RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 Cox8cA6H666 72 aa10□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Gm20708H3BKF4 155 aa10□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Olfr1381Q7TQT4 311 aa10□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Olfr1373Q7TQT6 311 aa10□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Lrrc25Q8K1T1 297 aa10□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Gm5157A0A087WRH8 301 aa10□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Esp4A8R0T8 117 aa10□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 YrdcQ3U5F4 280 aa10□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Tcf15Q60756 195 aa10□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Tmem178aQ9CZ16 297 aa10□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Ca2P00920 260 aaKnown RBP10□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Tpsab1Q02844 273 aa10□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Ppp1r14aQ91VC7 147 aa10□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Tmem210Q9D2F0 147 aa10□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Rs1Q9Z1L4 224 aa10□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Wdr90Q6ZPG2 1874 aa9.99□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Lyrm7Q9DA03 104 aa9.99□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Mlst8Q9DCJ1 326 aa9.99□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Cml3Q9JIY8 226 aa9.99□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Gm17359A0A0G2JEB7 487 aa9.99□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Asphd1Q2TA57 360 aa9.99□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Gm10604Q3V0X7 143 aa9.99□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Insig2Q91WG1 225 aa9.99□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Crybb3Q9JJU9 211 aa9.99□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 HilpdaQ9JLS0 64 aa9.99□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Igkv14-100A0A0G2JG36 117 aa9.99□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Ripply2Q2WG76 128 aa9.99□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Eda2rQ8BX35 297 aa9.99□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Ndfip1Q8R0W6 221 aa9.99□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Dscaml1Q4VA61 2053 aa9.99□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Cpsf4lE9Q2N0 280 aa9.98□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 P01791 123 aa9.98□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Mpv17P19258 176 aa9.98□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Hist1h1tQ07133 208 aa9.98□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 NrepQ07475 68 aa9.98□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Scgb2b24Q7M747 112 aa9.98□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 8030423J24RikQ9CX45 142 aa9.98□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Cks1brtQ3UNC9 96 aa9.98□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Crip3Q6Q6R3 243 aa9.98□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Tmem52Q9D702 196 aa9.98□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 CklfQ9DAS1 152 aa9.98□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Myo18bE9PV66 2605 aa9.98□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Ighv1-22A0A075B5U7 117 aa9.98□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Iglc1A0A0G2JE99 106 aa9.98□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Olfr1192-ps1A0A1L1SRD7 309 aa9.98□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Bricd5Q8BV89 174 aa9.98□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Znrf1Q91V17 227 aa9.98□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Rabac1Q9Z0S9 185 aa9.98□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Igkv13-85A0A075B666 115 aa9.97□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Ighv1-19A0A0A6YWX0 117 aa9.97□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Ighv8-8A0A0A6YXQ0 119 aa9.97□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Znrd1Q791N7 123 aa9.97□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 ManfQ9CXI5 179 aaKnown RBP9.97□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Zfp53Q9Z117 652 aa9.97□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Hivep3A2A884 2348 aa9.97□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Sox21Q811W0 276 aa9.97□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 MrapQ9D159 127 aa9.97□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Q9DAZ5 108 aa9.97□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Olfr894Q9EQB2 313 aa9.97□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Pf4Q9Z126 105 aa9.97□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 P01741 114 aa9.97□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Lyz1P17897 148 aa9.97□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Trav7-2Q5R1I3 112 aa9.97□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Olfr1199Q8VF94 310 aa9.97□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Olfr1454Q8VFW2 307 aa9.97□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Tmem8bB1AWJ5 472 aa9.96□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Prdx2Q61171 198 aaKnown RBP9.96□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Hs3st3b1Q9QZS6 390 aa9.96□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Ighv5-9A0A075B5Q2 117 aa9.96□□□□□ -0.82
Pcdh1-202ENSMUST00000159405 LtaP09225 202 aa9.96□□□□□ -0.82
Pcdh1-202ENSMUST00000159405 Tmem136Q3TYE7 245 aa9.96□□□□□ -0.82
Pcdh1-202ENSMUST00000159405 Spsb3Q571F5 354 aa9.96□□□□□ -0.82
Pcdh1-202ENSMUST00000159405 GaptQ8CB93 157 aa9.96□□□□□ -0.82
Pcdh1-202ENSMUST00000159405 Tomm6Q9CQN3 74 aa9.96□□□□□ -0.82
Pcdh1-202ENSMUST00000159405 Rnase4Q9JJH1 148 aa9.96□□□□□ -0.82
Pcdh1-202ENSMUST00000159405 GrhprQ91Z53 328 aa9.96□□□□□ -0.82
Pcdh1-202ENSMUST00000159405 Ndufc2Q9CQ54 120 aa9.96□□□□□ -0.82
Pcdh1-202ENSMUST00000159405 Rnf114Q9ET26 229 aa9.96□□□□□ -0.82
Pcdh1-202ENSMUST00000159405 Celsr3Q91ZI0 3301 aa9.95□□□□□ -0.82
Pcdh1-202ENSMUST00000159405 Samt3A2ARK7 233 aa9.95□□□□□ -0.82
Pcdh1-202ENSMUST00000159405 Olfr177E9Q7W1 309 aa9.95□□□□□ -0.82
Pcdh1-202ENSMUST00000159405 KncnQ307W7 124 aa9.95□□□□□ -0.82
Pcdh1-202ENSMUST00000159405 Sh2d6Q9D413 297 aa9.95□□□□□ -0.82
Pcdh1-202ENSMUST00000159405 Gm28778A0A087WSK7 233 aa9.95□□□□□ -0.82
Pcdh1-202ENSMUST00000159405 Vmn1r60G3UY47 300 aa9.95□□□□□ -0.82
Pcdh1-202ENSMUST00000159405 Neurog3P70661 214 aa9.95□□□□□ -0.82
Pcdh1-202ENSMUST00000159405 Tctn2Q2MV57 700 aa9.95□□□□□ -0.82
Pcdh1-202ENSMUST00000159405 Chd7A2AJK6 2986 aaKnown RBP9.95□□□□□ -0.82
Pcdh1-202ENSMUST00000159405 3110082J24RikF6Z6Z2 108 aa9.95□□□□□ -0.82
Pcdh1-202ENSMUST00000159405 Olfr1380Q7TQT5 311 aa9.95□□□□□ -0.82
Pcdh1-202ENSMUST00000159405 Spink2Q8BMY7 86 aa9.95□□□□□ -0.82
Pcdh1-202ENSMUST00000159405 TrrapQ80YV3 2565 aaKnown RBP9.94□□□□□ -0.82
Pcdh1-202ENSMUST00000159405 Ighv9-4A0A0A6YWH6 117 aa9.94□□□□□ -0.82
Pcdh1-202ENSMUST00000159405 Esp24A8R0V6 68 aa9.94□□□□□ -0.82
Pcdh1-202ENSMUST00000159405 Zcchc24B2RVL6 241 aaKnown RBP9.94□□□□□ -0.82
Pcdh1-202ENSMUST00000159405 Zfp983E9PUT0 460 aa9.94□□□□□ -0.82
Pcdh1-202ENSMUST00000159405 Vamp8O70404 101 aa9.94□□□□□ -0.82
Pcdh1-202ENSMUST00000159405 Xlr5cQ9JJR2 179 aa9.94□□□□□ -0.82
Pcdh1-202ENSMUST00000159405 Igkv6-14A0A140T8P1 115 aa9.94□□□□□ -0.82
Pcdh1-202ENSMUST00000159405 PolP10400 120 aa9.94□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 33.5 ms