RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 OtogO55225 2910 aa12.45□□□□□ -0.42
Trim39-203ENSMUST00000113706 Spint3Q3UW09 88 aa12.45□□□□□ -0.42
Trim39-203ENSMUST00000113706 Tbx19Q99ME7 446 aa12.45□□□□□ -0.42
Trim39-203ENSMUST00000113706 Zfp114B2RRA8 586 aa12.45□□□□□ -0.42
Trim39-203ENSMUST00000113706 Rab24P35290 203 aa12.45□□□□□ -0.42
Trim39-203ENSMUST00000113706 6030452D12RikQ8CD33 222 aa12.45□□□□□ -0.42
Trim39-203ENSMUST00000113706 Spink12Q9D256 87 aa12.45□□□□□ -0.42
Trim39-203ENSMUST00000113706 Igsf23B2RTN2 239 aa12.44□□□□□ -0.42
Trim39-203ENSMUST00000113706 PigyP0C1P0 71 aa12.44□□□□□ -0.42
Trim39-203ENSMUST00000113706 MgpP19788 104 aa12.44□□□□□ -0.42
Trim39-203ENSMUST00000113706 Wipf2Q6PEV3 440 aa12.44□□□□□ -0.42
Trim39-203ENSMUST00000113706 MNCb-2875Q9DCB3 74 aa12.44□□□□□ -0.42
Trim39-203ENSMUST00000113706 Cldn1O88551 211 aa12.44□□□□□ -0.42
Trim39-203ENSMUST00000113706 IgipA0A1B0GR74 53 aa12.43□□□□□ -0.42
Trim39-203ENSMUST00000113706 Gm14325A2AW67 498 aa12.43□□□□□ -0.42
Trim39-203ENSMUST00000113706 Rnf212bD3Z423 297 aa12.43□□□□□ -0.42
Trim39-203ENSMUST00000113706 Olfr1116E9PXB8 307 aa12.43□□□□□ -0.42
Trim39-203ENSMUST00000113706 Gstp1P19157 210 aa12.43□□□□□ -0.42
Trim39-203ENSMUST00000113706 Gpm6bP35803 328 aa12.43□□□□□ -0.42
Trim39-203ENSMUST00000113706 Olfr148Q60887 310 aa12.43□□□□□ -0.42
Trim39-203ENSMUST00000113706 Sox21Q811W0 276 aa12.43□□□□□ -0.42
Trim39-203ENSMUST00000113706 Gm15293D3YX02 93 aa12.43□□□□□ -0.42
Trim39-203ENSMUST00000113706 P0C1Z5 52 aa12.43□□□□□ -0.42
Trim39-203ENSMUST00000113706 Twist1P26687 206 aa12.43□□□□□ -0.42
Trim39-203ENSMUST00000113706 Tac3P55099 116 aa12.43□□□□□ -0.42
Trim39-203ENSMUST00000113706 V1rd19Q3KNP5 305 aa12.43□□□□□ -0.42
Trim39-203ENSMUST00000113706 Bst1Q64277 311 aa12.43□□□□□ -0.42
Trim39-203ENSMUST00000113706 Prickle3Q80VL3 624 aa12.43□□□□□ -0.42
Trim39-203ENSMUST00000113706 Olfr984Q8VFN1 314 aa12.43□□□□□ -0.42
Trim39-203ENSMUST00000113706 Trappc2lQ9JME7 139 aa12.43□□□□□ -0.42
Trim39-203ENSMUST00000113706 Ighv5-16A0A0B4J1P4 117 aa12.43□□□□□ -0.42
Trim39-203ENSMUST00000113706 Prok1Q14A28 105 aa12.43□□□□□ -0.42
Trim39-203ENSMUST00000113706 MymxQ2Q5T5 84 aa12.43□□□□□ -0.42
Trim39-203ENSMUST00000113706 Rasl11aQ6IMB1 242 aa12.43□□□□□ -0.42
Trim39-203ENSMUST00000113706 Duxbl2Q7TNE6 350 aa12.43□□□□□ -0.42
Trim39-203ENSMUST00000113706 Olfr996Q7TRA0 314 aa12.43□□□□□ -0.42
Trim39-203ENSMUST00000113706 Armcx4E9PWM3 2356 aa12.42□□□□□ -0.42
Trim39-203ENSMUST00000113706 Olfr1436A0PK57 315 aa12.42□□□□□ -0.42
Trim39-203ENSMUST00000113706 Gm4133K9J7G6 307 aa12.42□□□□□ -0.42
Trim39-203ENSMUST00000113706 Myod1P10085 318 aa12.42□□□□□ -0.42
Trim39-203ENSMUST00000113706 Fabp6P51162 128 aa12.42□□□□□ -0.42
Trim39-203ENSMUST00000113706 Ccl21aP84444 133 aa12.42□□□□□ -0.42
Trim39-203ENSMUST00000113706 Ccl21bP86792 133 aa12.42□□□□□ -0.42
Trim39-203ENSMUST00000113706 Ccl21cP86793 133 aa12.42□□□□□ -0.42
Trim39-203ENSMUST00000113706 Znf329Q6GQR8 522 aa12.42□□□□□ -0.42
Trim39-203ENSMUST00000113706 Vamp5Q9Z2P8 102 aa12.42□□□□□ -0.42
Trim39-203ENSMUST00000113706 Prpf8Q99PV0 2335 aaKnown RBP12.42□□□□□ -0.42
Trim39-203ENSMUST00000113706 Slc25a5P51881 298 aaKnown RBP12.42□□□□□ -0.42
Trim39-203ENSMUST00000113706 Gm17334Q8C6U3 126 aa12.42□□□□□ -0.42
Trim39-203ENSMUST00000113706 Q9CX25 107 aa12.42□□□□□ -0.42
Trim39-203ENSMUST00000113706 Tnfrsf13cQ9D8D0 175 aa12.42□□□□□ -0.42
Trim39-203ENSMUST00000113706 Tmprss5Q9ER04 455 aa12.42□□□□□ -0.42
Trim39-203ENSMUST00000113706 Gm15557A6PWY0 234 aa12.41□□□□□ -0.42
Trim39-203ENSMUST00000113706 Foxi3E0CZH3 425 aa12.41□□□□□ -0.42
Trim39-203ENSMUST00000113706 Lgals1P16045 135 aaKnown RBP12.41□□□□□ -0.42
Trim39-203ENSMUST00000113706 Olfr149Q60888 311 aa12.41□□□□□ -0.42
Trim39-203ENSMUST00000113706 Chchd1Q9CQA6 118 aa12.41□□□□□ -0.42
Trim39-203ENSMUST00000113706 Esp23A8R0V5 104 aa12.41□□□□□ -0.42
Trim39-203ENSMUST00000113706 BC030500E9Q6W0 185 aa12.41□□□□□ -0.42
Trim39-203ENSMUST00000113706 LalbaP29752 143 aa12.41□□□□□ -0.42
Trim39-203ENSMUST00000113706 Minos1Q7TNS2 76 aa12.41□□□□□ -0.42
Trim39-203ENSMUST00000113706 Nanos1Q80WY3 267 aa12.41□□□□□ -0.42
Trim39-203ENSMUST00000113706 Dppa1Q810Y7 116 aa12.41□□□□□ -0.42
Trim39-203ENSMUST00000113706 Tmem189Q99LQ7 271 aa12.41□□□□□ -0.42
Trim39-203ENSMUST00000113706 Zfyve26Q5DU37 2529 aa12.41□□□□□ -0.42
Trim39-203ENSMUST00000113706 P01748 117 aa12.41□□□□□ -0.42
Trim39-203ENSMUST00000113706 Olfr983Q8VG90 315 aa12.41□□□□□ -0.42
Trim39-203ENSMUST00000113706 Olfr1369-ps1A0A140T8K7 317 aa12.4□□□□□ -0.42
Trim39-203ENSMUST00000113706 KhkP97328 298 aa12.4□□□□□ -0.42
Trim39-203ENSMUST00000113706 SmagpQ99KC7 97 aa12.4□□□□□ -0.42
Trim39-203ENSMUST00000113706 Mrpl16Q99N93 251 aa12.4□□□□□ -0.42
Trim39-203ENSMUST00000113706 Nhp2Q9CRB2 153 aaKnown RBP12.4□□□□□ -0.42
Trim39-203ENSMUST00000113706 Reg1P43137 165 aa12.4□□□□□ -0.42
Trim39-203ENSMUST00000113706 Olfr982Q8VGB3 321 aa12.4□□□□□ -0.42
Trim39-203ENSMUST00000113706 Susd2Q9DBX3 820 aa12.4□□□□□ -0.42
Trim39-203ENSMUST00000113706 Trav7n-4A0A075B620 113 aa12.39□□□□□ -0.43
Trim39-203ENSMUST00000113706 Samd5Q3V1H9 173 aa12.39□□□□□ -0.43
Trim39-203ENSMUST00000113706 Nus1Q99LJ8 297 aa12.39□□□□□ -0.43
Trim39-203ENSMUST00000113706 Psmg3Q9CZH3 122 aa12.39□□□□□ -0.43
Trim39-203ENSMUST00000113706 Tmem210Q9D2F0 147 aa12.39□□□□□ -0.43
Trim39-203ENSMUST00000113706 Trav7-1A0A0G2JEV5 112 aa12.39□□□□□ -0.43
Trim39-203ENSMUST00000113706 Olfr1320A2AHM8 319 aa12.39□□□□□ -0.43
Trim39-203ENSMUST00000113706 Amn1B8JKV0 258 aa12.39□□□□□ -0.43
Trim39-203ENSMUST00000113706 1700067P10RikG3X8U2 183 aa12.39□□□□□ -0.43
Trim39-203ENSMUST00000113706 SeleQ00690 612 aa12.39□□□□□ -0.43
Trim39-203ENSMUST00000113706 Pygo2Q80V76 405 aa12.39□□□□□ -0.43
Trim39-203ENSMUST00000113706 Mapk1ip1Q9D7G9 263 aa12.39□□□□□ -0.43
Trim39-203ENSMUST00000113706 Zfp109A0A0U1RPC5 652 aa12.39□□□□□ -0.43
Trim39-203ENSMUST00000113706 SriQ6P069 198 aa12.39□□□□□ -0.43
Trim39-203ENSMUST00000113706 Onecut2Q6XBJ3 505 aa12.39□□□□□ -0.43
Trim39-203ENSMUST00000113706 Slc25a39Q9D8K8 359 aa12.39□□□□□ -0.43
Trim39-203ENSMUST00000113706 Abca1P41233 2261 aa12.39□□□□□ -0.43
Trim39-203ENSMUST00000113706 Gm42420A0A0J9YUQ2 99 aa12.38□□□□□ -0.43
Trim39-203ENSMUST00000113706 Gm17455G3UW87 128 aa12.38□□□□□ -0.43
Trim39-203ENSMUST00000113706 Ube2g1P62254 170 aa12.38□□□□□ -0.43
Trim39-203ENSMUST00000113706 Zmat4Q8BZ94 229 aa12.38□□□□□ -0.43
Trim39-203ENSMUST00000113706 TdhQ8K3F7 373 aa12.38□□□□□ -0.43
Trim39-203ENSMUST00000113706 Olfr1256Q8VGP1 306 aa12.38□□□□□ -0.43
Trim39-203ENSMUST00000113706 Usp9xP70398 2559 aaKnown RBP12.38□□□□□ -0.43
Trim39-203ENSMUST00000113706 Dido1Q8C9B9 2256 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 44.2 ms