0YAA0 97 aa1.83□□□□□ -2.12
SF3B1-203ENST00000414174 KRTAP10-1P60331 282 aa1.83□□□□□ -2.12
SF3B1-203ENST00000414174 PCOTHQ58A44 107 aa1.83□□□□□ -2.12
SF3B1-203ENST00000414174 PP632Q6XCG6 107 aa1.83□□□□□ -2.12
SF3B1-203ENST00000414174 PCNTO95613 3336 aa1.83□□□□□ -2.12
SF3B1-203ENST00000414174 CADP27708 2225 aa1.82□□□□□ -2.12
SF3B1-203ENST00000414174 WFDC13Q8IUB5 93 aa1.82□□□□□ -2.12
SF3B1-203ENST00000414174 MRPL34Q9BQ48 92 aaKnown RBP1.82□□□□□ -2.12
SF3B1-203ENST00000414174 COX6A2Q02221 97 aa1.81□□□□□ -2.12
SF3B1-203ENST00000414174 SPINK13Q1W4C9 94 aa1.81□□□□□ -2.12
SF3B1-203ENST00000414174 KRTAP13-2Q52LG2 175 aa1.81□□□□□ -2.12
SF3B1-203ENST00000414174 TMEM167AQ8TBQ9 72 aa1.81□□□□□ -2.12
SF3B1-203ENST00000414174 TNRC18O15417 2968 aaPredicted RBP1.8□□□□□ -2.12
SF3B1-203ENST00000414174 RPL37P61927 97 aaKnown RBP1.8□□□□□ -2.12
SF3B1-203ENST00000414174 Q6ZSA8 131 aa1.8□□□□□ -2.12
SF3B1-203ENST00000414174 WFDC10BQ8IUB3 73 aa1.8□□□□□ -2.12
SF3B1-203ENST00000414174 KNTC1P50748 2209 aa1.8□□□□□ -2.12
SF3B1-203ENST00000414174 SORL1Q92673 2214 aa1.79□□□□□ -2.12
SF3B1-203ENST00000414174 WT1-ASQ06250 92 aa1.79□□□□□ -2.12
SF3B1-203ENST00000414174 UBE2DNLQ8IWF7 75 aa1.79□□□□□ -2.12
SF3B1-203ENST00000414174 DEFB123Q8N688 67 aa1.79□□□□□ -2.12
SF3B1-203ENST00000414174 USMG5Q96IX5 58 aa1.79□□□□□ -2.12
SF3B1-203ENST00000414174 RTTNQ86VV8 2226 aa1.78□□□□□ -2.12
SF3B1-203ENST00000414174 LYNX1P0DP58 116 aa1.78□□□□□ -2.12
SF3B1-203ENST00000414174 PRR9Q5T870 116 aa1.78□□□□□ -2.12
SF3B1-203ENST00000414174 K7EIM0 57 aa1.77□□□□□ -2.13
SF3B1-203ENST00000414174 DEFB131AP59861 70 aa1.77□□□□□ -2.13
SF3B1-203ENST00000414174 BPTFQ12830 3046 aa1.77□□□□□ -2.13
SF3B1-203ENST00000414174 TRIOBPQ9H2D6 2365 aa1.76□□□□□ -2.13
SF3B1-203ENST00000414174 MMP24-AS1A0A0U1RRL7 71 aa1.76□□□□□ -2.13
SF3B1-203ENST00000414174 URB1O60287 2271 aaKnown RBP1.76□□□□□ -2.13
SF3B1-203ENST00000414174 ABCA1O95477 2261 aa1.75□□□□□ -2.13
SF3B1-203ENST00000414174 H1FX-AS1Q4G0G2 97 aa1.75□□□□□ -2.13
SF3B1-203ENST00000414174 RPL39P5Q59GN2 51 aa1.75□□□□□ -2.13
SF3B1-203ENST00000414174 PTPRQQ9UMZ3 2332 aa1.74□□□□□ -2.13
SF3B1-203ENST00000414174 UNQ6190/PRO20217Q6UXQ8 127 aa1.74□□□□□ -2.13
SF3B1-203ENST00000414174 KAAG1Q9UBP8 84 aa1.74□□□□□ -2.13
SF3B1-203ENST00000414174 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.74□□□□□ -2.132e-8■■■■■ 32.6
SF3B1-203ENST00000414174 PIEZO1Q92508 2521 aa1.74□□□□□ -2.13
SF3B1-203ENST00000414174 FN1P02751 2386 aaKnown RBP1.73□□□□□ -2.13
SF3B1-203ENST00000414174 C10orf95Q9H7T3 257 aa1.73□□□□□ -2.13
SF3B1-203ENST00000414174 ATRXP46100 2492 aa1.73□□□□□ -2.13
SF3B1-203ENST00000414174 ASXL3Q9C0F0 2248 aa1.72□□□□□ -2.13
SF3B1-203ENST00000414174 SZT2Q5T011 3432 aa1.72□□□□□ -2.13
SF3B1-203ENST00000414174 AHCTF1Q8WYP5 2266 aa1.72□□□□□ -2.13
SF3B1-203ENST00000414174 KRTAP1-4P0C5Y4 121 aa1.72□□□□□ -2.13
SF3B1-203ENST00000414174 DEFB130BP0DP73 79 aa1.72□□□□□ -2.13
SF3B1-203ENST00000414174 DEFB130AP0DP74 79 aa1.72□□□□□ -2.13
SF3B1-203ENST00000414174 TTC28Q96AY4 2481 aa1.72□□□□□ -2.13
SF3B1-203ENST00000414174 CACNA1EQ15878 2313 aa1.71□□□□□ -2.14
SF3B1-203ENST00000414174 COL6A3P12111 3177 aa1.71□□□□□ -2.14
SF3B1-203ENST00000414174 SPRR5A0A1B0GTR4 108 aa1.71□□□□□ -2.14
SF3B1-203ENST00000414174 DEFB108AA8MXU0 73 aa1.71□□□□□ -2.14
SF3B1-203ENST00000414174 LELP1Q5T871 98 aa1.71□□□□□ -2.14
SF3B1-203ENST00000414174 BRD3OSQ6XYD6 125 aa1.71□□□□□ -2.14
SF3B1-203ENST00000414174 TOMM7Q9P0U1 55 aa1.71□□□□□ -2.14
SF3B1-203ENST00000414174 MKI67P46013 3256 aaKnown RBP1.71□□□□□ -2.14
SF3B1-203ENST00000414174 CNOT1A5YKK6 2376 aaKnown RBP1.71□□□□□ -2.14
SF3B1-203ENST00000414174 A8MTW9 85 aa1.7□□□□□ -2.14
SF3B1-203ENST00000414174 CEP290O15078 2479 aa1.7□□□□□ -2.14
SF3B1-203ENST00000414174 CLPSL2Q6UWE3 100 aa1.7□□□□□ -2.14
SF3B1-203ENST00000414174 DEFB104AQ8WTQ1 72 aa1.7□□□□□ -2.14
SF3B1-203ENST00000414174 USF3Q68DE3 2245 aa1.7□□□□□ -2.14
SF3B1-203ENST00000414174 A0A0C4DFX4 3053 aa1.7□□□□□ -2.14
SF3B1-203ENST00000414174 HTTP42858 3142 aa1.69□□□□□ -2.14
SF3B1-203ENST00000414174 CACNA1AO00555 2505 aa1.69□□□□□ -2.14
SF3B1-203ENST00000414174 K7EIL1 84 aa1.69□□□□□ -2.14
SF3B1-203ENST00000414174 SPTBN5Q9NRC6 3674 aaKnown RBP1.69□□□□□ -2.14
SF3B1-203ENST00000414174 ALMS1Q8TCU4 4167 aa1.69□□□□□ -2.14
SF3B1-203ENST00000414174 RANBP2P49792 3224 aaKnown RBP1.69□□□□□ -2.14
SF3B1-203ENST00000414174 NCOR1O75376 2440 aa1.69□□□□□ -2.14
SF3B1-203ENST00000414174 LAMA3Q16787 3333 aa1.68□□□□□ -2.14
SF3B1-203ENST00000414174 DOPEY2Q9Y3R5 2298 aa1.68□□□□□ -2.14
SF3B1-203ENST00000414174 KLK9Q2XQG4 91 aa1.68□□□□□ -2.14
SF3B1-203ENST00000414174 DEFB109BQ30KR1 87 aa1.68□□□□□ -2.14
SF3B1-203ENST00000414174 MUC6Q6W4X9 2439 aa1.68□□□□□ -2.14
SF3B1-203ENST00000414174 MUC3AQ02505 3323 aa1.68□□□□□ -2.14
SF3B1-203ENST00000414174 PLCE1Q9P212 2302 aa1.67□□□□□ -2.14
SF3B1-203ENST00000414174 BRCA2P51587 3418 aa1.67□□□□□ -2.14
SF3B1-203ENST00000414174 H3BUA1 57 aa1.67□□□□□ -2.14
SF3B1-203ENST00000414174 KRTAP13-4Q3LI77 160 aa1.67□□□□□ -2.14
SF3B1-203ENST00000414174 UNC80Q8N2C7 3258 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms