RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Defb48Q3UW22 87 aa6.92□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Fam57aQ5ND56 257 aa6.92□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Atp6v0e2Q91XE7 81 aa6.92□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Gm26657Q9CVR1 127 aa6.92□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Psmb3Q9R1P1 205 aa6.92□□□□□ -1.3
Upf3b-201ENSMUST00000076265 SetxA2AKX3 2646 aa6.92□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Nckap5E9QAE1 1909 aa6.92□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Trbv20A0A0B4J1H5 111 aa6.92□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Fam104aA2A6P4 185 aa6.92□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Klk12B2RVZ0 247 aa6.92□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Gm10647E9Q8X0 124 aa6.92□□□□□ -1.3
Upf3b-201ENSMUST00000076265 PmchP56942 165 aa6.92□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Rpl22P67984 128 aaKnown RBP6.92□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Olfr488Q8VG02 314 aa6.92□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Lrp4Q8VI56 1905 aa6.91□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Polr2jO08740 117 aaKnown RBP6.91□□□□□ -1.3
Upf3b-201ENSMUST00000076265 CirbpP60824 172 aaKnown RBP6.91□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Fndc4Q3TR08 231 aa6.91□□□□□ -1.3
Upf3b-201ENSMUST00000076265 1500011B03RikQ3TTH7 73 aa6.91□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Hs3st6Q5GFD5 342 aa6.91□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Cstl1Q80Y72 140 aa6.91□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Tmem230Q8CIB6 120 aa6.91□□□□□ -1.3
Upf3b-201ENSMUST00000076265 SdhdQ9CXV1 159 aa6.91□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Zc2hc1bQ9D534 172 aa6.91□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Ndufa11Q9D8B4 141 aa6.91□□□□□ -1.3
Upf3b-201ENSMUST00000076265 CtrlQ9ER05 264 aa6.91□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Ankrd11E9Q4F7 2643 aa6.91□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Efna3O08545 230 aa6.9□□□□□ -1.3
Upf3b-201ENSMUST00000076265 P06344 263 aa6.9□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Wfdc6aQ3UW55 136 aa6.9□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Ankrd37Q569N2 159 aa6.9□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Znf329Q6GQR8 522 aa6.9□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Txnl4bQ8BUH1 149 aa6.9□□□□□ -1.3
Upf3b-201ENSMUST00000076265 AmtQ8CFA2 403 aaKnown RBP6.9□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Tmem159Q922Z1 161 aa6.9□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Ociad1Q9CRD0 247 aaKnown RBP6.9□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Uchl1Q9R0P9 223 aa6.9□□□□□ -1.3
Upf3b-201ENSMUST00000076265 Bcl2l10Q9Z0F3 191 aa6.9□□□□□ -1.3
Upf3b-201ENSMUST00000076265 CenpeQ6RT24 2474 aaKnown RBP6.9□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Trav14-3A0A075B607 120 aa6.9□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Igkv3-12A0A140T8P0 119 aa6.9□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Gm8127E9Q0P0 100 aa6.9□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Ca5aP23589 299 aa6.9□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Lrrk1Q3UHC2 2014 aa6.9□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Defa22Q8C1N8 93 aa6.9□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Gpr84Q8CIM5 396 aa6.9□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Slc50a1Q9CXK4 221 aa6.9□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Znf414Q9DCK4 299 aa6.9□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Ak3Q9WTP7 227 aa6.9□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Zfp352A2AML7 551 aa6.89□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Lamtor3O88653 124 aa6.89□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Fcer1gP20491 86 aa6.89□□□□□ -1.31
Upf3b-201ENSMUST00000076265 GgnQ80WJ1 673 aa6.89□□□□□ -1.31
Upf3b-201ENSMUST00000076265 A930002H24RikQ8C8Y3 163 aa6.89□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Vmn1r192Q8K4C9 300 aa6.89□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Vmn1r4Q8R2D3 297 aa6.89□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Olfr1199Q8VF94 310 aa6.89□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Olfr476Q8VGI4 310 aa6.89□□□□□ -1.31
Upf3b-201ENSMUST00000076265 PsenenQ9CQR7 101 aa6.89□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Kcne3Q9WTW2 103 aa6.89□□□□□ -1.31
Upf3b-201ENSMUST00000076265 SptbP15508 2128 aa6.89□□□□□ -1.31
Upf3b-201ENSMUST00000076265 AcacbE9Q4Z2 2448 aa6.89□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Gm45871A0A1B0GRI9 540 aa6.89□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Gm14862B1AV28 81 aa6.89□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Gm21834J3QN05 151 aa6.89□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Lsm2O35900 95 aaKnown RBP6.89□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Cd8bP10300 213 aa6.89□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Olfr473Q8VG44 310 aa6.89□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Olfr1272Q8VGN8 308 aa6.89□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Q9D131 166 aa6.89□□□□□ -1.31
Upf3b-201ENSMUST00000076265 2310034C09RikQ9D746 214 aa6.89□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Ncor2Q9WU42 2472 aaKnown RBP6.89□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Sdk2Q6V4S5 2176 aa6.89□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Usp24B1AY13 2617 aaKnown RBP6.88□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Gm14295A2BG91 834 aa6.88□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Gm15217A2CG07 155 aa6.88□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Gm17577J3QNF7 156 aa6.88□□□□□ -1.31
Upf3b-201ENSMUST00000076265 A630076J17RikJ3QQ32 107 aa6.88□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Fgf2P15655 154 aa6.88□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Defa20Q45VN2 95 aa6.88□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Defb46Q4QY34 57 aa6.88□□□□□ -1.31
Upf3b-201ENSMUST00000076265 A730061H03RikQ8BGD2 154 aa6.88□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Olfr481Q8VGI5 312 aa6.88□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Efcab10Q9D581 132 aa6.88□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Trbv19A0A0B4J1H4 117 aa6.88□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Cypt14J3QPF7 87 aa6.88□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Rem1O35929 297 aa6.88□□□□□ -1.31
Upf3b-201ENSMUST00000076265 P04212 136 aa6.88□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Aqp1Q02013 269 aa6.88□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Vmn1r215Q8R264 300 aa6.88□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Vmn1r75Q8R289 305 aa6.88□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Tmem242Q8VCR3 140 aa6.88□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Fis1Q9CQ92 152 aa6.88□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Mrps17Q9CQE3 120 aaKnown RBP6.88□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Sh2d6Q9D413 297 aa6.88□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Tanc2A2A690 1994 aa6.87□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Trav12-3A0A075B648 115 aa6.87□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Gm45844A0A1B0GRQ2 137 aa6.87□□□□□ -1.31
Upf3b-201ENSMUST00000076265 P01783 136 aa6.87□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Crisp3Q03402 241 aa6.87□□□□□ -1.31
Retrieved 100 of 22,080 RNA–protein pairs in 46.5 ms