RNA–Protein interactions for RNA: ENST00000518426.1

CLVS1-202, Transcript of clavesin 1, humanhuman

TSL 4

Gene CLVS1, Length 312 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLVS1-202ENST00000518426 AEBP2Q6ZN18 517 aaPredicted RBP15.64■□□□□ 0.09
CLVS1-202ENST00000518426 CHIC1Q5VXU3 224 aa14.65□□□□□ -0.06
CLVS1-202ENST00000518426 SENP3Q9H4L4 574 aaPredicted RBP13.45□□□□□ -0.26
CLVS1-202ENST00000518426 PHF23Q9BUL5 403 aaPredicted RBP13.19□□□□□ -0.3
CLVS1-202ENST00000518426 POTEDQ86YR6 584 aa12.61□□□□□ -0.39
CLVS1-202ENST00000518426 FOXD1Q16676 465 aa12.59□□□□□ -0.39
CLVS1-202ENST00000518426 MSH5O43196 834 aa12.01□□□□□ -0.49
CLVS1-202ENST00000518426 PIAS4Q8N2W9 510 aaPredicted RBP11.66□□□□□ -0.54
CLVS1-202ENST00000518426 PPP6R1Q9UPN7 881 aa11.35□□□□□ -0.59
CLVS1-202ENST00000518426 ADRA2BP18089 450 aa11.29□□□□□ -0.6
CLVS1-202ENST00000518426 PLPPR3Q6T4P5 718 aa11.24□□□□□ -0.61
CLVS1-202ENST00000518426 CACNB1Q02641 598 aaPredicted RBP10.64□□□□□ -0.71
CLVS1-202ENST00000518426 DMRT2Q9Y5R5 561 aa10.58□□□□□ -0.72
CLVS1-202ENST00000518426 MAPK8IP2Q13387 824 aaPredicted RBP10.54□□□□□ -0.72
CLVS1-202ENST00000518426 SCAF1Q9H7N4 1312 aaKnown RBP10.35□□□□□ -0.75
CLVS1-202ENST00000518426 DCAF8L1A6NGE4 600 aa10.21□□□□□ -0.77
CLVS1-202ENST00000518426 RNF39Q9H2S5 420 aa10.17□□□□□ -0.78
CLVS1-202ENST00000518426 KCNA4P22459 653 aa10.05□□□□□ -0.8
CLVS1-202ENST00000518426 C1QBPQ07021 282 aaKnown RBP10.01□□□□□ -0.81
CLVS1-202ENST00000518426 HOXD11P31277 338 aaPredicted RBP9.97□□□□□ -0.81
CLVS1-202ENST00000518426 EHMT2Q96KQ7 1210 aa9.95□□□□□ -0.82
CLVS1-202ENST00000518426 POTEHQ6S545 545 aa9.79□□□□□ -0.84
CLVS1-202ENST00000518426 PPP4R3CPQ6ZMV5 832 aa9.79□□□□□ -0.84
CLVS1-202ENST00000518426 RNF216Q9NWF9 866 aaPredicted RBP9.77□□□□□ -0.85
CLVS1-202ENST00000518426 CNKSR2Q8WXI2 1034 aa9.73□□□□□ -0.85
CLVS1-202ENST00000518426 DNAJC5BQ9UF47 199 aa9.73□□□□□ -0.85
CLVS1-202ENST00000518426 SLC4A1APQ9BWU0 796 aaKnown RBP9.65□□□□□ -0.86
CLVS1-202ENST00000518426 NCBP3Q53F19 620 aaKnown RBP9.61□□□□□ -0.87
CLVS1-202ENST00000518426 CSRNP3Q8WYN3 585 aa9.57□□□□□ -0.88
CLVS1-202ENST00000518426 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.54□□□□□ -0.88
CLVS1-202ENST00000518426 NPM3O75607 178 aaKnown RBP9.49□□□□□ -0.89
CLVS1-202ENST00000518426 DSG3P32926 999 aa9.36□□□□□ -0.91
CLVS1-202ENST00000518426 CAPN15O75808 1086 aa9.32□□□□□ -0.92
CLVS1-202ENST00000518426 SPINK5Q9NQ38 1064 aaPredicted RBP9.28□□□□□ -0.92
CLVS1-202ENST00000518426 ZBTB22O15209 634 aa9.25□□□□□ -0.93
CLVS1-202ENST00000518426 U3KPZ7 1027 aaPredicted RBP9.25□□□□□ -0.93
CLVS1-202ENST00000518426 FOXD4L1Q9NU39 408 aa9.11□□□□□ -0.95
CLVS1-202ENST00000518426 ABCB7O75027 752 aa9.05□□□□□ -0.96
CLVS1-202ENST00000518426 TRHP20396 242 aaPredicted RBP9.04□□□□□ -0.96
CLVS1-202ENST00000518426 ZNF219Q9P2Y4 722 aaPredicted RBP8.99□□□□□ -0.97
CLVS1-202ENST00000518426 APLP2Q06481 763 aa8.98□□□□□ -0.97
CLVS1-202ENST00000518426 CHRDL2Q6WN34 429 aa8.96□□□□□ -0.98
CLVS1-202ENST00000518426 RBM42Q9BTD8 480 aaKnown RBP8.96□□□□□ -0.98
CLVS1-202ENST00000518426 SP7Q8TDD2 431 aaPredicted RBP8.92□□□□□ -0.98
CLVS1-202ENST00000518426 SLC4A2P04920 1241 aa8.84□□□□□ -0.99
CLVS1-202ENST00000518426 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.82□□□□□ -1
CLVS1-202ENST00000518426 HNRNPUL2Q1KMD3 747 aaKnown RBP8.82□□□□□ -1
CLVS1-202ENST00000518426 MYCNP04198 464 aaPredicted RBP8.75□□□□□ -1.01
CLVS1-202ENST00000518426 SAMD1Q6SPF0 538 aaPredicted RBP8.74□□□□□ -1.01
CLVS1-202ENST00000518426 ATXN8OSP0DMR3 200 aa8.7□□□□□ -1.02
CLVS1-202ENST00000518426 RTN4Q9NQC3 1192 aaKnown RBP8.67□□□□□ -1.02
CLVS1-202ENST00000518426 POLA2Q14181 598 aa8.66□□□□□ -1.02
CLVS1-202ENST00000518426 FKBP8Q14318 412 aa8.66□□□□□ -1.02
CLVS1-202ENST00000518426 AMER1Q5JTC6 1135 aaPredicted RBP8.65□□□□□ -1.02
CLVS1-202ENST00000518426 HAX1O00165 279 aa8.64□□□□□ -1.03
CLVS1-202ENST00000518426 PIP4P2Q8N4L2 257 aa8.64□□□□□ -1.03
CLVS1-202ENST00000518426 AKT1S1Q96B36 256 aa8.64□□□□□ -1.03
CLVS1-202ENST00000518426 SLC24A1O60721 1099 aa8.58□□□□□ -1.04
CLVS1-202ENST00000518426 REM2Q8IYK8 340 aaPredicted RBP8.55□□□□□ -1.04
CLVS1-202ENST00000518426 ATF5Q9Y2D1 282 aaPredicted RBP8.5□□□□□ -1.05
CLVS1-202ENST00000518426 FXR2P51116 673 aaKnown RBP eCLIP8.49□□□□□ -1.05
CLVS1-202ENST00000518426 PITPNM1O00562 1244 aa8.46□□□□□ -1.06
CLVS1-202ENST00000518426 EVX2Q03828 476 aa8.46□□□□□ -1.06
CLVS1-202ENST00000518426 ZBTB12Q9Y330 459 aaPredicted RBP8.44□□□□□ -1.06
CLVS1-202ENST00000518426 OSCARQ8IYS5 282 aa8.4□□□□□ -1.06
CLVS1-202ENST00000518426 LHX8Q68G74 356 aa8.37□□□□□ -1.07
CLVS1-202ENST00000518426 PLSCR2Q9NRY7 297 aa8.31□□□□□ -1.08
CLVS1-202ENST00000518426 GABBR2O75899 941 aa8.26□□□□□ -1.09
CLVS1-202ENST00000518426 C19orf67A6NJJ6 358 aa8.25□□□□□ -1.09
CLVS1-202ENST00000518426 PRKAR2AP13861 404 aaKnown RBP8.25□□□□□ -1.09
CLVS1-202ENST00000518426 SPDYE4A6NLX3 237 aa8.19□□□□□ -1.1
CLVS1-202ENST00000518426 FBXO3Q9UK99 471 aa8.17□□□□□ -1.1
CLVS1-202ENST00000518426 CLEC11AQ9Y240 323 aa8.17□□□□□ -1.1
CLVS1-202ENST00000518426 MKRN4PQ13434 485 aaPredicted RBP8.14□□□□□ -1.11
CLVS1-202ENST00000518426 SPDYE2BA6NHP3 402 aa8.13□□□□□ -1.11
CLVS1-202ENST00000518426 SPDYE6P0CI01 402 aa8.13□□□□□ -1.11
CLVS1-202ENST00000518426 SPDYE2Q495Y8 402 aa8.13□□□□□ -1.11
CLVS1-202ENST00000518426 SPDYE1Q8NFV5 336 aaPredicted RBP8.13□□□□□ -1.11
CLVS1-202ENST00000518426 FBLN2P98095 1184 aa8.11□□□□□ -1.11
CLVS1-202ENST00000518426 VASPP50552 380 aaPredicted RBP8.07□□□□□ -1.12
CLVS1-202ENST00000518426 POTEIP0CG38 1075 aa8.06□□□□□ -1.12
CLVS1-202ENST00000518426 PROM2Q8N271 834 aa8.06□□□□□ -1.12
CLVS1-202ENST00000518426 CHADLQ6NUI6 762 aa8.05□□□□□ -1.12
CLVS1-202ENST00000518426 DCAF8L2P0C7V8 631 aa8□□□□□ -1.13
CLVS1-202ENST00000518426 IFNLR1Q8IU57 520 aaPredicted RBP8□□□□□ -1.13
CLVS1-202ENST00000518426 PLCB2Q00722 1185 aa7.98□□□□□ -1.13
CLVS1-202ENST00000518426 CD44P16070 742 aaKnown RBP7.96□□□□□ -1.14
CLVS1-202ENST00000518426 ZNF692Q9BU19 519 aaPredicted RBP7.96□□□□□ -1.14
CLVS1-202ENST00000518426 PRR29P0C7W0 189 aa7.95□□□□□ -1.14
CLVS1-202ENST00000518426 CLCN6P51797 869 aa7.95□□□□□ -1.14
CLVS1-202ENST00000518426 DCBLD2Q96PD2 775 aa7.95□□□□□ -1.14
CLVS1-202ENST00000518426 SSUH2Q9Y2M2 353 aa7.95□□□□□ -1.14
CLVS1-202ENST00000518426 HAP1P54257 671 aaPredicted RBP7.92□□□□□ -1.14
CLVS1-202ENST00000518426 POTEMA6NI47 508 aa7.91□□□□□ -1.14
CLVS1-202ENST00000518426 PKD2Q13563 968 aa7.9□□□□□ -1.14
CLVS1-202ENST00000518426 POTEGQ6S5H5 508 aa7.87□□□□□ -1.15
CLVS1-202ENST00000518426 OTUD5Q96G74 571 aa7.87□□□□□ -1.15
CLVS1-202ENST00000518426 FARP1Q9Y4F1 1045 aaPredicted RBP7.87□□□□□ -1.15
CLVS1-202ENST00000518426 KLHL34Q8N239 644 aa7.86□□□□□ -1.15
CLVS1-202ENST00000518426 SPOCK2Q92563 424 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms