RNA–Protein interactions for RNA: ENST00000551855.1

CPNE8-208, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-208ENST00000551855 UBE2D4Q9Y2X8 147 aa0.12□□□□□ -2.39
CPNE8-208ENST00000551855 FSIP2Q5CZC0 6907 aa0.12□□□□□ -2.39
CPNE8-208ENST00000551855 GVINP1Q7Z2Y8 2422 aa0.12□□□□□ -2.39
CPNE8-208ENST00000551855 NKTRP30414 1462 aaKnown RBP0.11□□□□□ -2.39
CPNE8-208ENST00000551855 CHD6Q8TD26 2715 aa0.11□□□□□ -2.39
CPNE8-208ENST00000551855 TNXBP22105 4242 aa0.11□□□□□ -2.39
CPNE8-208ENST00000551855 LRRC37AA6NMS7 1700 aa0.11□□□□□ -2.39
CPNE8-208ENST00000551855 CPSF4LA6NMK7 179 aaKnown RBP0.11□□□□□ -2.39
CPNE8-208ENST00000551855 LELP1Q5T871 98 aa0.11□□□□□ -2.39
CPNE8-208ENST00000551855 USMG5Q96IX5 58 aa0.11□□□□□ -2.39
CPNE8-208ENST00000551855 KMT2AQ03164 3969 aa0.11□□□□□ -2.39
CPNE8-208ENST00000551855 PPLO60437 1756 aa0.11□□□□□ -2.39
CPNE8-208ENST00000551855 ALKQ9UM73 1620 aa0.1□□□□□ -2.39
CPNE8-208ENST00000551855 FAT2Q9NYQ8 4349 aa0.1□□□□□ -2.39
CPNE8-208ENST00000551855 IQCF6A8MYZ5 107 aa0.1□□□□□ -2.39
CPNE8-208ENST00000551855 CYB5AP00167 134 aa0.1□□□□□ -2.39
CPNE8-208ENST00000551855 HMGN2P05204 90 aaKnown RBP0.1□□□□□ -2.39
CPNE8-208ENST00000551855 GNG2P59768 71 aa0.1□□□□□ -2.39
CPNE8-208ENST00000551855 S100A16Q96FQ6 103 aaKnown RBP0.1□□□□□ -2.39
CPNE8-208ENST00000551855 ZNF831Q5JPB2 1677 aa0.1□□□□□ -2.39
CPNE8-208ENST00000551855 IQSEC2Q5JU85 1478 aa0.1□□□□□ -2.39
CPNE8-208ENST00000551855 HMGN3Q15651 99 aa0.09□□□□□ -2.4
CPNE8-208ENST00000551855 TDRG1Q3Y452 100 aa0.09□□□□□ -2.4
CPNE8-208ENST00000551855 HIVEP3Q5T1R4 2406 aa0.09□□□□□ -2.4
CPNE8-208ENST00000551855 IGSF10Q6WRI0 2623 aa0.09□□□□□ -2.4
CPNE8-208ENST00000551855 TENM4Q6N022 2769 aa0.09□□□□□ -2.4
CPNE8-208ENST00000551855 ABCC3O15438 1527 aa0.08□□□□□ -2.4
CPNE8-208ENST00000551855 LRRC7Q96NW7 1537 aa0.08□□□□□ -2.4
CPNE8-208ENST00000551855 CSPG4Q6UVK1 2322 aa0.08□□□□□ -2.4
CPNE8-208ENST00000551855 QSER1Q2KHR3 1735 aa0.08□□□□□ -2.4
CPNE8-208ENST00000551855 SUPT6HQ7KZ85 1726 aaKnown RBP0.08□□□□□ -2.4
CPNE8-208ENST00000551855 COX8AP10176 69 aa0.08□□□□□ -2.4
CPNE8-208ENST00000551855 H1FX-AS1Q4G0G2 97 aa0.08□□□□□ -2.4
CPNE8-208ENST00000551855 NMSQ5H8A3 153 aa0.08□□□□□ -2.4
CPNE8-208ENST00000551855 PYY3Q5JQD4 70 aa0.08□□□□□ -2.4
CPNE8-208ENST00000551855 KIF14Q15058 1648 aa0.08□□□□□ -2.4
CPNE8-208ENST00000551855 UBR3Q6ZT12 1888 aa0.07□□□□□ -2.4
CPNE8-208ENST00000551855 PKD1L1Q8TDX9 2849 aa0.07□□□□□ -2.4
CPNE8-208ENST00000551855 BCORQ6W2J9 1755 aa0.07□□□□□ -2.4
CPNE8-208ENST00000551855 I3L3M4 83 aa0.07□□□□□ -2.4
CPNE8-208ENST00000551855 SPRR2GQ9BYE4 73 aa0.07□□□□□ -2.4
CPNE8-208ENST00000551855 HUWE1Q7Z6Z7 4374 aaKnown RBP0.06□□□□□ -2.4
CPNE8-208ENST00000551855 COL7A1Q02388 2944 aa0.06□□□□□ -2.4
CPNE8-208ENST00000551855 SMIM11AP58511 58 aa0.06□□□□□ -2.4
CPNE8-208ENST00000551855 MRPL34Q9BQ48 92 aaKnown RBP0.06□□□□□ -2.4
CPNE8-208ENST00000551855 SPTY2D1-AS1A0A0U1RR47 76 aa0.05□□□□□ -2.4
CPNE8-208ENST00000551855 PVALEFA0A1B0GWK0 134 aa0.05□□□□□ -2.4
CPNE8-208ENST00000551855 LOC730098B7Z3J9 87 aa0.05□□□□□ -2.4
CPNE8-208ENST00000551855 ALKAL2Q6UX46 152 aa0.05□□□□□ -2.4
CPNE8-208ENST00000551855 PLIN4Q96Q06 1357 aa0.05□□□□□ -2.4
CPNE8-208ENST00000551855 HMCN2Q8NDA2 5059 aa0.05□□□□□ -2.4
CPNE8-208ENST00000551855 ATP7BP35670 1465 aa0.04□□□□□ -2.4
CPNE8-208ENST00000551855 CCDC141Q6ZP82 1450 aa0.04□□□□□ -2.4
CPNE8-208ENST00000551855 ABCA2Q9BZC7 2435 aa0.04□□□□□ -2.4
CPNE8-208ENST00000551855 CACNA1AO00555 2505 aa0.04□□□□□ -2.4
CPNE8-208ENST00000551855 MYMXA0A1B0GTQ4 84 aa0.04□□□□□ -2.4
CPNE8-208ENST00000551855 POLR1AO95602 1720 aaPredicted RBP0.04□□□□□ -2.4
CPNE8-208ENST00000551855 LTN1O94822 1766 aa0.04□□□□□ -2.4
CPNE8-208ENST00000551855 SSPOA2VEC9 5147 aa0.03□□□□□ -2.4
CPNE8-208ENST00000551855 MAP3K4Q9Y6R4 1608 aa0.03□□□□□ -2.4
CPNE8-208ENST00000551855 MYCBP2O75592 4640 aa0.03□□□□□ -2.4
CPNE8-208ENST00000551855 A0A1B0GUT8 65 aa0.03□□□□□ -2.4
CPNE8-208ENST00000551855 PLGLAQ15195 96 aa0.03□□□□□ -2.4
CPNE8-208ENST00000551855 MAGI2Q86UL8 1455 aa0.03□□□□□ -2.41
CPNE8-208ENST00000551855 DOT1LQ8TEK3 1739 aa0.02□□□□□ -2.41
CPNE8-208ENST00000551855 SPINK4O60575 86 aa0.02□□□□□ -2.41
CPNE8-208ENST00000551855 COX7BP24311 80 aa0.02□□□□□ -2.41
CPNE8-208ENST00000551855 HEPN1Q6WQI6 88 aa0.02□□□□□ -2.41
CPNE8-208ENST00000551855 ATRQ13535 2644 aa0.02□□□□□ -2.41
CPNE8-208ENST00000551855 PRKDCP78527 4128 aaKnown RBP0.02□□□□□ -2.41
CPNE8-208ENST00000551855 RB1CC1Q8TDY2 1594 aa0.02□□□□□ -2.41
CPNE8-208ENST00000551855 DIP2BQ9P265 1576 aa0.02□□□□□ -2.41
CPNE8-208ENST00000551855 DMBT1Q9UGM3 2413 aaPredicted RBP0.02□□□□□ -2.41
CPNE8-208ENST00000551855 SNRPFP62306 86 aaKnown RBP0.01□□□□□ -2.41
CPNE8-208ENST00000551855 GAFA1Q96PS6 74 aa0.01□□□□□ -2.41
CPNE8-208ENST00000551855 USP32Q8NFA0 1604 aa0.01□□□□□ -2.41
CPNE8-208ENST00000551855 HSPG2P98160 4391 aa0.01□□□□□ -2.41
CPNE8-208ENST00000551855 MACF1Q9UPN3 7388 aaKnown RBP0□□□□□ -2.41
CPNE8-208ENST00000551855 LPAP08519 4548 aa0□□□□□ -2.41
CPNE8-208ENST00000551855 TRAV21A0A0B4J279 112 aa0□□□□□ -2.41
CPNE8-208ENST00000551855 SPRR2DP22532 72 aa0□□□□□ -2.41
CPNE8-208ENST00000551855 PREX1Q8TCU6 1659 aa0□□□□□ -2.41
CPNE8-208ENST00000551855 MED14O60244 1454 aa-0.01□□□□□ -2.41
CPNE8-208ENST00000551855 CEBPZOSA8MTT3 80 aa-0.01□□□□□ -2.41
CPNE8-208ENST00000551855 LINC00643Q86TS7 51 aa-0.01□□□□□ -2.41
CPNE8-208ENST00000551855 WFDC9Q8NEX5 89 aa-0.01□□□□□ -2.41
CPNE8-208ENST00000551855 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.02□□□□□ -2.41
CPNE8-208ENST00000551855 UACAQ9BZF9 1416 aa-0.02□□□□□ -2.41
CPNE8-208ENST00000551855 C4AP0C0L4 1744 aa-0.02□□□□□ -2.41
CPNE8-208ENST00000551855 C4BP0C0L5 1744 aa-0.02□□□□□ -2.41
CPNE8-208ENST00000551855 WFDC13Q8IUB5 93 aa-0.03□□□□□ -2.41
CPNE8-208ENST00000551855 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.03□□□□□ -2.41
CPNE8-208ENST00000551855 PTPN13Q12923 2485 aa-0.03□□□□□ -2.41
CPNE8-208ENST00000551855 PIK3C2BO00750 1634 aa-0.03□□□□□ -2.41
CPNE8-208ENST00000551855 NCOA2Q15596 1464 aa-0.03□□□□□ -2.41
CPNE8-208ENST00000551855 ALMS1Q8TCU4 4167 aa-0.04□□□□□ -2.42
CPNE8-208ENST00000551855 LRRC9Q6ZRR7 1453 aa-0.04□□□□□ -2.42
CPNE8-208ENST00000551855 TIAM2Q8IVF5 1701 aa-0.04□□□□□ -2.42
CPNE8-208ENST00000551855 CLIP1P30622 1438 aa-0.04□□□□□ -2.42
CPNE8-208ENST00000551855 SPTA1P02549 2419 aa-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms