RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Trbv12-2A0A0B4J1H1 124 aa8.59□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Gm867A0A1W2P7T4 151 aa8.59□□□□□ -1.03
Scn8a-201ENSMUST00000082209 P04946 108 aa8.59□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Spata45Q9CVW4 97 aa8.59□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Pygo1Q9D0P5 417 aa8.59□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Ms4a12A0A087WSB9 263 aa8.59□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Myod1P10085 318 aa8.59□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Tdgf1P51865 171 aa8.59□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Cks1bP61025 79 aa8.59□□□□□ -1.04
Scn8a-201ENSMUST00000082209 AtraidQ6PGD0 223 aa8.59□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Cep295Q8BQ48 2412 aa8.58□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Rnf166Q3U9F6 237 aa8.58□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Foxg1Q60987 481 aa8.58□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Znf22Q9ERU3 237 aa8.58□□□□□ -1.04
Scn8a-201ENSMUST00000082209 TroQ6DIC6 2087 aa8.58□□□□□ -1.04
Scn8a-201ENSMUST00000082209 A0A1Y7VMQ4 148 aa8.58□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Efna4O08542 206 aa8.58□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Tex26Q0VB26 296 aa8.58□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Znf474Q6V5K9 347 aa8.58□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Trav21-dv12A0A075B6C4 109 aa8.58□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Tpsab1Q02844 273 aa8.58□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Lmo1Q924W9 156 aa8.58□□□□□ -1.04
Scn8a-201ENSMUST00000082209 1700067P10RikG3X8U2 183 aa8.58□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Gm16686Q3UMN9 131 aa8.58□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Gtf3aQ8VHT7 364 aa8.58□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Hbb-b2P02089 147 aa8.58□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Crim1Q9JLL0 1037 aa8.58□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Zfp36l2P23949 484 aaKnown RBP8.58□□□□□ -1.04
Scn8a-201ENSMUST00000082209 4930544G11RikQ9CR99 193 aa8.58□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Igkv14-130A0A0G2JF45 117 aa8.58□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Cox6b1P56391 86 aaKnown RBP8.58□□□□□ -1.04
Scn8a-201ENSMUST00000082209 ElaneQ3UP87 265 aa8.58□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Ube2d2bQ6ZWY6 147 aa8.58□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Trav14n-3A0A075B645 120 aa8.57□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Pear1Q8VIK5 1034 aa8.57□□□□□ -1.04
Scn8a-201ENSMUST00000082209 P0C1Z5 52 aa8.57□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Dmrtc2Q8CGW9 370 aa8.57□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Gm10881P01642 115 aa8.57□□□□□ -1.04
Scn8a-201ENSMUST00000082209 OtosQ8R448 89 aa8.57□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Znf319Q9ERR8 581 aa8.57□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Notch4P31695 1964 aa8.57□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Slc25a47Q6IS41 310 aa8.57□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Taf15Q8BQ46 557 aaKnown RBP8.57□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Ighv7-2A0A0A6YX91 119 aa8.57□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Gng5Q80SZ7 68 aa8.57□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Rhno1Q8K3A4 235 aa8.57□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Znhit3Q9CQK1 151 aa8.57□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Lyzl4Q9D925 145 aa8.57□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Hs3st6Q5GFD5 342 aa8.57□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Fxyd1Q9Z239 92 aa8.57□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Gm7849D3YX03 116 aa8.56□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Trav2Q5R1I9 109 aa8.56□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Reg4Q9D8G5 157 aa8.56□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Crybb3Q9JJU9 211 aa8.56□□□□□ -1.04
Scn8a-201ENSMUST00000082209 AdmP97297 184 aa8.56□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Nr2c2apQ3TV70 140 aa8.56□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Klk14Q8CGR5 250 aa8.56□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Q8VC23 124 aa8.56□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Cpsf4lE9Q2N0 280 aa8.56□□□□□ -1.04
Scn8a-201ENSMUST00000082209 SeboxP70368 190 aa8.56□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Rpl36aP83882 106 aaKnown RBP8.56□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Pex7P97865 318 aa8.56□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Tomm40Q9QYA2 361 aa8.56□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Olfr976Q8VF15 326 aa8.56□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Thy1P01831 162 aa8.56□□□□□ -1.04
Scn8a-201ENSMUST00000082209 MdfiP70331 251 aa8.56□□□□□ -1.04
Scn8a-201ENSMUST00000082209 TcraP01849 138 aa8.56□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Gpr82Q8BZR0 328 aa8.56□□□□□ -1.04
Scn8a-201ENSMUST00000082209 VsirQ9D659 308 aa8.56□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Timm23Q9WTQ8 209 aa8.56□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Thap8E9Q695 213 aa8.55□□□□□ -1.04
Scn8a-201ENSMUST00000082209 YrdcQ3U5F4 280 aa8.55□□□□□ -1.04
Scn8a-201ENSMUST00000082209 P01649 108 aa8.55□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Pet100P0DJE0 76 aa8.55□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Ttc9cQ810A3 171 aa8.55□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Mrps11Q9DCA2 191 aaKnown RBP8.55□□□□□ -1.04
Scn8a-201ENSMUST00000082209 PmvkQ9D1G2 192 aa8.55□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Gm20379A0A087WR34 119 aa8.55□□□□□ -1.04
Scn8a-201ENSMUST00000082209 6430628N08RikA0A0U1RQ45 177 aa8.55□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Plac1Q9JI83 173 aa8.55□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Gm10439A2AJU2 433 aaKnown RBP8.55□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Gm15114B1B0X6 433 aa8.55□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Smim26Q3V460 107 aa8.55□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Tmem141A2AJB2 108 aa8.55□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Tex54G3UW99 86 aa8.55□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Hist2h2beQ64524 126 aa8.55□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Znhit1Q8R331 154 aa8.55□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Cbln3Q9JHG0 197 aa8.55□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Ndufa11Q9D8B4 141 aa8.55□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Ighv1-23A0A0A6YVW3 117 aa8.55□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Ighv1-36A0A0A6YXT2 117 aa8.55□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Mllt11P97783 90 aa8.55□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Ly6g6eQ8K1T6 166 aa8.55□□□□□ -1.04
Scn8a-201ENSMUST00000082209 AY761184Q9D848 116 aa8.55□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Klf2Q60843 354 aaKnown RBP8.54□□□□□ -1.04
Scn8a-201ENSMUST00000082209 TdhQ8K3F7 373 aa8.54□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Trav6d-7A0A075B6B0 112 aa8.54□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Gm33815A0A087WNV3 176 aa8.54□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Gm16381A0A1Y7VKT9 73 aa8.54□□□□□ -1.04
Scn8a-201ENSMUST00000082209 Gata2O09100 480 aa8.54□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 55.9 ms