RNA–Protein interactions for RNA: ENST00000435142.1

USP9YP28-201, Transcript of USP9Y pseudogene 28, humanhuman

BASIC

Gene USP9YP28, Length 589 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9YP28-201ENST00000435142 HEPN1Q6WQI6 88 aa-0.72□□□□□ -2.52
USP9YP28-201ENST00000435142 CDKN2A-AS1Q9UH64 79 aa-0.72□□□□□ -2.52
USP9YP28-201ENST00000435142 PDCD11Q14690 1871 aaKnown RBP-0.72□□□□□ -2.52
USP9YP28-201ENST00000435142 UBR4Q5T4S7 5183 aa-0.72□□□□□ -2.53
USP9YP28-201ENST00000435142 CLIP1P30622 1438 aa-0.72□□□□□ -2.53
USP9YP28-201ENST00000435142 MLH3Q9UHC1 1453 aa-0.73□□□□□ -2.53
USP9YP28-201ENST00000435142 TRAV30A0A087WSZ9 112 aa-0.73□□□□□ -2.53
USP9YP28-201ENST00000435142 TRBV7-7A0A0K0K1E9 115 aa-0.73□□□□□ -2.53
USP9YP28-201ENST00000435142 SPTY2D1-AS1A0A0U1RR47 76 aa-0.73□□□□□ -2.53
USP9YP28-201ENST00000435142 UQCRHP07919 91 aa-0.73□□□□□ -2.53
USP9YP28-201ENST00000435142 HIGD1BQ9P298 99 aa-0.73□□□□□ -2.53
USP9YP28-201ENST00000435142 SONP18583 2426 aaKnown RBP-0.73□□□□□ -2.53
USP9YP28-201ENST00000435142 KNL1Q8NG31 2342 aa-0.73□□□□□ -2.53
USP9YP28-201ENST00000435142 LRRC37AA6NMS7 1700 aa-0.74□□□□□ -2.53
USP9YP28-201ENST00000435142 HERC2O95714 4834 aa-0.74□□□□□ -2.53
USP9YP28-201ENST00000435142 HMGN3Q15651 99 aa-0.74□□□□□ -2.53
USP9YP28-201ENST00000435142 KRTAP20-2Q3LI61 65 aa-0.74□□□□□ -2.53
USP9YP28-201ENST00000435142 LELP1Q5T871 98 aa-0.74□□□□□ -2.53
USP9YP28-201ENST00000435142 ALKAL2Q6UX46 152 aa-0.74□□□□□ -2.53
USP9YP28-201ENST00000435142 FAT3Q8TDW7 4589 aa-0.74□□□□□ -2.53
USP9YP28-201ENST00000435142 USH2AO75445 5202 aa-0.74□□□□□ -2.53
USP9YP28-201ENST00000435142 NCOA3Q9Y6Q9 1424 aa-0.74□□□□□ -2.53
USP9YP28-201ENST00000435142 PRDM15P57071 1507 aaPredicted RBP-0.74□□□□□ -2.53
USP9YP28-201ENST00000435142 FAM135AQ9P2D6 1515 aa-0.74□□□□□ -2.53
USP9YP28-201ENST00000435142 CC2D2AQ9P2K1 1620 aa-0.75□□□□□ -2.53
USP9YP28-201ENST00000435142 NBASA2RRP1 2371 aa-0.75□□□□□ -2.53
USP9YP28-201ENST00000435142 DNAH9Q9NYC9 4486 aa-0.75□□□□□ -2.53
USP9YP28-201ENST00000435142 SPTBN4Q9H254 2564 aa-0.75□□□□□ -2.53
USP9YP28-201ENST00000435142 WFDC13Q8IUB5 93 aa-0.75□□□□□ -2.53
USP9YP28-201ENST00000435142 SERP2Q8N6R1 65 aa-0.75□□□□□ -2.53
USP9YP28-201ENST00000435142 EPG5Q9HCE0 2579 aa-0.75□□□□□ -2.53
USP9YP28-201ENST00000435142 KNDC1Q76NI1 1749 aa-0.75□□□□□ -2.53
USP9YP28-201ENST00000435142 TACC2O95359 2948 aa-0.75□□□□□ -2.53
USP9YP28-201ENST00000435142 LYSTQ99698 3801 aa-0.76□□□□□ -2.53
USP9YP28-201ENST00000435142 SPG11Q96JI7 2443 aa-0.76□□□□□ -2.53
USP9YP28-201ENST00000435142 AKAP13Q12802 2813 aa-0.76□□□□□ -2.53
USP9YP28-201ENST00000435142 PRRC2CQ9Y520 2896 aaKnown RBP-0.76□□□□□ -2.53
USP9YP28-201ENST00000435142 TMEM218A2RU14 115 aa-0.76□□□□□ -2.53
USP9YP28-201ENST00000435142 ATOX1O00244 68 aa-0.76□□□□□ -2.53
USP9YP28-201ENST00000435142 MT-ATP8P03928 68 aa-0.76□□□□□ -2.53
USP9YP28-201ENST00000435142 PMCHL2Q9BQD1 86 aa-0.76□□□□□ -2.53
USP9YP28-201ENST00000435142 AP4S1Q9Y587 144 aa-0.76□□□□□ -2.53
USP9YP28-201ENST00000435142 RAPGEF2Q9Y4G8 1499 aa-0.76□□□□□ -2.53
USP9YP28-201ENST00000435142 TARBP1Q13395 1621 aaKnown RBP-0.76□□□□□ -2.53
USP9YP28-201ENST00000435142 TRANK1O15050 2925 aa-0.76□□□□□ -2.53
USP9YP28-201ENST00000435142 AKAP9Q99996 3911 aa-0.76□□□□□ -2.53
USP9YP28-201ENST00000435142 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.77□□□□□ -2.53
USP9YP28-201ENST00000435142 CHD1O14646 1710 aa-0.77□□□□□ -2.53
USP9YP28-201ENST00000435142 TOPAZ1Q8N9V7 1692 aa-0.77□□□□□ -2.53
USP9YP28-201ENST00000435142 SAMD9Q5K651 1589 aa-0.77□□□□□ -2.53
USP9YP28-201ENST00000435142 ZFYVE16Q7Z3T8 1539 aa-0.77□□□□□ -2.53
USP9YP28-201ENST00000435142 ABCC2Q92887 1545 aa-0.77□□□□□ -2.53
USP9YP28-201ENST00000435142 H0YGG7 62 aa-0.77□□□□□ -2.53
USP9YP28-201ENST00000435142 MT4P47944 62 aa-0.77□□□□□ -2.53
USP9YP28-201ENST00000435142 PSENENQ9NZ42 101 aa-0.77□□□□□ -2.53
USP9YP28-201ENST00000435142 VPS13DQ5THJ4 4388 aa-0.77□□□□□ -2.53
USP9YP28-201ENST00000435142 PTPN23Q9H3S7 1636 aa-0.78□□□□□ -2.53
USP9YP28-201ENST00000435142 ANKRD36BQ8N2N9 1353 aa-0.78□□□□□ -2.53
USP9YP28-201ENST00000435142 D6R8Y8 96 aa-0.78□□□□□ -2.53
USP9YP28-201ENST00000435142 IGLC2P0DOY2 106 aa-0.78□□□□□ -2.53
USP9YP28-201ENST00000435142 IGLC3P0DOY3 106 aa-0.78□□□□□ -2.53
USP9YP28-201ENST00000435142 S100PP25815 95 aa-0.78□□□□□ -2.53
USP9YP28-201ENST00000435142 MUSTN1Q8IVN3 82 aa-0.78□□□□□ -2.53
USP9YP28-201ENST00000435142 KIAA1551Q9HCM1 1747 aa-0.78□□□□□ -2.53
USP9YP28-201ENST00000435142 SHPRHQ149N8 1683 aa-0.78□□□□□ -2.53
USP9YP28-201ENST00000435142 ADAMTS12P58397 1594 aa-0.79□□□□□ -2.54
USP9YP28-201ENST00000435142 NRXN1Q9ULB1 1477 aa-0.79□□□□□ -2.54
USP9YP28-201ENST00000435142 LEPROTL1O95214 131 aa-0.79□□□□□ -2.54
USP9YP28-201ENST00000435142 LINC00032P0C843 101 aa-0.79□□□□□ -2.54
USP9YP28-201ENST00000435142 ETDBQ3ZM63 59 aa-0.79□□□□□ -2.54
USP9YP28-201ENST00000435142 NMSQ5H8A3 153 aa-0.79□□□□□ -2.54
USP9YP28-201ENST00000435142 ZNF720Q7Z2F6 126 aa-0.79□□□□□ -2.54
USP9YP28-201ENST00000435142 HIVEP1P15822 2718 aa-0.79□□□□□ -2.54
USP9YP28-201ENST00000435142 HECTD1Q9ULT8 2610 aa-0.79□□□□□ -2.54
USP9YP28-201ENST00000435142 DNAH3Q8TD57 4116 aa-0.79□□□□□ -2.54
USP9YP28-201ENST00000435142 ANKRD36A6QL64 1941 aa-0.79□□□□□ -2.54
USP9YP28-201ENST00000435142 HTTP42858 3142 aa-0.8□□□□□ -2.54
USP9YP28-201ENST00000435142 S100A10P60903 97 aa-0.8□□□□□ -2.54
USP9YP28-201ENST00000435142 COL5A1-AS1Q5SY13 56 aa-0.8□□□□□ -2.54
USP9YP28-201ENST00000435142 C14orf144Q96I85 54 aa-0.8□□□□□ -2.54
USP9YP28-201ENST00000435142 CUX1P39880 1505 aa-0.8□□□□□ -2.54
USP9YP28-201ENST00000435142 ABCA3Q99758 1704 aa-0.81□□□□□ -2.54
USP9YP28-201ENST00000435142 TNRC18O15417 2968 aaPredicted RBP-0.81□□□□□ -2.54
USP9YP28-201ENST00000435142 UQCRHLA0A096LP55 91 aa-0.81□□□□□ -2.54
USP9YP28-201ENST00000435142 F8WEM9 126 aa-0.81□□□□□ -2.54
USP9YP28-201ENST00000435142 MT1AP04731 61 aa-0.81□□□□□ -2.54
USP9YP28-201ENST00000435142 COX6B2Q6YFQ2 88 aa-0.81□□□□□ -2.54
USP9YP28-201ENST00000435142 SPRR2FQ96RM1 72 aa-0.81□□□□□ -2.54
USP9YP28-201ENST00000435142 DPY30Q9C005 99 aa-0.81□□□□□ -2.54
USP9YP28-201ENST00000435142 PDE4DIPQ5VU43 2346 aa-0.81□□□□□ -2.54
USP9YP28-201ENST00000435142 MUC17Q685J3 4493 aa-0.81□□□□□ -2.54
USP9YP28-201ENST00000435142 CUBNO60494 3623 aa-0.82□□□□□ -2.54
USP9YP28-201ENST00000435142 CICQ96RK0 1608 aaPredicted RBP-0.82□□□□□ -2.54
USP9YP28-201ENST00000435142 FAUP35544 74 aaKnown RBP-0.82□□□□□ -2.54
USP9YP28-201ENST00000435142 TCEAL7Q9BRU2 100 aa-0.82□□□□□ -2.54
USP9YP28-201ENST00000435142 EPPK1P58107 5090 aaKnown RBP-0.82□□□□□ -2.54
USP9YP28-201ENST00000435142 MAGI2Q86UL8 1455 aa-0.83□□□□□ -2.54
USP9YP28-201ENST00000435142 TEX14Q8IWB6 1497 aa-0.83□□□□□ -2.54
USP9YP28-201ENST00000435142 PKHD1L1Q86WI1 4243 aa-0.83□□□□□ -2.54
USP9YP28-201ENST00000435142 UBE2D4Q9Y2X8 147 aa-0.83□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms