RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Tcrg-C1A0A075B5Z0 172 aa8.28□□□□□ -1.08
Ubr1-201ENSMUST00000028728 P01655 112 aa8.28□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Defa4P28311 92 aa8.28□□□□□ -1.08
Ubr1-201ENSMUST00000028728 A930003A15RikQ3U552 87 aa8.28□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Trav7d-3Q5R1I1 112 aa8.28□□□□□ -1.08
Ubr1-201ENSMUST00000028728 P01783 136 aa8.28□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Defa-rs2P17534 91 aa8.28□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Tpsab1Q02844 273 aa8.28□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Ube2d2bQ6ZWY6 147 aa8.28□□□□□ -1.08
Ubr1-201ENSMUST00000028728 D930007J09RikQ9D2K6 131 aa8.28□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Bcorl1A2AQH4 1781 aa8.28□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Cd5P13379 494 aa8.28□□□□□ -1.08
Ubr1-201ENSMUST00000028728 KncnQ307W7 124 aa8.28□□□□□ -1.08
Ubr1-201ENSMUST00000028728 8030423J24RikQ9CX45 142 aa8.28□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Trav6-6A0A075B603 114 aa8.28□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Reg1P43137 165 aa8.28□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Tmem190Q9D2E9 166 aa8.28□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Gm867A0A1W2P7T4 151 aa8.28□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Hbb-b2P02089 147 aa8.28□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Gm10521E9PZK0 135 aa8.27□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Gm19345G3UYD9 124 aa8.27□□□□□ -1.08
Ubr1-201ENSMUST00000028728 PmvkQ9D1G2 192 aa8.27□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Ighv1-7A0A075B5T7 117 aa8.27□□□□□ -1.09
Ubr1-201ENSMUST00000028728 P01736 120 aa8.27□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Gm16503Q8C6M9 103 aa8.27□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Inafm1E9PV59 130 aa8.27□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Gm5129F6YHA9 99 aa8.27□□□□□ -1.09
Ubr1-201ENSMUST00000028728 P0C1Z5 52 aa8.27□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Samd5Q3V1H9 173 aa8.27□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Gm904Q3V2L5 102 aa8.27□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Baz2aQ91YE5 1889 aaKnown RBP8.27□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Trav21-dv12A0A075B6C4 109 aa8.27□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Ms4a8Q99N10 290 aa8.27□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Rnf138Q9CQE0 245 aaKnown RBP8.27□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Reg4Q9D8G5 157 aa8.27□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Ighv1-34A0A075B5V2 117 aa8.27□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Trbv17A0A140T8P8 114 aa8.27□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Cpsf4lE9Q2N0 280 aa8.27□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Gm10188Q3V432 135 aa8.27□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Qrich2A0A140LIY9 2337 aa8.27□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Mllt11P97783 90 aa8.26□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Trav14n-2A0A0G2JDF5 121 aa8.26□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Ccl25O35903 144 aa8.26□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Rpl32-psP17932 135 aa8.26□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Ube2zQ3UE37 356 aa8.26□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Nhlrc1Q8BR37 401 aa8.26□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Exph5Q0VAV2 1960 aa8.26□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Igkv4-63A0A0G2JFU6 117 aa8.26□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Ss18Q62280 418 aa8.26□□□□□ -1.09
Ubr1-201ENSMUST00000028728 RhohQ9D3G9 191 aa8.26□□□□□ -1.09
Ubr1-201ENSMUST00000028728 PpbpQ9EQI5 113 aa8.26□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Ros1Q78DX7 2340 aa8.26□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Oxld1Q9CR10 201 aa8.26□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Dock10Q8BZN6 2150 aa8.26□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Wdr86D3Z757 380 aa8.26□□□□□ -1.09
Ubr1-201ENSMUST00000028728 AtrxQ61687 2476 aaKnown RBP8.26□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Gm33815A0A087WNV3 176 aa8.26□□□□□ -1.09
Ubr1-201ENSMUST00000028728 C1qtnf5Q8K479 243 aa8.26□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Tomm6Q9CQN3 74 aa8.26□□□□□ -1.09
Ubr1-201ENSMUST00000028728 AY761184Q9D848 116 aa8.26□□□□□ -1.09
Ubr1-201ENSMUST00000028728 LctF8VPT3 1931 aa8.25□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Tcrg-C3L7N479 172 aa8.25□□□□□ -1.09
Ubr1-201ENSMUST00000028728 P03985 172 aa8.25□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Gm10767Q3TQP0 103 aa8.25□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Heatr1G3X9B1 2143 aaKnown RBP8.25□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Ighv1-22A0A075B5U7 117 aa8.25□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Trav12d-3A0A075B6A4 115 aa8.25□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Gm29423A0A087WRM1 55 aa8.25□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Ubald2Q8BQH4 164 aa8.25□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Rs1Q9Z1L4 224 aa8.25□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Trav14-3A0A075B607 120 aa8.25□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Folr2Q05685 251 aa8.25□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Znhit1Q8R331 154 aa8.25□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Q80X32 188 aaKnown RBP8.25□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Igkv12-89A0A0G2JGW8 112 aa8.25□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Igkv14-111A0A140T8P9 117 aa8.25□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Spint3Q3UW09 88 aa8.25□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Gtsf1Q9DAN6 167 aa8.25□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Cr2P19070 1025 aa8.24□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Cox11Q6P8I6 275 aa8.24□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Slc17a9Q8VCL5 447 aa8.24□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Ube2wQ8VDW4 151 aa8.24□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Med13Q5SWW4 2171 aa8.24□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Gm8251F6VUT6 1994 aa8.24□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Dock3Q8CIQ7 2027 aa8.24□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Trav4n-4A0A075B615 110 aa8.24□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Gm5294J3QP53 216 aa8.24□□□□□ -1.09
Ubr1-201ENSMUST00000028728 CckP09240 115 aa8.24□□□□□ -1.09
Ubr1-201ENSMUST00000028728 P18526 117 aa8.24□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Rnf144bQ8BKD6 301 aa8.24□□□□□ -1.09
Ubr1-201ENSMUST00000028728 C330021F23RikQ8C7T0 141 aa8.24□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Gm28778A0A087WSK7 233 aa8.24□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Gm43517E9PYS1 339 aa8.24□□□□□ -1.09
Ubr1-201ENSMUST00000028728 SelenokQ9JLJ1 94 aa8.24□□□□□ -1.09
Ubr1-201ENSMUST00000028728 PolP10400 120 aa8.24□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Gm9944Q8C559 102 aa8.24□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Gm5089A1L3C8 106 aa8.24□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Wfdc9Q3UW41 83 aa8.24□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Rbfox3Q8BIF2 374 aa8.24□□□□□ -1.09
Ubr1-201ENSMUST00000028728 Them7Q9DCP4 223 aa8.24□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 815.8 ms