RNA–Protein interactions for RNA: ENST00000518426.1

CLVS1-202, Transcript of clavesin 1, humanhuman

TSL 4

Gene CLVS1, Length 312 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLVS1-202ENST00000518426 PPLO60437 1756 aa0.22□□□□□ -2.37
CLVS1-202ENST00000518426 SYNE2Q8WXH0 6885 aaKnown RBP0.22□□□□□ -2.37
CLVS1-202ENST00000518426 SAMD9Q5K651 1589 aa0.21□□□□□ -2.38
CLVS1-202ENST00000518426 IGLC2P0DOY2 106 aa0.21□□□□□ -2.38
CLVS1-202ENST00000518426 IGLC3P0DOY3 106 aa0.21□□□□□ -2.38
CLVS1-202ENST00000518426 KLK9Q2XQG4 91 aa0.21□□□□□ -2.38
CLVS1-202ENST00000518426 PYY3Q5JQD4 70 aa0.21□□□□□ -2.38
CLVS1-202ENST00000518426 COL7A1Q02388 2944 aa0.21□□□□□ -2.38
CLVS1-202ENST00000518426 RGPD2P0DJD1 1756 aa0.21□□□□□ -2.38
CLVS1-202ENST00000518426 CPSF4LA6NMK7 179 aaKnown RBP0.2□□□□□ -2.38
CLVS1-202ENST00000518426 HMGN2P05204 90 aaKnown RBP0.2□□□□□ -2.38
CLVS1-202ENST00000518426 APLNQ9ULZ1 77 aa0.2□□□□□ -2.38
CLVS1-202ENST00000518426 IQSEC2Q5JU85 1478 aa0.2□□□□□ -2.38
CLVS1-202ENST00000518426 DMBT1Q9UGM3 2413 aaPredicted RBP0.19□□□□□ -2.38
CLVS1-202ENST00000518426 I3L3M4 83 aa0.19□□□□□ -2.38
CLVS1-202ENST00000518426 SPINK4O60575 86 aa0.19□□□□□ -2.38
CLVS1-202ENST00000518426 S100A16Q96FQ6 103 aaKnown RBP0.19□□□□□ -2.38
CLVS1-202ENST00000518426 CEP162Q5TB80 1403 aa0.19□□□□□ -2.38
CLVS1-202ENST00000518426 FSIP2Q5CZC0 6907 aa0.18□□□□□ -2.38
CLVS1-202ENST00000518426 PVALEFA0A1B0GWK0 134 aa0.18□□□□□ -2.38
CLVS1-202ENST00000518426 K7EP34 96 aa0.18□□□□□ -2.38
CLVS1-202ENST00000518426 GNG2P59768 71 aa0.18□□□□□ -2.38
CLVS1-202ENST00000518426 DEFB112Q30KQ8 113 aa0.18□□□□□ -2.38
CLVS1-202ENST00000518426 UBE2D4Q9Y2X8 147 aa0.18□□□□□ -2.38
CLVS1-202ENST00000518426 ABCC3O15438 1527 aa0.18□□□□□ -2.38
CLVS1-202ENST00000518426 BSNQ9UPA5 3926 aa0.18□□□□□ -2.38
CLVS1-202ENST00000518426 BCORQ6W2J9 1755 aa0.17□□□□□ -2.38
CLVS1-202ENST00000518426 CYB5AP00167 134 aa0.17□□□□□ -2.38
CLVS1-202ENST00000518426 ATRQ13535 2644 aa0.17□□□□□ -2.38
CLVS1-202ENST00000518426 QSER1Q2KHR3 1735 aa0.17□□□□□ -2.38
CLVS1-202ENST00000518426 NEXMIFQ5QGS0 1516 aa0.17□□□□□ -2.38
CLVS1-202ENST00000518426 PTPN13Q12923 2485 aa0.16□□□□□ -2.38
CLVS1-202ENST00000518426 ALKQ9UM73 1620 aa0.16□□□□□ -2.38
CLVS1-202ENST00000518426 NKTRP30414 1462 aaKnown RBP0.16□□□□□ -2.38
CLVS1-202ENST00000518426 HUWE1Q7Z6Z7 4374 aaKnown RBP0.16□□□□□ -2.38
CLVS1-202ENST00000518426 NMSQ5H8A3 153 aa0.16□□□□□ -2.38
CLVS1-202ENST00000518426 C9orf62Q8N4C0 152 aa0.16□□□□□ -2.38
CLVS1-202ENST00000518426 SPTA1P02549 2419 aa0.16□□□□□ -2.38
CLVS1-202ENST00000518426 PLIN4Q96Q06 1357 aa0.16□□□□□ -2.38
CLVS1-202ENST00000518426 RGPD1P0DJD0 1748 aa0.16□□□□□ -2.38
CLVS1-202ENST00000518426 SUPT6HQ7KZ85 1726 aaKnown RBP0.16□□□□□ -2.38
CLVS1-202ENST00000518426 FAT2Q9NYQ8 4349 aa0.15□□□□□ -2.38
CLVS1-202ENST00000518426 SPTY2D1-AS1A0A0U1RR47 76 aa0.15□□□□□ -2.39
CLVS1-202ENST00000518426 IQCF6A8MYZ5 107 aa0.15□□□□□ -2.39
CLVS1-202ENST00000518426 PLGLAQ15195 96 aa0.15□□□□□ -2.39
CLVS1-202ENST00000518426 LOC730098B7Z3J9 87 aa0.14□□□□□ -2.39
CLVS1-202ENST00000518426 PRM1P04553 51 aa0.14□□□□□ -2.39
CLVS1-202ENST00000518426 KMT2AQ03164 3969 aa0.14□□□□□ -2.39
CLVS1-202ENST00000518426 MYCBP2O75592 4640 aa0.14□□□□□ -2.39
CLVS1-202ENST00000518426 A0A1B0GUT8 65 aa0.13□□□□□ -2.39
CLVS1-202ENST00000518426 MRPL34Q9BQ48 92 aaKnown RBP0.13□□□□□ -2.39
CLVS1-202ENST00000518426 DCHS2Q6V1P9 2916 aa0.13□□□□□ -2.39
CLVS1-202ENST00000518426 KIF14Q15058 1648 aa0.13□□□□□ -2.39
CLVS1-202ENST00000518426 LTN1O94822 1766 aa0.12□□□□□ -2.39
CLVS1-202ENST00000518426 MYMXA0A1B0GTQ4 84 aa0.12□□□□□ -2.39
CLVS1-202ENST00000518426 SNRPFP62306 86 aaKnown RBP0.12□□□□□ -2.39
CLVS1-202ENST00000518426 H1FX-AS1Q4G0G2 97 aa0.12□□□□□ -2.39
CLVS1-202ENST00000518426 SPRR2GQ9BYE4 73 aa0.12□□□□□ -2.39
CLVS1-202ENST00000518426 TMEM131LA2VDJ0 1609 aa0.12□□□□□ -2.39
CLVS1-202ENST00000518426 RABAC1Q9UI14 185 aa0.11□□□□□ -2.39
CLVS1-202ENST00000518426 LRRC7Q96NW7 1537 aa0.11□□□□□ -2.39
CLVS1-202ENST00000518426 CACNA1AO00555 2505 aa0.11□□□□□ -2.39
CLVS1-202ENST00000518426 WNK1Q9H4A3 2382 aa0.1□□□□□ -2.39
CLVS1-202ENST00000518426 MAP3K4Q9Y6R4 1608 aa0.1□□□□□ -2.39
CLVS1-202ENST00000518426 COX7BP24311 80 aa0.1□□□□□ -2.39
CLVS1-202ENST00000518426 HEPN1Q6WQI6 88 aa0.1□□□□□ -2.39
CLVS1-202ENST00000518426 LINC00643Q86TS7 51 aa0.1□□□□□ -2.39
CLVS1-202ENST00000518426 HMCN2Q8NDA2 5059 aa0.1□□□□□ -2.39
CLVS1-202ENST00000518426 ATP7BP35670 1465 aa0.1□□□□□ -2.39
CLVS1-202ENST00000518426 TDRG1Q3Y452 100 aa0.09□□□□□ -2.4
CLVS1-202ENST00000518426 GAFA1Q96PS6 74 aa0.09□□□□□ -2.4
CLVS1-202ENST00000518426 RB1CC1Q8TDY2 1594 aa0.09□□□□□ -2.4
CLVS1-202ENST00000518426 MAGI2Q86UL8 1455 aa0.09□□□□□ -2.4
CLVS1-202ENST00000518426 MAP1BP46821 2468 aaKnown RBP0.08□□□□□ -2.4
CLVS1-202ENST00000518426 TNXBP22105 4242 aa0.08□□□□□ -2.4
CLVS1-202ENST00000518426 CLIP1P30622 1438 aa0.08□□□□□ -2.4
CLVS1-202ENST00000518426 CCL22O00626 93 aa0.08□□□□□ -2.4
CLVS1-202ENST00000518426 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.08□□□□□ -2.4
CLVS1-202ENST00000518426 FLNCQ14315 2725 aa0.07□□□□□ -2.4
CLVS1-202ENST00000518426 CHD8Q9HCK8 2581 aa0.07□□□□□ -2.4
CLVS1-202ENST00000518426 POLR1AO95602 1720 aaPredicted RBP0.07□□□□□ -2.4
CLVS1-202ENST00000518426 TIAM2Q8IVF5 1701 aa0.07□□□□□ -2.4
CLVS1-202ENST00000518426 UACAQ9BZF9 1416 aa0.07□□□□□ -2.4
CLVS1-202ENST00000518426 CEBPZOSA8MTT3 80 aa0.07□□□□□ -2.4
CLVS1-202ENST00000518426 SPRR2DP22532 72 aa0.07□□□□□ -2.4
CLVS1-202ENST00000518426 TRAV21A0A0B4J279 112 aa0.06□□□□□ -2.4
CLVS1-202ENST00000518426 ACYP1P07311 99 aa0.06□□□□□ -2.4
CLVS1-202ENST00000518426 LELP1Q5T871 98 aa0.06□□□□□ -2.4
CLVS1-202ENST00000518426 SSPOA2VEC9 5147 aa0.06□□□□□ -2.4
CLVS1-202ENST00000518426 MACF1Q9UPN3 7388 aaKnown RBP0.06□□□□□ -2.4
CLVS1-202ENST00000518426 PRKDCP78527 4128 aaKnown RBP0.06□□□□□ -2.4
CLVS1-202ENST00000518426 PREX1Q8TCU6 1659 aa0.05□□□□□ -2.4
CLVS1-202ENST00000518426 RGPD8O14715 1765 aaPredicted RBP0.05□□□□□ -2.4
CLVS1-202ENST00000518426 RGPD5Q99666 1765 aa0.05□□□□□ -2.4
CLVS1-202ENST00000518426 KANTRA0A1W2PQU2 76 aa0.05□□□□□ -2.4
CLVS1-202ENST00000518426 RPL38P63173 70 aaKnown RBP0.05□□□□□ -2.4
CLVS1-202ENST00000518426 WFDC9Q8NEX5 89 aa0.05□□□□□ -2.4
CLVS1-202ENST00000518426 APC2O95996 2303 aa0.04□□□□□ -2.4
CLVS1-202ENST00000518426 LPAP08519 4548 aa0.04□□□□□ -2.4
CLVS1-202ENST00000518426 CDKN2A-AS1Q9UH64 79 aa0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms