RNA–Protein interactions for RNA: ENST00000465213.1

VPS8-217, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 656 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-217ENST00000465213 ABCA4P78363 2273 aa2.19□□□□□ -2.06
VPS8-217ENST00000465213 TRBV6-5A0A0K0K1A5 114 aa2.19□□□□□ -2.06
VPS8-217ENST00000465213 D6R8Y8 96 aa2.19□□□□□ -2.06
VPS8-217ENST00000465213 IGLV3-19P01714 112 aa2.19□□□□□ -2.06
VPS8-217ENST00000465213 COA5Q86WW8 74 aa2.19□□□□□ -2.06
VPS8-217ENST00000465213 BAGE3Q86Y29 109 aa2.19□□□□□ -2.06
VPS8-217ENST00000465213 BAGE2Q86Y30 109 aa2.19□□□□□ -2.06
VPS8-217ENST00000465213 MUSTN1Q8IVN3 82 aa2.19□□□□□ -2.06
VPS8-217ENST00000465213 LINC00846Q9NV44 126 aa2.19□□□□□ -2.06
VPS8-217ENST00000465213 UBE2D4Q9Y2X8 147 aa2.19□□□□□ -2.06
VPS8-217ENST00000465213 BOD1L1Q8NFC6 3051 aa2.19□□□□□ -2.06
VPS8-217ENST00000465213 ABCA5Q8WWZ7 1642 aa2.19□□□□□ -2.06
VPS8-217ENST00000465213 ITSN1Q15811 1721 aa2.19□□□□□ -2.06
VPS8-217ENST00000465213 ALPK2Q86TB3 2170 aa2.19□□□□□ -2.06
VPS8-217ENST00000465213 KIAA1109Q2LD37 5005 aa2.18□□□□□ -2.06
VPS8-217ENST00000465213 PDCD11Q14690 1871 aaKnown RBP2.18□□□□□ -2.06
VPS8-217ENST00000465213 RYR1P21817 5038 aa2.18□□□□□ -2.06
VPS8-217ENST00000465213 ABCA6Q8N139 1617 aa2.18□□□□□ -2.06
VPS8-217ENST00000465213 SHANK1Q9Y566 2161 aa2.18□□□□□ -2.06
VPS8-217ENST00000465213 IL9P15248 144 aa2.18□□□□□ -2.06
VPS8-217ENST00000465213 IFI27P40305 119 aaPredicted RBP2.18□□□□□ -2.06
VPS8-217ENST00000465213 C5orf56Q8N8D9 126 aa2.18□□□□□ -2.06
VPS8-217ENST00000465213 WFDC6Q9BQY6 131 aa2.18□□□□□ -2.06
VPS8-217ENST00000465213 PRR15LQ9BU68 103 aa2.18□□□□□ -2.06
VPS8-217ENST00000465213 LAMA4Q16363 1823 aa2.18□□□□□ -2.06
VPS8-217ENST00000465213 SPTBP11277 2137 aa2.18□□□□□ -2.06
VPS8-217ENST00000465213 RYR3Q15413 4870 aa2.17□□□□□ -2.06
VPS8-217ENST00000465213 VPS13AQ96RL7 3174 aa2.17□□□□□ -2.06
VPS8-217ENST00000465213 A0A087WTM6 91 aa2.17□□□□□ -2.06
VPS8-217ENST00000465213 IGKV2-29A2NJV5 120 aaPredicted RBP2.17□□□□□ -2.06
VPS8-217ENST00000465213 M0R135 149 aa2.17□□□□□ -2.06
VPS8-217ENST00000465213 MGPP08493 103 aa2.17□□□□□ -2.06
VPS8-217ENST00000465213 CD163L1Q9NR16 1453 aa2.17□□□□□ -2.06
VPS8-217ENST00000465213 GBF1Q92538 1859 aa2.17□□□□□ -2.06
VPS8-217ENST00000465213 CACNA1HO95180 2353 aa2.17□□□□□ -2.06
VPS8-217ENST00000465213 DMXL1Q9Y485 3027 aa2.17□□□□□ -2.06
VPS8-217ENST00000465213 IGF2RP11717 2491 aa2.16□□□□□ -2.06
VPS8-217ENST00000465213 SHROOM3Q8TF72 1996 aa2.16□□□□□ -2.06
VPS8-217ENST00000465213 COX17Q14061 63 aa2.16□□□□□ -2.06
VPS8-217ENST00000465213 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
VPS8-217ENST00000465213 ZNF625Q96I27 306 aaPredicted RBP2.16□□□□□ -2.06
VPS8-217ENST00000465213 SNURFQ9Y675 71 aa2.16□□□□□ -2.06
VPS8-217ENST00000465213 PHRF1Q9P1Y6 1649 aaKnown RBP2.16□□□□□ -2.06
VPS8-217ENST00000465213 ATP7BP35670 1465 aa2.15□□□□□ -2.06
VPS8-217ENST00000465213 CTXND1A0A1B0GTU2 59 aa2.15□□□□□ -2.07
VPS8-217ENST00000465213 C3orf79P0CE67 100 aa2.15□□□□□ -2.07
VPS8-217ENST00000465213 ZNF137PP52743 207 aa2.15□□□□□ -2.07
VPS8-217ENST00000465213 FXYD4P59646 89 aa2.15□□□□□ -2.07
VPS8-217ENST00000465213 SMIM4Q8WVI0 70 aa2.15□□□□□ -2.07
VPS8-217ENST00000465213 NBEAQ8NFP9 2946 aa2.15□□□□□ -2.07
VPS8-217ENST00000465213 TENM1Q9UKZ4 2725 aa2.15□□□□□ -2.07
VPS8-217ENST00000465213 SCN7AQ01118 1682 aa2.15□□□□□ -2.07
VPS8-217ENST00000465213 KIF1AQ12756 1690 aa2.15□□□□□ -2.07
VPS8-217ENST00000465213 MDC1Q14676 2089 aaKnown RBP2.14□□□□□ -2.07
VPS8-217ENST00000465213 LOC400499M0QZD8 3231 aa2.14□□□□□ -2.07
VPS8-217ENST00000465213 PAPPAQ13219 1627 aa2.14□□□□□ -2.07
VPS8-217ENST00000465213 SIPA1L3O60292 1781 aaPredicted RBP2.14□□□□□ -2.07
VPS8-217ENST00000465213 TRBV7-4A0A0J9YYF1 115 aa2.14□□□□□ -2.07
VPS8-217ENST00000465213 GDF5OSQ5U4N7 250 aa2.14□□□□□ -2.07
VPS8-217ENST00000465213 SPRR4Q96PI1 79 aa2.14□□□□□ -2.07
VPS8-217ENST00000465213 PROK2Q9HC23 129 aa2.14□□□□□ -2.07
VPS8-217ENST00000465213 PLAC8Q9NZF1 115 aa2.14□□□□□ -2.07
VPS8-217ENST00000465213 ARFGEF1Q9Y6D6 1849 aa2.14□□□□□ -2.07
VPS8-217ENST00000465213 LOC285556D6RIA3 1793 aa2.13□□□□□ -2.07
VPS8-217ENST00000465213 SPINT3P49223 89 aa2.13□□□□□ -2.07
VPS8-217ENST00000465213 Q6ZRN7 208 aaPredicted RBP2.13□□□□□ -2.07
VPS8-217ENST00000465213 LINC00304Q8N9R0 145 aa2.13□□□□□ -2.07
VPS8-217ENST00000465213 LINC00208Q96KT6 92 aa2.13□□□□□ -2.07
VPS8-217ENST00000465213 USP9YO00507 2555 aaPredicted RBP2.13□□□□□ -2.07
VPS8-217ENST00000465213 CDC42BPGQ6DT37 1551 aa2.13□□□□□ -2.07
VPS8-217ENST00000465213 FMN2Q9NZ56 1722 aa2.13□□□□□ -2.07
VPS8-217ENST00000465213 PLCH1Q4KWH8 1693 aa2.12□□□□□ -2.07
VPS8-217ENST00000465213 DOCK10Q96BY6 2186 aa2.12□□□□□ -2.07
VPS8-217ENST00000465213 XRN1Q8IZH2 1706 aaKnown RBP2.12□□□□□ -2.07
VPS8-217ENST00000465213 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.12□□□□□ -2.07
VPS8-217ENST00000465213 A0A087WVE0 104 aa2.12□□□□□ -2.07
VPS8-217ENST00000465213 J3QKU1 62 aa2.12□□□□□ -2.07
VPS8-217ENST00000465213 HILPDAQ9Y5L2 63 aa2.12□□□□□ -2.07
VPS8-217ENST00000465213 MYO7BQ6PIF6 2116 aa2.12□□□□□ -2.07
VPS8-217ENST00000465213 TET1Q8NFU7 2136 aa2.12□□□□□ -2.07
VPS8-217ENST00000465213 MAP2P11137 1827 aaKnown RBP2.12□□□□□ -2.07
VPS8-217ENST00000465213 TNRC6BQ9UPQ9 1833 aaKnown RBP2.12□□□□□ -2.07
VPS8-217ENST00000465213 FREM1Q5H8C1 2179 aa2.12□□□□□ -2.07
VPS8-217ENST00000465213 PAPPA2Q9BXP8 1791 aa2.11□□□□□ -2.07
VPS8-217ENST00000465213 PIK3C2BO00750 1634 aa2.11□□□□□ -2.07
VPS8-217ENST00000465213 TRIOO75962 3097 aa2.11□□□□□ -2.07
VPS8-217ENST00000465213 COL12A1Q99715 3063 aa2.11□□□□□ -2.07
VPS8-217ENST00000465213 A0A1B0GUT8 65 aa2.11□□□□□ -2.07
VPS8-217ENST00000465213 M0R3E3 92 aa2.11□□□□□ -2.07
VPS8-217ENST00000465213 CAV3P56539 151 aa2.11□□□□□ -2.07
VPS8-217ENST00000465213 HYDINQ4G0P3 5121 aa2.11□□□□□ -2.07
VPS8-217ENST00000465213 SYCP2Q9BX26 1530 aa2.11□□□□□ -2.07
VPS8-217ENST00000465213 DSPP15924 2871 aaKnown RBP2.11□□□□□ -2.07
VPS8-217ENST00000465213 PDZD2O15018 2839 aa2.1□□□□□ -2.07
VPS8-217ENST00000465213 ANKRD50Q9ULJ7 1429 aa2.1□□□□□ -2.07
VPS8-217ENST00000465213 CSMD1Q96PZ7 3565 aa2.1□□□□□ -2.07
VPS8-217ENST00000465213 A0A0D9SFI3 127 aa2.1□□□□□ -2.07
VPS8-217ENST00000465213 HCRTO43612 131 aa2.1□□□□□ -2.07
VPS8-217ENST00000465213 NDUFB1O75438 58 aa2.1□□□□□ -2.07
VPS8-217ENST00000465213 ATXN8Q156A1 80 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms