RNA–Protein interactions for RNA: ENSMUST00000113054.8

Shroom3-202, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-202ENSMUST00000113054 Iba57Q8CAK1 358 aaKnown RBP11.89□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Trav6d-5A0A075B6B9 112 aa11.89□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Cela2aP05208 271 aa11.89□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Zfp27P10077 819 aa11.89□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Zfp36P22893 319 aaKnown RBP11.89□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Tmem241Q3UME2 297 aa11.89□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Igkv4-80A0A075B5L7 116 aa11.89□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Igkv3-1A0A075B5P1 119 aa11.89□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Hils1Q9QYL0 170 aa11.89□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Igkv4-68A0A0B4J1I7 117 aa11.89□□□□□ -0.51
Shroom3-202ENSMUST00000113054 BmperQ8CJ69 685 aa11.89□□□□□ -0.51
Shroom3-202ENSMUST00000113054 TtrP07309 147 aa11.88□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Glrx5Q80Y14 152 aa11.88□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Trdv2-1A0A0G2JGB9 116 aa11.88□□□□□ -0.51
Shroom3-202ENSMUST00000113054 P01726 129 aa11.88□□□□□ -0.51
Shroom3-202ENSMUST00000113054 PpyP10601 100 aa11.88□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Znf146Q8BQN6 292 aa11.88□□□□□ -0.51
Shroom3-202ENSMUST00000113054 G6pc2Q9Z186 355 aa11.88□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Sptbn2Q68FG2 2388 aa11.88□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Dicer1Q8R418 1916 aa11.88□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Trav16d-dv11A0A075B617 117 aa11.88□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Vmo1Q5SXG7 201 aa11.88□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Gm20854Q62461 227 aa11.88□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Znf329Q6GQR8 522 aa11.88□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Gm15080A2BI02 449 aa11.88□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Gm933J3QPC1 141 aa11.88□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Parm1Q923D3 296 aa11.88□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Gnb1lQ9EQ15 326 aa11.88□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Cmc4Q61908 68 aa11.87□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Hspe1Q64433 102 aaKnown RBP11.87□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Q8R092 253 aa11.87□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Ighv14-1A0A075B5R4 117 aa11.87□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Trbv1A0A0B4J1G7 116 aa11.87□□□□□ -0.51
Shroom3-202ENSMUST00000113054 P01655 112 aa11.87□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Trav6d-7A0A075B6B0 112 aa11.87□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Zfp648D3Z0W3 525 aa11.87□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Edn3P48299 214 aa11.87□□□□□ -0.51
Shroom3-202ENSMUST00000113054 5730522E02RikQ5SP45 163 aa11.87□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Rnf114Q9ET26 229 aa11.87□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Ighv8-4A0A0A6YW26 117 aa11.87□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Gm26727M0QWT1 121 aa11.87□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Foxr2Q3UM89 302 aa11.87□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Gm19410A0A140LJC7 2098 aa11.87□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Trav7n-4A0A075B620 113 aa11.86□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Ighv1-18A0A0A6YXN4 117 aa11.86□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Wfdc11A2A5H7 82 aa11.86□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Znf431E9QAG8 526 aa11.86□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Ly86O88188 162 aa11.86□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Atp6v0e1Q9CQD8 81 aa11.86□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Chchd5Q9CQP3 110 aa11.86□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Igkv14-126A0A075B5K0 117 aa11.86□□□□□ -0.51
Shroom3-202ENSMUST00000113054 P01736 120 aa11.86□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Anapc13Q8R034 74 aa11.86□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Akap6E9Q9K8 2307 aa11.86□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Trav6d-3A0A075B6B3 112 aa11.86□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Trav6-3Q5R1E6 112 aa11.86□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Ttc6G3UYY4 1857 aa11.86□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Nup214Q80U93 2085 aa11.86□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Rnf212F6TQD1 307 aa11.86□□□□□ -0.51
Shroom3-202ENSMUST00000113054 P01788 123 aa11.86□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Rpl36aP83882 106 aaKnown RBP11.86□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Higd1aQ9JLR9 95 aa11.86□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Dock1Q8BUR4 1865 aa11.85□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Gata4Q08369 441 aa11.85□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Msrb3Q8BU85 253 aa11.85□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Ighv5-12-4A0A0A6YWG4 117 aa11.85□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Gm5089A1L3C8 106 aa11.85□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Olfr976Q8VF15 326 aa11.85□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Mrps21P58059 87 aa11.85□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Ormdl2Q9CQZ0 153 aa11.85□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Trbv12-1A0A0B4J1H0 124 aa11.85□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Ovol1Q9WTJ2 267 aa11.85□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Atp6v0bQ91V37 205 aa11.85□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Cacna1hO88427 2365 aa11.84□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Sbf2E9PXF8 1872 aa11.84□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Ighv1-80A0A075B5Y3 117 aa11.84□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Erdr1J3QMM0 206 aa11.84□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Pax9P47242 342 aa11.84□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Pex7P97865 318 aa11.84□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Ighv8-6A0A0A6YXA3 118 aa11.84□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Igkv20-101-2A0A0G2JDU3 113 aa11.84□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Ly6g6fB2RXM6 300 aa11.84□□□□□ -0.51
Shroom3-202ENSMUST00000113054 SeboxP70368 190 aa11.84□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Cd200r1Q9ES57 326 aa11.84□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Trav4-4-dv10A0A075B651 110 aa11.84□□□□□ -0.51
Shroom3-202ENSMUST00000113054 Ssbp2Q9CYZ8 361 aa11.84□□□□□ -0.51
Shroom3-202ENSMUST00000113054 OtofQ9ESF1 1997 aa11.83□□□□□ -0.52
Shroom3-202ENSMUST00000113054 Trav6-1A0A075B5Z8 112 aa11.83□□□□□ -0.52
Shroom3-202ENSMUST00000113054 Ear14F6YUX7 155 aa11.83□□□□□ -0.52
Shroom3-202ENSMUST00000113054 Ighv1-62-3P01754 117 aa11.83□□□□□ -0.52
Shroom3-202ENSMUST00000113054 P01811 117 aa11.83□□□□□ -0.52
Shroom3-202ENSMUST00000113054 P04946 108 aa11.83□□□□□ -0.52
Shroom3-202ENSMUST00000113054 Chac1Q8R3J5 223 aa11.83□□□□□ -0.52
Shroom3-202ENSMUST00000113054 Igkv9-123A0A140T8N8 117 aa11.83□□□□□ -0.52
Shroom3-202ENSMUST00000113054 Atp23Q9CWQ3 201 aa11.83□□□□□ -0.52
Shroom3-202ENSMUST00000113054 Gm45785A0A1B0GT05 94 aa11.83□□□□□ -0.52
Shroom3-202ENSMUST00000113054 Olfr211Q8VGH2 309 aa11.83□□□□□ -0.52
Shroom3-202ENSMUST00000113054 Hbb-b2P02089 147 aa11.83□□□□□ -0.52
Shroom3-202ENSMUST00000113054 PlnP61014 52 aa11.83□□□□□ -0.52
Shroom3-202ENSMUST00000113054 Tmem86bQ497J1 226 aa11.83□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 73.4 ms