RNA–Protein interactions for RNA: ENSMUST00000192557.1

Pcdh20-202, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 3,362 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-202ENSMUST00000192557 Scnm1Q8K136 229 aa8.45□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Olfr1009Q8VFK1 314 aa8.45□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Ankrd17Q99NH0 2603 aaKnown RBP8.45□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 H2al1jA2BFR3 109 aa8.44□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Pfn1P62962 140 aa8.44□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Bst1Q64277 311 aa8.44□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Srsf1Q6PDM2 248 aaKnown RBP8.44□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Olfr1243Q8VGM7 305 aa8.44□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Rab4bQ91ZR1 213 aa8.44□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Cldn16Q925N4 235 aa8.44□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 TirapQ99JY1 241 aa8.44□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 C2cd3Q52KB6 2323 aa8.44□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Trbv3A0A0A6YYE2 117 aa8.44□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Gm10020E9QAZ2 204 aa8.44□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Gm21060J3KMU4 56 aa8.44□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 P04944 107 aa8.44□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 SeleQ00690 612 aa8.44□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Nanos1Q80WY3 267 aa8.44□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Pitpnc1Q8K4R4 332 aa8.44□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Rpl15Q9CZM2 204 aaKnown RBP8.44□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Tmem52Q9D702 196 aa8.44□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Susd2Q9DBX3 820 aa8.44□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 V1ra8Q9EQ48 279 aa8.44□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Olfr1369-ps1A0A140T8K7 317 aa8.44□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Psg18B2RSG7 476 aa8.44□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Twist1P26687 206 aa8.44□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Ube2g1P62254 170 aa8.44□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Zfand3Q497H0 227 aa8.44□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Olfr1336Q8VGH5 314 aa8.44□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Higd1bQ99JY6 98 aa8.44□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Rnf2Q9CQJ4 336 aa8.44□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Lyg1Q9D7Q0 197 aa8.44□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 CklfQ9DAS1 152 aa8.44□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Olfr1320A2AHM8 319 aa8.43□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 RhogP84096 191 aa8.43□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Slc17a2Q5SZA1 478 aa8.43□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Olfr148Q60887 310 aa8.43□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Pf4Q9Z126 105 aa8.43□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Rab4aP56371 218 aa8.43□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Nbl1Q61477 178 aa8.43□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Prss3Q792Z0 246 aaKnown RBP8.43□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Tm2d1Q99MB3 208 aa8.43□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 MNCb-2875Q9DCB3 74 aa8.43□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Epg5Q80TA9 2572 aa8.43□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 BC030500E9Q6W0 185 aa8.42□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Vmn1r70Q8R254 298 aa8.42□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Necap2Q9D1J1 266 aa8.42□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Q9D8L0 127 aa8.42□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Pla2g2dQ9WVF6 144 aa8.42□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Col7a1Q63870 2944 aa8.42□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Arid1bE9Q4N7 2244 aa8.42□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Ighv1-15A0A0A6YXA5 117 aa8.42□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Gm42420A0A0J9YUQ2 99 aa8.42□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 IgipA0A1B0GR74 53 aa8.42□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Gm44501A8R0T9 150 aa8.42□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Gm21900J3QP38 180 aa8.42□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 SvipQ3UZP4 77 aa8.42□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Hoxc12Q8K5B8 280 aa8.42□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 RfxapQ8VCG9 231 aa8.42□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Dppa2Q9CWH0 301 aa8.42□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Setd2E9Q5F9 2537 aa8.42□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Ighv5-16A0A0B4J1P4 117 aa8.42□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Zfp979A2A799 407 aa8.42□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Gm10203F6QJ09 66 aa8.42□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Smad7O35253 426 aa8.42□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Ascl2O35885 263 aa8.42□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 P01724 129 aa8.42□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Edn1P22387 202 aa8.42□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Trav15-1-dv6-1Q5R1D2 117 aa8.42□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Rab9aQ9R0M6 201 aa8.42□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Tmem29A2ANF5 204 aa8.41□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Ly6lH3BJG9 140 aa8.41□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Gm37988J3QM41 62 aa8.41□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Rplp1P47955 114 aa8.41□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 SnrpcQ62241 159 aa8.41□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Olfr715Q8VG49 315 aa8.41□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Gatad1Q920S3 266 aa8.41□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Mpv17lQ99MS3 194 aa8.41□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Cotl1Q9CQI6 142 aa8.41□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Crybb3Q9JJU9 211 aa8.41□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 ApomQ9Z1R3 190 aa8.41□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Zfp462B1AWL2 2495 aaKnown RBP8.41□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Gm14325A2AW67 498 aa8.41□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Gm15557A6PWY0 234 aa8.41□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 F7P70375 446 aa8.41□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Ccl21aP84444 133 aa8.41□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Ccl21bP86792 133 aa8.41□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Ccl21cP86793 133 aa8.41□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Olfr1475Q8VEV6 314 aa8.41□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Tmem210Q9D2F0 147 aa8.41□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Usp9yF8VPU6 2556 aa8.41□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Gm4565A0A140LJ87 301 aa8.41□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Gm6176J3QK59 301 aa8.41□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Timp3P39876 211 aa8.41□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Lrcol1Q3URS3 161 aa8.41□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Gm4567Q3UTA8 301 aa8.41□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 SelplgQ62170 397 aa8.41□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Ccl12Q62401 104 aa8.41□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 6030452D12RikQ8CD33 222 aa8.41□□□□□ -1.06
Pcdh20-202ENSMUST00000192557 Cxcr6Q9EQ16 351 aa8.41□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 36.5 ms