RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 BC048562Q80ZQ7 204 aa13.4□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Olfr491Q8VG06 310 aa13.4□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Trav6d-7A0A075B6B0 112 aa13.4□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Slamf7Q8BHK6 333 aa13.4□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Ss18l1Q8BW22 402 aa13.4□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Prop1P97458 223 aa13.39□□□□□ -0.27
Ctcf-201ENSMUST00000005841 PerpQ9JK95 193 aa13.39□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Tarm1B6A8R8 288 aa13.39□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Thy1P01831 162 aa13.39□□□□□ -0.27
Ctcf-201ENSMUST00000005841 RhodP97348 210 aa13.39□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Trappc1Q5NCF2 145 aa13.39□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Tmem204Q7TQI0 226 aa13.39□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Trav8n-2A0A075B633 112 aa13.38□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Igkv19-93A0A0G2JFZ3 115 aa13.38□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Gm5093E9PZB3 174 aa13.38□□□□□ -0.27
Ctcf-201ENSMUST00000005841 P01896 185 aa13.38□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Saa4P31532 130 aa13.38□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Gm10604Q3V0X7 143 aa13.38□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Cfap46E9Q2C0 2641 aa13.38□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Olfr251E9Q891 316 aa13.38□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Mfge8P21956 463 aaKnown RBP13.38□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Prr30Q9D9B7 401 aa13.38□□□□□ -0.27
Ctcf-201ENSMUST00000005841 P01793 123 aa13.37□□□□□ -0.27
Ctcf-201ENSMUST00000005841 GaptQ8CB93 157 aa13.37□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Olfr1330Q8VEY6 315 aa13.37□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Gm3512L7N206 146 aa13.37□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Slc25a5P51881 298 aaKnown RBP13.37□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Smad7O35253 426 aa13.37□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Cby1Q9D1C2 127 aa13.37□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Lamp5Q9D387 280 aa13.37□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Smg1Q8BKX6 3658 aaKnown RBP13.37□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Defa35E9QLQ1 93 aa13.36□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Fgfbp1O70514 251 aa13.36□□□□□ -0.27
Ctcf-201ENSMUST00000005841 P0C1Z5 52 aa13.36□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Znf691Q3TDE8 283 aa13.36□□□□□ -0.27
Ctcf-201ENSMUST00000005841 A0A1Y7VMQ4 148 aa13.35□□□□□ -0.27
Ctcf-201ENSMUST00000005841 IappP12968 93 aa13.35□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Col9a1Q05722 921 aa13.35□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Ang4Q3TMQ6 144 aa13.35□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Ccl2P10148 148 aa13.35□□□□□ -0.27
Ctcf-201ENSMUST00000005841 TbpP29037 316 aa13.35□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Vmn1r61W4VSP5 300 aa13.35□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Dmxl2Q8BPN8 3032 aa13.35□□□□□ -0.27
Ctcf-201ENSMUST00000005841 SbpP15501 199 aa13.35□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Dlx6P70397 175 aa13.35□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Gm9945Q8BNZ3 91 aa13.35□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Olfr1012Q8VFJ7 311 aa13.35□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Ndufc2Q9CQ54 120 aa13.35□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Platr25A0A1Y7VIZ1 466 aa13.34□□□□□ -0.27
Ctcf-201ENSMUST00000005841 9830107B12RikD3Z5D6 160 aa13.34□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Zfp983E9PUT0 460 aa13.34□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Gm4791J3QQ14 102 aa13.34□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Cdv3Q4VAA2 281 aaKnown RBP13.34□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Lyzl1Q9CPX3 148 aa13.34□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Plekhb2Q9QZC7 221 aa13.34□□□□□ -0.27
Ctcf-201ENSMUST00000005841 F8Q06194 2319 aa13.34□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Defa-rs12P50716 91 aa13.34□□□□□ -0.27
Ctcf-201ENSMUST00000005841 G430049J08RikQ3TL09 166 aa13.34□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Tmem88bQ3TYP4 173 aa13.34□□□□□ -0.27
Ctcf-201ENSMUST00000005841 CnfnQ6PCW6 111 aa13.34□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Abca7Q91V24 2159 aa13.34□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Trav14n-2A0A0G2JDF5 121 aa13.34□□□□□ -0.27
Ctcf-201ENSMUST00000005841 P04944 107 aa13.34□□□□□ -0.27
Ctcf-201ENSMUST00000005841 ErhP84089 104 aa13.34□□□□□ -0.27
Ctcf-201ENSMUST00000005841 KncnQ307W7 124 aa13.34□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Wfdc8Q4KUS1 273 aa13.34□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Olfr1453Q8VFX0 307 aa13.34□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Olfr364-ps1A0A140T8Q2 307 aa13.33□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Cited2O35740 269 aa13.33□□□□□ -0.27
Ctcf-201ENSMUST00000005841 P18525 117 aa13.33□□□□□ -0.27
Ctcf-201ENSMUST00000005841 Smr3aQ61900 147 aa13.33□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Alkbh6Q8K2U2 238 aa13.33□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Tmem97Q8VD00 176 aa13.33□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Olfr127Q8VF25 323 aa13.33□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Cnn3Q9DAW9 330 aaKnown RBP13.33□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Ly96Q9JHF9 160 aa13.33□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Tpsg1Q9QUL7 311 aa13.33□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Cd59bP58019 129 aa13.32□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Odf3l1Q810P2 275 aa13.32□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Gnb1lQ9EQ15 326 aa13.32□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Ighv6-7A0A0A6YWU3 119 aa13.32□□□□□ -0.28
Ctcf-201ENSMUST00000005841 F2rl2O08675 369 aa13.32□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Zzef1Q5SSH7 2924 aa13.32□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Gtf2h5Q8K2X8 71 aa13.32□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Olfr1462Q8VFW3 307 aa13.32□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Ahctf1Q8CJF7 2243 aaKnown RBP13.32□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Trav7-1A0A0G2JEV5 112 aa13.32□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Gm15217A2CG07 155 aa13.32□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Saa3P04918 122 aa13.32□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Snx22Q8C084 192 aa13.32□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Cdkn1bP46414 197 aa13.31□□□□□ -0.28
Ctcf-201ENSMUST00000005841 HeylQ9DBX7 326 aa13.31□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Rabac1Q9Z0S9 185 aa13.31□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Vwc2lQ505H4 222 aa13.31□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Ebi3O35228 228 aa13.31□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Odf3Q920N1 254 aa13.31□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Gm20517G3UVU6 152 aa13.3□□□□□ -0.28
Ctcf-201ENSMUST00000005841 P01806 116 aa13.3□□□□□ -0.28
Ctcf-201ENSMUST00000005841 H2-DMb1P35737 261 aa13.3□□□□□ -0.28
Ctcf-201ENSMUST00000005841 Rpl27aP14115 148 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 30.7 ms