RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 Gm12253Q5NC48 229 aa7.66□□□□□ -1.18
Ldlr-202ENSMUST00000213114 Olfr553Q7TRS6 326 aa7.66□□□□□ -1.18
Ldlr-202ENSMUST00000213114 Tm4sf20Q9CQY8 226 aa7.66□□□□□ -1.18
Ldlr-202ENSMUST00000213114 ChtopQ9CY57 249 aaKnown RBP7.66□□□□□ -1.18
Ldlr-202ENSMUST00000213114 Ube2cQ9D1C1 179 aa7.66□□□□□ -1.18
Ldlr-202ENSMUST00000213114 Mettl26Q9DCS2 204 aa7.66□□□□□ -1.18
Ldlr-202ENSMUST00000213114 Abca2P41234 2434 aa7.66□□□□□ -1.18
Ldlr-202ENSMUST00000213114 Fer1l4A3KGK3 1992 aa7.66□□□□□ -1.18
Ldlr-202ENSMUST00000213114 Ighv8-2A0A0A6YW58 119 aa7.66□□□□□ -1.18
Ldlr-202ENSMUST00000213114 Ighv1-31A0A0A6YWK5 117 aa7.66□□□□□ -1.18
Ldlr-202ENSMUST00000213114 Ighv1-20A0A0A6YX66 117 aa7.66□□□□□ -1.18
Ldlr-202ENSMUST00000213114 Rnf5O35445 180 aa7.66□□□□□ -1.18
Ldlr-202ENSMUST00000213114 Svs5P30933 122 aa7.66□□□□□ -1.18
Ldlr-202ENSMUST00000213114 Slc35d2Q762D5 326 aa7.66□□□□□ -1.18
Ldlr-202ENSMUST00000213114 Q8C708 225 aa7.66□□□□□ -1.18
Ldlr-202ENSMUST00000213114 Rpp25lQ99JH1 163 aa7.66□□□□□ -1.18
Ldlr-202ENSMUST00000213114 Tmed6Q9CQG0 239 aa7.66□□□□□ -1.18
Ldlr-202ENSMUST00000213114 Ssbp2Q9CYZ8 361 aa7.66□□□□□ -1.18
Ldlr-202ENSMUST00000213114 Tmem190Q9D2E9 166 aa7.66□□□□□ -1.18
Ldlr-202ENSMUST00000213114 VsirQ9D659 308 aa7.66□□□□□ -1.18
Ldlr-202ENSMUST00000213114 AY761184Q9D848 116 aa7.66□□□□□ -1.18
Ldlr-202ENSMUST00000213114 Pcnx2Q5DU28 2122 aa7.65□□□□□ -1.18
Ldlr-202ENSMUST00000213114 Igkv19-93A0A0G2JFZ3 115 aa7.65□□□□□ -1.18
Ldlr-202ENSMUST00000213114 Olfr177E9Q7W1 309 aa7.65□□□□□ -1.18
Ldlr-202ENSMUST00000213114 Ripply2Q2WG76 128 aa7.65□□□□□ -1.18
Ldlr-202ENSMUST00000213114 Znf329Q6GQR8 522 aa7.65□□□□□ -1.18
Ldlr-202ENSMUST00000213114 Higd1bQ99JY6 98 aa7.65□□□□□ -1.18
Ldlr-202ENSMUST00000213114 Tmem29A2ANF5 204 aa7.65□□□□□ -1.18
Ldlr-202ENSMUST00000213114 Ascl2O35885 263 aa7.65□□□□□ -1.18
Ldlr-202ENSMUST00000213114 D630044L22RikQ8C701 164 aa7.65□□□□□ -1.18
Ldlr-202ENSMUST00000213114 P01649 108 aa7.65□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Isg15Q64339 161 aaKnown RBP7.65□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Snx22Q8C084 192 aa7.65□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Gm10118Q8C8J5 116 aa7.65□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Immp1lQ9CQU8 166 aa7.65□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Gm27027S4R1M6 97 aa7.65□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Gng4P50153 75 aa7.64□□□□□ -1.19
Ldlr-202ENSMUST00000213114 D130052B06RikQ3UW13 202 aa7.64□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Stpg1Q9D2F5 341 aa7.64□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Tet1Q3URK3 2007 aaKnown RBP7.64□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Ttc28Q80XJ3 2450 aa7.64□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Trav4-4-dv10A0A075B651 110 aa7.64□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Samd10Q7TST3 202 aa7.64□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Klk10Q99M20 278 aa7.64□□□□□ -1.19
Ldlr-202ENSMUST00000213114 LbhQ9CX60 105 aa7.64□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Rnf125Q9D9R0 233 aa7.64□□□□□ -1.19
Ldlr-202ENSMUST00000213114 GlmpQ9JHJ3 404 aa7.64□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Trbv13-3A0A0B4J1H2 113 aa7.64□□□□□ -1.19
Ldlr-202ENSMUST00000213114 AmelxP63277 210 aa7.64□□□□□ -1.19
Ldlr-202ENSMUST00000213114 NrepQ07475 68 aa7.64□□□□□ -1.19
Ldlr-202ENSMUST00000213114 AamdcQ8R0P4 122 aa7.64□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Map1lc3aQ91VR7 121 aa7.64□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Ssbp1Q9CYR0 152 aaKnown RBP7.64□□□□□ -1.19
Ldlr-202ENSMUST00000213114 CstadQ9D245 104 aa7.64□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Hdgfl3Q9JMG7 202 aa7.64□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Wdr90Q6ZPG2 1874 aa7.64□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Trav7n-4A0A075B620 113 aa7.64□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Gm17660B9UIU9 90 aa7.64□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Gm10638F6QEG2 257 aa7.64□□□□□ -1.19
Ldlr-202ENSMUST00000213114 RhogP84096 191 aa7.64□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Q9D8L0 127 aa7.64□□□□□ -1.19
Ldlr-202ENSMUST00000213114 AgrnA2ASQ1 1950 aa7.63□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Gm37388A0A0A6YY46 143 aa7.63□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Rps20P60867 119 aaKnown RBP7.63□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Cdx4Q07424 282 aa7.63□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Tnfrsf13bQ9ET35 249 aa7.63□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Trav16nA0A075B634 117 aa7.63□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Trav21-dv12A0A075B6C4 109 aa7.63□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Ear14F6YUX7 155 aa7.63□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Ly6lH3BJG9 140 aa7.63□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Pfn1P62962 140 aa7.63□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Tmem170bP86050 132 aa7.63□□□□□ -1.19
Ldlr-202ENSMUST00000213114 PigyP0C1P0 71 aa7.63□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Myod1P10085 318 aa7.63□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Tmem40Q4FJU9 225 aa7.63□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Gm4763Q8CFJ5 196 aa7.63□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Sorl1O88307 2215 aaKnown RBP7.62□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Trav9d-1A0A075B699 112 aa7.62□□□□□ -1.19
Ldlr-202ENSMUST00000213114 1500009C09RikD3YYW9 81 aa7.62□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Olfr748E9Q9Z0 307 aa7.62□□□□□ -1.19
Ldlr-202ENSMUST00000213114 AdipoqQ60994 247 aa7.62□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Cd33Q63994 403 aa7.62□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Jpt2Q6PGH2 190 aaKnown RBP7.62□□□□□ -1.19
Ldlr-202ENSMUST00000213114 COA4Q8BT51 87 aa7.62□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Slc25a39Q9D8K8 359 aa7.62□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Vmn1r1E9PVR6 306 aa7.62□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Gm10020E9QAZ2 204 aa7.62□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Rpl15Q9CZM2 204 aaKnown RBP7.62□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Esp24A8R0V6 68 aa7.62□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Olfr1331K7N684 317 aa7.62□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Sox21Q811W0 276 aa7.62□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Cphx2Q8BX39 182 aa7.62□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Spata45Q9CVW4 97 aa7.62□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Gm12888Q3UW77 119 aa7.61□□□□□ -1.19
Ldlr-202ENSMUST00000213114 P03980 138 aa7.61□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Slamf6Q9ET39 351 aa7.61□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Olfr1199Q8VF94 310 aa7.61□□□□□ -1.19
Ldlr-202ENSMUST00000213114 ArtnQ9Z0L2 224 aa7.61□□□□□ -1.19
Ldlr-202ENSMUST00000213114 P01792 123 aa7.61□□□□□ -1.19
Ldlr-202ENSMUST00000213114 Sec11aQ9R0P6 179 aa7.61□□□□□ -1.19
Retrieved 100 of 22,080 RNA–protein pairs in 32.7 ms