RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 ALKAL2Q6UX46 152 aa-0.51□□□□□ -2.49
HMGCS1-207ENST00000514610 TRGV9Q99603 122 aa-0.51□□□□□ -2.49
HMGCS1-207ENST00000514610 KIAA1551Q9HCM1 1747 aa-0.52□□□□□ -2.49
HMGCS1-207ENST00000514610 RAPGEF2Q9Y4G8 1499 aa-0.52□□□□□ -2.49
HMGCS1-207ENST00000514610 SPRR2EP22531 72 aa-0.52□□□□□ -2.49
HMGCS1-207ENST00000514610 GNGT1P63211 74 aa-0.52□□□□□ -2.49
HMGCS1-207ENST00000514610 KRTAP6-2Q3LI66 62 aa-0.52□□□□□ -2.49
HMGCS1-207ENST00000514610 MRPL34Q9BQ48 92 aaKnown RBP-0.52□□□□□ -2.49
HMGCS1-207ENST00000514610 LAMA5O15230 3695 aa-0.52□□□□□ -2.49
HMGCS1-207ENST00000514610 DNAH6Q9C0G6 4158 aa-0.52□□□□□ -2.49
HMGCS1-207ENST00000514610 SPTBN4Q9H254 2564 aa-0.52□□□□□ -2.49
HMGCS1-207ENST00000514610 TARBP1Q13395 1621 aaKnown RBP-0.53□□□□□ -2.49
HMGCS1-207ENST00000514610 CLIP1P30622 1438 aa-0.53□□□□□ -2.49
HMGCS1-207ENST00000514610 RNF213Q63HN8 5207 aa-0.53□□□□□ -2.49
HMGCS1-207ENST00000514610 TMEM218A2RU14 115 aa-0.53□□□□□ -2.49
HMGCS1-207ENST00000514610 ATOX1O00244 68 aa-0.53□□□□□ -2.49
HMGCS1-207ENST00000514610 GNGT2O14610 69 aa-0.53□□□□□ -2.49
HMGCS1-207ENST00000514610 UQCRHP07919 91 aa-0.53□□□□□ -2.49
HMGCS1-207ENST00000514610 S100PP25815 95 aa-0.53□□□□□ -2.49
HMGCS1-207ENST00000514610 KRTAP19-8Q3LI54 63 aa-0.53□□□□□ -2.49
HMGCS1-207ENST00000514610 DEFB107AQ8IZN7 70 aa-0.53□□□□□ -2.49
HMGCS1-207ENST00000514610 SERP2Q8N6R1 65 aa-0.53□□□□□ -2.49
HMGCS1-207ENST00000514610 NF1P21359 2839 aa-0.53□□□□□ -2.49
HMGCS1-207ENST00000514610 SAMD9Q5K651 1589 aa-0.53□□□□□ -2.49
HMGCS1-207ENST00000514610 SETD2Q9BYW2 2564 aaPredicted RBP-0.53□□□□□ -2.5
HMGCS1-207ENST00000514610 TGP01266 2768 aa-0.54□□□□□ -2.5
HMGCS1-207ENST00000514610 MON2Q7Z3U7 1717 aa-0.54□□□□□ -2.5
HMGCS1-207ENST00000514610 TCEAL7Q9BRU2 100 aa-0.54□□□□□ -2.5
HMGCS1-207ENST00000514610 AP4S1Q9Y587 144 aa-0.54□□□□□ -2.5
HMGCS1-207ENST00000514610 SHPRHQ149N8 1683 aa-0.54□□□□□ -2.5
HMGCS1-207ENST00000514610 USH2AO75445 5202 aa-0.54□□□□□ -2.5
HMGCS1-207ENST00000514610 SVEP1Q4LDE5 3571 aa-0.54□□□□□ -2.5
HMGCS1-207ENST00000514610 TEX14Q8IWB6 1497 aa-0.54□□□□□ -2.5
HMGCS1-207ENST00000514610 COL14A1Q05707 1796 aaKnown RBP-0.55□□□□□ -2.5
HMGCS1-207ENST00000514610 FAT3Q8TDW7 4589 aa-0.55□□□□□ -2.5
HMGCS1-207ENST00000514610 TRBV7-7A0A0K0K1E9 115 aa-0.55□□□□□ -2.5
HMGCS1-207ENST00000514610 LINC00032P0C843 101 aa-0.55□□□□□ -2.5
HMGCS1-207ENST00000514610 CDKN2A-AS1Q9UH64 79 aa-0.55□□□□□ -2.5
HMGCS1-207ENST00000514610 CREBBPQ92793 2442 aa-0.55□□□□□ -2.5
HMGCS1-207ENST00000514610 FYCO1Q9BQS8 1478 aa-0.55□□□□□ -2.5
HMGCS1-207ENST00000514610 UBR4Q5T4S7 5183 aa-0.55□□□□□ -2.5
HMGCS1-207ENST00000514610 ANKRD36BQ8N2N9 1353 aa-0.56□□□□□ -2.5
HMGCS1-207ENST00000514610 PTPN23Q9H3S7 1636 aa-0.56□□□□□ -2.5
HMGCS1-207ENST00000514610 SPTY2D1-AS1A0A0U1RR47 76 aa-0.56□□□□□ -2.5
HMGCS1-207ENST00000514610 ASIPP42127 132 aa-0.56□□□□□ -2.5
HMGCS1-207ENST00000514610 KRTAP20-2Q3LI61 65 aa-0.56□□□□□ -2.5
HMGCS1-207ENST00000514610 C14orf144Q96I85 54 aa-0.56□□□□□ -2.5
HMGCS1-207ENST00000514610 PMCHL2Q9BQD1 86 aa-0.56□□□□□ -2.5
HMGCS1-207ENST00000514610 HIGD1BQ9P298 99 aa-0.56□□□□□ -2.5
HMGCS1-207ENST00000514610 EPRSP07814 1512 aaKnown RBP-0.56□□□□□ -2.5
HMGCS1-207ENST00000514610 CUX1P39880 1505 aa-0.56□□□□□ -2.5
HMGCS1-207ENST00000514610 DNAH9Q9NYC9 4486 aa-0.57□□□□□ -2.5
HMGCS1-207ENST00000514610 MT-ATP8P03928 68 aa-0.57□□□□□ -2.5
HMGCS1-207ENST00000514610 DEFB112Q30KQ8 113 aa-0.57□□□□□ -2.5
HMGCS1-207ENST00000514610 ACBD7Q8N6N7 88 aa-0.57□□□□□ -2.5
HMGCS1-207ENST00000514610 NRXN1Q9ULB1 1477 aa-0.57□□□□□ -2.5
HMGCS1-207ENST00000514610 ADAMTS12P58397 1594 aa-0.57□□□□□ -2.5
HMGCS1-207ENST00000514610 ETDBQ3ZM63 59 aa-0.58□□□□□ -2.5
HMGCS1-207ENST00000514610 COX6B2Q6YFQ2 88 aa-0.58□□□□□ -2.5
HMGCS1-207ENST00000514610 ZNF720Q7Z2F6 126 aa-0.58□□□□□ -2.5
HMGCS1-207ENST00000514610 DPY30Q9C005 99 aa-0.58□□□□□ -2.5
HMGCS1-207ENST00000514610 PSENENQ9NZ42 101 aa-0.58□□□□□ -2.5
HMGCS1-207ENST00000514610 RYR1P21817 5038 aa-0.58□□□□□ -2.5
HMGCS1-207ENST00000514610 STARD9Q9P2P6 4700 aa-0.58□□□□□ -2.5
HMGCS1-207ENST00000514610 KIAA1109Q2LD37 5005 aa-0.58□□□□□ -2.5
HMGCS1-207ENST00000514610 MXRA5Q9NR99 2828 aa-0.59□□□□□ -2.5
HMGCS1-207ENST00000514610 NMSQ5H8A3 153 aa-0.59□□□□□ -2.5
HMGCS1-207ENST00000514610 UBE2D4Q9Y2X8 147 aa-0.59□□□□□ -2.5
HMGCS1-207ENST00000514610 REV3LO60673 3130 aa-0.59□□□□□ -2.5
HMGCS1-207ENST00000514610 RYR2Q92736 4967 aa-0.59□□□□□ -2.5
HMGCS1-207ENST00000514610 EPPK1P58107 5090 aaKnown RBP-0.59□□□□□ -2.5
HMGCS1-207ENST00000514610 C5P01031 1676 aa-0.59□□□□□ -2.5
HMGCS1-207ENST00000514610 KIF20BQ96Q89 1820 aa-0.59□□□□□ -2.5
HMGCS1-207ENST00000514610 FANCAO15360 1455 aa-0.6□□□□□ -2.5
HMGCS1-207ENST00000514610 UQCRHLA0A096LP55 91 aa-0.6□□□□□ -2.51
HMGCS1-207ENST00000514610 D6R8Y8 96 aa-0.6□□□□□ -2.51
HMGCS1-207ENST00000514610 IGLC2P0DOY2 106 aa-0.6□□□□□ -2.51
HMGCS1-207ENST00000514610 IGLC3P0DOY3 106 aa-0.6□□□□□ -2.51
HMGCS1-207ENST00000514610 RBP2P50120 134 aa-0.6□□□□□ -2.51
HMGCS1-207ENST00000514610 S100A10P60903 97 aa-0.6□□□□□ -2.51
HMGCS1-207ENST00000514610 HEPN1Q6WQI6 88 aa-0.6□□□□□ -2.51
HMGCS1-207ENST00000514610 WFDC13Q8IUB5 93 aa-0.6□□□□□ -2.51
HMGCS1-207ENST00000514610 MUSTN1Q8IVN3 82 aa-0.6□□□□□ -2.51
HMGCS1-207ENST00000514610 MAGI2Q86UL8 1455 aa-0.61□□□□□ -2.51
HMGCS1-207ENST00000514610 PEG3Q9GZU2 1588 aa-0.61□□□□□ -2.51
HMGCS1-207ENST00000514610 CNTLNQ9NXG0 1405 aa-0.61□□□□□ -2.51
HMGCS1-207ENST00000514610 HYDINQ4G0P3 5121 aa-0.61□□□□□ -2.51
HMGCS1-207ENST00000514610 LEPROTL1O95214 131 aa-0.61□□□□□ -2.51
HMGCS1-207ENST00000514610 MT4P47944 62 aa-0.61□□□□□ -2.51
HMGCS1-207ENST00000514610 CICQ96RK0 1608 aaPredicted RBP-0.61□□□□□ -2.51
HMGCS1-207ENST00000514610 F8WEM9 126 aa-0.62□□□□□ -2.51
HMGCS1-207ENST00000514610 H0YGG7 62 aa-0.62□□□□□ -2.51
HMGCS1-207ENST00000514610 COL5A1-AS1Q5SY13 56 aa-0.62□□□□□ -2.51
HMGCS1-207ENST00000514610 LELP1Q5T871 98 aa-0.62□□□□□ -2.51
HMGCS1-207ENST00000514610 HERC2O95714 4834 aa-0.62□□□□□ -2.51
HMGCS1-207ENST00000514610 AKAP13Q12802 2813 aa-0.62□□□□□ -2.51
HMGCS1-207ENST00000514610 MUC17Q685J3 4493 aa-0.62□□□□□ -2.51
HMGCS1-207ENST00000514610 TRANK1O15050 2925 aa-0.63□□□□□ -2.51
HMGCS1-207ENST00000514610 MT1AP04731 61 aa-0.63□□□□□ -2.51
HMGCS1-207ENST00000514610 NBPF19A0A087WUL8 3843 aa-0.64□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms