RNA–Protein interactions for RNA: ENSMUST00000033898.9

Col4a1-201, Transcript of Collagen alpha-1(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a1, Length 6,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1-201ENSMUST00000033898 E130218I03RikA0A0U1RNU5 63 aa11.8□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Gm21616B6ZB74 166 aa11.79□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Tmem92B7ZWI3 162 aa11.79□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Efna4O08542 206 aa11.79□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Tmem86bQ497J1 226 aa11.79□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Mrpl32Q9DCI9 187 aaKnown RBP11.79□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Trav6n-5A0A075B621 112 aa11.79□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Igkv4-59A0A0B4J1I8 117 aa11.79□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Gm20458E9PXJ7 78 aa11.79□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Tm2d3Q8BJ83 261 aa11.79□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Trav3n-3A0A0G2JEM0 114 aa11.79□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Amn1B8JKV0 258 aa11.79□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Rnf217D3YYI7 515 aa11.79□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Ly86O88188 162 aa11.79□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Klk1b4P00757 256 aa11.79□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Zfp36l2P23949 484 aaKnown RBP11.79□□□□□ -0.52
Col4a1-201ENSMUST00000033898 4930596D02RikQ3V0H9 216 aa11.79□□□□□ -0.52
Col4a1-201ENSMUST00000033898 LgalslbQ7TPX9 165 aa11.79□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Olfr745Q7TRL9 328 aa11.79□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Igkv4-81A0A0G2JEY5 119 aa11.79□□□□□ -0.52
Col4a1-201ENSMUST00000033898 BmperQ8CJ69 685 aa11.79□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Mgst3Q9CPU4 153 aa11.79□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Igkv4-72A0A0B4J1I4 117 aa11.79□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Igkv4-61A0A0G2JH00 117 aa11.79□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Vmo1Q5SXG7 201 aa11.79□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Shisal2aA2A9G7 189 aa11.78□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Gm15093A2BI72 449 aa11.78□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Gm15097E9QA14 449 aa11.78□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Rpl32P62911 135 aaKnown RBP11.78□□□□□ -0.52
Col4a1-201ENSMUST00000033898 OpalinQ7M750 143 aa11.78□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Q8VE95 218 aa11.78□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Gm20219A0A1B0GRQ3 87 aa11.78□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Tcrg-C3L7N479 172 aa11.78□□□□□ -0.52
Col4a1-201ENSMUST00000033898 P03985 172 aa11.78□□□□□ -0.52
Col4a1-201ENSMUST00000033898 OstcQ78XF5 149 aa11.78□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Gm4894Q8CA09 118 aa11.78□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Gm4763Q8CFJ5 196 aa11.78□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Ly6g6fB2RXM6 300 aa11.78□□□□□ -0.52
Col4a1-201ENSMUST00000033898 SeboxP70368 190 aa11.78□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Rpl36aP83882 106 aaKnown RBP11.78□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Timp3P39876 211 aa11.78□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Folr2Q05685 251 aa11.78□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Znf22Q9ERU3 237 aa11.78□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Cd200r1Q9ES57 326 aa11.78□□□□□ -0.52
Col4a1-201ENSMUST00000033898 PerpQ9JK95 193 aa11.78□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Ighv8-6A0A0A6YXA3 118 aa11.77□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Vwc2lQ505H4 222 aa11.77□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Znf260Q62513 407 aa11.77□□□□□ -0.52
Col4a1-201ENSMUST00000033898 IappP12968 93 aa11.77□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Usmg5Q78IK2 58 aa11.77□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Ankrd39Q9D2X0 183 aa11.77□□□□□ -0.52
Col4a1-201ENSMUST00000033898 Q80X32 188 aaKnown RBP11.77□□□□□ -0.53
Col4a1-201ENSMUST00000033898 LbhQ9CX60 105 aa11.77□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Plpp2Q9DAX2 276 aa11.77□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Myo16Q5DU14 1919 aa11.77□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Hist1h2bmP10854 126 aa11.77□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Klk1b22P15948 259 aa11.77□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Hist1h2bhQ64478 126 aa11.77□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Hist2h2bbQ64525 126 aa11.77□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Hist1h2bcQ6ZWY9 126 aaKnown RBP11.77□□□□□ -0.53
Col4a1-201ENSMUST00000033898 4930583I09RikQ9D2E3 102 aa11.77□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Trav6-5A0A075B6B5 112 aa11.76□□□□□ -0.53
Col4a1-201ENSMUST00000033898 2210407C18RikQ6YI28 220 aa11.76□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Ear14F6YUX7 155 aa11.76□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Tspoap1Q7TNF8 1846 aa11.76□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Ighv1-31A0A0A6YWK5 117 aa11.76□□□□□ -0.53
Col4a1-201ENSMUST00000033898 ElaneQ3UP87 265 aa11.76□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Sipa1l3G3X9J0 1776 aa11.76□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Igkv4-63A0A0G2JFU6 117 aa11.76□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Psg25Q497W1 475 aa11.76□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Dmrt3Q80WT2 476 aa11.76□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Znrd1Q791N7 123 aa11.76□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Plac1Q9JI83 173 aa11.76□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Zgrf1Q0VGT4 1863 aa11.75□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Trav4-4-dv10A0A075B651 110 aa11.75□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Gm10521E9PZK0 135 aa11.75□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Foxf2O54743 446 aa11.75□□□□□ -0.53
Col4a1-201ENSMUST00000033898 P18533 117 aa11.75□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Znf740Q6NZQ6 180 aa11.75□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Ttc9cQ810A3 171 aa11.75□□□□□ -0.53
Col4a1-201ENSMUST00000033898 MplkipQ9D011 178 aa11.75□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Trav4-2A0A075B638 110 aa11.75□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Tmem238A9JSM3 176 aa11.75□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Ovol1Q9WTJ2 267 aa11.75□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Trav14d-3-dv8A0A075B619 120 aa11.75□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Gm28269A0A087WSG3 125 aa11.75□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Cmc4Q61908 68 aa11.75□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Gm2174F6ZVF2 133 aa11.75□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Lgals6O54891 301 aa11.75□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Anapc10Q8K2H6 185 aa11.75□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Ssbp2Q9CYZ8 361 aa11.75□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Wfdc9Q3UW41 83 aa11.75□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Olfr211Q8VGH2 309 aa11.75□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Igkv4-54A0A0G2JES9 117 aa11.74□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Olfr1373Q7TQT6 311 aa11.74□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Ccl17F6R5P4 103 aa11.74□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Trav7-2Q5R1I3 112 aa11.74□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Trav3-1Q5R1I8 114 aa11.74□□□□□ -0.53
Col4a1-201ENSMUST00000033898 AgaQ64191 346 aa11.74□□□□□ -0.53
Col4a1-201ENSMUST00000033898 Srsf7Q8BL97 267 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 95.7 ms