RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Fhl3Q9R059 289 aa8.32□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Phlda3Q9WV95 125 aa8.32□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Tmem141A2AJB2 108 aa8.32□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Gm2174F6ZVF2 133 aa8.32□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Sec11aQ9R0P6 179 aa8.32□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 AcacaQ5SWU9 2345 aa8.32□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Gm45717A0A1B0GT68 152 aa8.32□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 P01788 123 aa8.32□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Ccl12Q62401 104 aa8.32□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Fhl4Q8CDC8 279 aa8.32□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Olfr211Q8VGH2 309 aa8.32□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 P01790 122 aa8.31□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Saa3P04918 122 aa8.31□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Olfr976Q8VF15 326 aa8.31□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Olfr33Q8VGX7 318 aa8.31□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Mapk1ip1Q9D7G9 263 aa8.31□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Shank1D3YZU1 2167 aa8.31□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Parp4E9PYK3 1969 aa8.31□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Gm10020E9QAZ2 204 aa8.31□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 SlpiP97430 131 aa8.31□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Q4KKZ1 196 aa8.31□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Pom121l2Q5SW25 972 aa8.31□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Ss18Q62280 418 aa8.31□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Olfr1381Q7TQT4 311 aa8.31□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Vmn1r216Q8R257 298 aa8.31□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Rpl15Q9CZM2 204 aaKnown RBP8.31□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Dazap2Q9DCP9 168 aa8.31□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Gm20379A0A087WR34 119 aa8.31□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Ighv1-69A0A0G2JFS5 117 aa8.31□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Ube2e1P52482 193 aa8.31□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Gm4763Q8CFJ5 196 aa8.31□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 P04219 140 aa8.3□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Gm37388A0A0A6YY46 143 aa8.3□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Trav7-1A0A0G2JEV5 112 aa8.3□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Smad7O35253 426 aa8.3□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Bles03Q8VD62 251 aa8.3□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Mogat1Q91ZV4 335 aa8.3□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Dmrtc1c1Q9D410 238 aa8.3□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Dkk2Q9QYZ8 259 aa8.3□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Ighv14-1A0A075B5R4 117 aa8.3□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Trav6-4A0A075B6B4 115 aa8.3□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Thy1P01831 162 aa8.3□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 P04940 107 aa8.3□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 P04941 107 aa8.3□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 SeleQ00690 612 aa8.3□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 AtrxQ61687 2476 aaKnown RBP8.3□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Cacna1iE9Q7P2 2199 aa8.3□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Psg25Q497W1 475 aa8.3□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Wipf2Q6PEV3 440 aa8.3□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Cox6cQ9CPQ1 76 aa8.3□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Ssbp1Q9CYR0 152 aaKnown RBP8.3□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Ube2cQ9D1C1 179 aa8.3□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Med13Q5SWW4 2171 aa8.29□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Lynx1P0DP60 116 aa8.29□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Lamtor2Q9JHS3 125 aa8.29□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 SeboxP70368 190 aa8.29□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Trav2Q5R1I9 109 aa8.29□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Obox1Q9D350 204 aa8.29□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Spcs1Q9D958 161 aa8.29□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Gtsf1Q9DAN6 167 aa8.29□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Gm33815A0A087WNV3 176 aa8.29□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Vamp8O70404 101 aa8.29□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 P01724 129 aa8.29□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Cox8bP48772 70 aa8.29□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Lrcol1Q3URS3 161 aa8.29□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Trav6d-7A0A075B6B0 112 aa8.29□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Fbxl7Q5BJ29 491 aa8.29□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Hist2h2beQ64524 126 aa8.29□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Olfr761Q7TRJ0 323 aa8.29□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Fam216bQ8CC14 138 aa8.29□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Tac4Q99N14 128 aa8.29□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Mrpl53Q9D1H8 118 aaKnown RBP8.29□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Arhgap21Q6DFV3 1944 aa8.29□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Dock7Q8R1A4 2130 aaKnown RBP8.28□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Ighv1-55A0A075B5W6 117 aa8.28□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Klf14Q19A41 325 aa8.28□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 A230072I06RikQ3UUJ8 172 aa8.28□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Znf664Q4VA44 261 aa8.28□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Gm12253Q5NC48 229 aa8.28□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 VsirQ9D659 308 aa8.28□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Dock9Q8BIK4 2055 aa8.28□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Igkv4-91A0A075B5L2 119 aa8.28□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Gm6812B1AXU1 112 aa8.28□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 1700020N15RikL7MTX3 112 aa8.28□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 P01812 117 aa8.28□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Gpx7Q99LJ6 186 aa8.28□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Atp6v0e1Q9CQD8 81 aa8.28□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 RhohQ9D3G9 191 aa8.28□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 OtorQ9JIE3 128 aa8.28□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Tomm40Q9QYA2 361 aa8.28□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 A0A1Y7VMQ4 148 aa8.28□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Olfr322Q5NCC8 327 aa8.28□□□□□ -1.08
Ccdc40-201ENSMUST00000035935 Asxl3Q8C4A5 2259 aa8.27□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Trav7-5A0A0G2JFX6 112 aa8.27□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 NrepQ07475 68 aa8.27□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Gm15217A2CG07 155 aa8.27□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 P03980 138 aa8.27□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Zfp36l1P23950 338 aa8.27□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Hist1h1tQ07133 208 aa8.27□□□□□ -1.09
Ccdc40-201ENSMUST00000035935 Klhdc1Q80YG3 406 aa8.27□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 73 ms