RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Olfr1336Q8VGH5 314 aa12.99□□□□□ -0.33
Shh-201ENSMUST00000002708 Nsun4C4P6S0 806 aaKnown RBP12.99□□□□□ -0.33
Shh-201ENSMUST00000002708 B430305J03RikQ8BQQ8 176 aa12.99□□□□□ -0.33
Shh-201ENSMUST00000002708 Olfr976Q8VF15 326 aa12.99□□□□□ -0.33
Shh-201ENSMUST00000002708 Olfr1012Q8VFJ7 311 aa12.99□□□□□ -0.33
Shh-201ENSMUST00000002708 E030018B13RikJ3QMS9 113 aa12.98□□□□□ -0.33
Shh-201ENSMUST00000002708 Fabp6P51162 128 aa12.98□□□□□ -0.33
Shh-201ENSMUST00000002708 SrstQ06666 185 aa12.98□□□□□ -0.33
Shh-201ENSMUST00000002708 Cd5P13379 494 aa12.98□□□□□ -0.33
Shh-201ENSMUST00000002708 Gsx1P31315 261 aa12.98□□□□□ -0.33
Shh-201ENSMUST00000002708 Ssbp4Q3U4B1 363 aa12.98□□□□□ -0.33
Shh-201ENSMUST00000002708 Spata46Q4FZF2 204 aa12.98□□□□□ -0.33
Shh-201ENSMUST00000002708 Hnrnpa3Q8BG05 379 aaKnown RBP12.98□□□□□ -0.33
Shh-201ENSMUST00000002708 Znf787Q8BIF9 381 aa12.98□□□□□ -0.33
Shh-201ENSMUST00000002708 9130230L23RikQ8CC80 163 aa12.98□□□□□ -0.33
Shh-201ENSMUST00000002708 Osr1Q9WVG7 266 aa12.98□□□□□ -0.33
Shh-201ENSMUST00000002708 Ighv1-16A0A075B5U1 98 aa12.98□□□□□ -0.33
Shh-201ENSMUST00000002708 Rhox7bA6PW38 321 aa12.98□□□□□ -0.33
Shh-201ENSMUST00000002708 Vmn1r60G3UY47 300 aa12.98□□□□□ -0.33
Shh-201ENSMUST00000002708 Gata4Q08369 441 aa12.98□□□□□ -0.33
Shh-201ENSMUST00000002708 Q9CR34 168 aa12.98□□□□□ -0.33
Shh-201ENSMUST00000002708 Fam241bQ9D882 120 aa12.98□□□□□ -0.33
Shh-201ENSMUST00000002708 Saa3P04918 122 aa12.97□□□□□ -0.33
Shh-201ENSMUST00000002708 BtcQ05928 177 aa12.97□□□□□ -0.33
Shh-201ENSMUST00000002708 Ramp1Q9WTJ5 148 aa12.97□□□□□ -0.33
Shh-201ENSMUST00000002708 Ighv1-81A0A075B5Y4 117 aa12.97□□□□□ -0.33
Shh-201ENSMUST00000002708 Gm10073E9Q3T0 114 aa12.97□□□□□ -0.33
Shh-201ENSMUST00000002708 Cdkn1aP39689 159 aa12.97□□□□□ -0.33
Shh-201ENSMUST00000002708 Bsph1Q3UW26 133 aa12.97□□□□□ -0.33
Shh-201ENSMUST00000002708 Fam206aQ80ZQ9 193 aaKnown RBP12.97□□□□□ -0.33
Shh-201ENSMUST00000002708 Tmem177Q8BPE4 311 aa12.97□□□□□ -0.33
Shh-201ENSMUST00000002708 Tmem189Q99LQ7 271 aa12.97□□□□□ -0.33
Shh-201ENSMUST00000002708 Ovol1Q9WTJ2 267 aa12.97□□□□□ -0.33
Shh-201ENSMUST00000002708 PdfS4R2K0 231 aa12.97□□□□□ -0.33
Shh-201ENSMUST00000002708 AcanQ61282 2132 aaKnown RBP12.96□□□□□ -0.33
Shh-201ENSMUST00000002708 TfpiO54819 306 aa12.96□□□□□ -0.33
Shh-201ENSMUST00000002708 Gm10188Q3V432 135 aa12.96□□□□□ -0.33
Shh-201ENSMUST00000002708 Ighv9-4A0A0A6YWH6 117 aa12.96□□□□□ -0.34
Shh-201ENSMUST00000002708 Trav23A0A0G2JG17 115 aa12.96□□□□□ -0.34
Shh-201ENSMUST00000002708 Gm45623A0A1B0GSF6 103 aa12.96□□□□□ -0.34
Shh-201ENSMUST00000002708 Plcxd2B2RXA1 340 aa12.96□□□□□ -0.34
Shh-201ENSMUST00000002708 Scgb1b19F6WYW0 93 aa12.96□□□□□ -0.34
Shh-201ENSMUST00000002708 Rnf5O35445 180 aa12.96□□□□□ -0.34
Shh-201ENSMUST00000002708 Reg1P43137 165 aa12.96□□□□□ -0.34
Shh-201ENSMUST00000002708 Fam216bQ8CC14 138 aa12.96□□□□□ -0.34
Shh-201ENSMUST00000002708 Fxyd4Q9D2W0 88 aa12.96□□□□□ -0.34
Shh-201ENSMUST00000002708 Rnf212bD3Z423 297 aa12.95□□□□□ -0.34
Shh-201ENSMUST00000002708 Gm6871L7N248 545 aa12.95□□□□□ -0.34
Shh-201ENSMUST00000002708 Cphx2Q8BX39 182 aa12.95□□□□□ -0.34
Shh-201ENSMUST00000002708 Olfr1256Q8VGP1 306 aa12.95□□□□□ -0.34
Shh-201ENSMUST00000002708 Ammecr1Q9JHT5 344 aaKnown RBP12.95□□□□□ -0.34
Shh-201ENSMUST00000002708 Npc2Q9Z0J0 149 aa12.95□□□□□ -0.34
Shh-201ENSMUST00000002708 Ighv1-62-2A0A0A6YXZ4 119 aa12.95□□□□□ -0.34
Shh-201ENSMUST00000002708 BokO35425 213 aa12.95□□□□□ -0.34
Shh-201ENSMUST00000002708 P01791 123 aa12.95□□□□□ -0.34
Shh-201ENSMUST00000002708 Arf6P62331 175 aa12.95□□□□□ -0.34
Shh-201ENSMUST00000002708 9130213A22RikQ3V3T2 120 aa12.95□□□□□ -0.34
Shh-201ENSMUST00000002708 Igfbpl1Q80W15 270 aa12.95□□□□□ -0.34
Shh-201ENSMUST00000002708 PgpQ8CHP8 321 aa12.95□□□□□ -0.34
Shh-201ENSMUST00000002708 Errfi1Q99JZ7 461 aa12.95□□□□□ -0.34
Shh-201ENSMUST00000002708 Necap2Q9D1J1 266 aa12.95□□□□□ -0.34
Shh-201ENSMUST00000002708 Cnih1O35372 144 aa12.94□□□□□ -0.34
Shh-201ENSMUST00000002708 Ca1P13634 261 aa12.94□□□□□ -0.34
Shh-201ENSMUST00000002708 Gfra1P97785 468 aa12.94□□□□□ -0.34
Shh-201ENSMUST00000002708 Defb20Q30KP3 96 aa12.94□□□□□ -0.34
Shh-201ENSMUST00000002708 Olfr1380Q7TQT5 311 aa12.94□□□□□ -0.34
Shh-201ENSMUST00000002708 Them7Q9DCP4 223 aa12.94□□□□□ -0.34
Shh-201ENSMUST00000002708 GlmpQ9JHJ3 404 aa12.94□□□□□ -0.34
Shh-201ENSMUST00000002708 Timm23Q9WTQ8 209 aa12.94□□□□□ -0.34
Shh-201ENSMUST00000002708 Med13lQ6JPI3 2207 aa12.94□□□□□ -0.34
Shh-201ENSMUST00000002708 Gm45213A0A0U1RNZ6 101 aa12.94□□□□□ -0.34
Shh-201ENSMUST00000002708 Olfr1192-ps1A0A1L1SRD7 309 aa12.94□□□□□ -0.34
Shh-201ENSMUST00000002708 Zfp983E9PUT0 460 aa12.94□□□□□ -0.34
Shh-201ENSMUST00000002708 Brs3O54798 399 aa12.94□□□□□ -0.34
Shh-201ENSMUST00000002708 Emp2O88662 172 aa12.94□□□□□ -0.34
Shh-201ENSMUST00000002708 Tmem241Q3UME2 297 aa12.94□□□□□ -0.34
Shh-201ENSMUST00000002708 Trav14d-1A0A075B6B1 121 aa12.94□□□□□ -0.34
Shh-201ENSMUST00000002708 Obox7Q4KL20 218 aa12.94□□□□□ -0.34
Shh-201ENSMUST00000002708 EsdQ9R0P3 282 aa12.94□□□□□ -0.34
Shh-201ENSMUST00000002708 Gm1968Q3T9I3 115 aa12.93□□□□□ -0.34
Shh-201ENSMUST00000002708 Srd5a2Q99N99 254 aa12.93□□□□□ -0.34
Shh-201ENSMUST00000002708 Spg11Q3UHA3 2430 aa12.93□□□□□ -0.34
Shh-201ENSMUST00000002708 Armcx4E9PWM3 2356 aa12.93□□□□□ -0.34
Shh-201ENSMUST00000002708 Gm6096D3YTY6 151 aa12.93□□□□□ -0.34
Shh-201ENSMUST00000002708 Gm15056F6ZR08 88 aa12.93□□□□□ -0.34
Shh-201ENSMUST00000002708 Spsb3Q571F5 354 aa12.93□□□□□ -0.34
Shh-201ENSMUST00000002708 Trappc1Q5NCF2 145 aa12.93□□□□□ -0.34
Shh-201ENSMUST00000002708 Higd1cQ76I25 96 aa12.93□□□□□ -0.34
Shh-201ENSMUST00000002708 Dnajb12Q9QYI4 376 aaKnown RBP12.93□□□□□ -0.34
Shh-201ENSMUST00000002708 Trav6-6A0A075B603 114 aa12.92□□□□□ -0.34
Shh-201ENSMUST00000002708 Gm765B2RVL9 189 aa12.92□□□□□ -0.34
Shh-201ENSMUST00000002708 Gm2174F6ZVF2 133 aa12.92□□□□□ -0.34
Shh-201ENSMUST00000002708 Ccsmst1Q6RUT7 136 aa12.92□□□□□ -0.34
Shh-201ENSMUST00000002708 9230109A22RikQ8BHE6 111 aa12.92□□□□□ -0.34
Shh-201ENSMUST00000002708 Pygo1Q9D0P5 417 aa12.92□□□□□ -0.34
Shh-201ENSMUST00000002708 Gm17660B9UIU9 90 aa12.92□□□□□ -0.34
Shh-201ENSMUST00000002708 Lce6aD3YV94 81 aa12.92□□□□□ -0.34
Shh-201ENSMUST00000002708 Gm3512L7N206 146 aa12.92□□□□□ -0.34
Shh-201ENSMUST00000002708 Olfr761Q7TRJ0 323 aa12.92□□□□□ -0.34
Shh-201ENSMUST00000002708 Ndfip1Q8R0W6 221 aa12.92□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 95.1 ms