RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 BVES-AS1Q5T3Y7 98 aa5.33□□□□□ -1.56
VMP1-204ENST00000587259 LELP1Q5T871 98 aa5.33□□□□□ -1.56
VMP1-204ENST00000587259 C15orf53Q8NAA6 179 aa5.33□□□□□ -1.56
VMP1-204ENST00000587259 VSIG2Q96IQ7 327 aa5.33□□□□□ -1.56
VMP1-204ENST00000587259 DMBT1Q9UGM3 2413 aaPredicted RBP5.32□□□□□ -1.56
VMP1-204ENST00000587259 TMEM238C9JI98 176 aa5.32□□□□□ -1.56
VMP1-204ENST00000587259 GAGE6Q13070 117 aa5.32□□□□□ -1.56
VMP1-204ENST00000587259 SS18Q15532 418 aa5.32□□□□□ -1.56
VMP1-204ENST00000587259 ORAOV1Q8WV07 137 aa5.32□□□□□ -1.56
VMP1-204ENST00000587259 COPS9Q8WXC6 57 aa5.32□□□□□ -1.56
VMP1-204ENST00000587259 FAM104AQ969W3 186 aa5.32□□□□□ -1.56
VMP1-204ENST00000587259 Q9H8V8 135 aa5.32□□□□□ -1.56
VMP1-204ENST00000587259 SPANXB1Q9NS25 103 aaPredicted RBP5.32□□□□□ -1.56
VMP1-204ENST00000587259 TRAV13-1A0A0B4J241 112 aa5.31□□□□□ -1.56
VMP1-204ENST00000587259 TMEM262E9PQX1 116 aa5.31□□□□□ -1.56
VMP1-204ENST00000587259 IGHV3-30-3P0DP02 117 aa5.31□□□□□ -1.56
VMP1-204ENST00000587259 CCL18P55774 89 aa5.31□□□□□ -1.56
VMP1-204ENST00000587259 HAMPP81172 84 aa5.31□□□□□ -1.56
VMP1-204ENST00000587259 RNASE13Q5GAN3 156 aaKnown RBP5.31□□□□□ -1.56
VMP1-204ENST00000587259 LINC00242Q5T6M2 205 aa5.31□□□□□ -1.56
VMP1-204ENST00000587259 Q6ZVH6 145 aa5.31□□□□□ -1.56
VMP1-204ENST00000587259 CEND1Q8N111 149 aa5.31□□□□□ -1.56
VMP1-204ENST00000587259 LINC01561Q8N1V8 128 aa5.31□□□□□ -1.56
VMP1-204ENST00000587259 HIST1H4GQ99525 98 aa5.31□□□□□ -1.56
VMP1-204ENST00000587259 TM2D2Q9BX73 214 aa5.31□□□□□ -1.56
VMP1-204ENST00000587259 A0A096LPF7 62 aa5.3□□□□□ -1.56
VMP1-204ENST00000587259 EPM2AB3EWF7 344 aa5.3□□□□□ -1.56
VMP1-204ENST00000587259 INAFM2P0DMQ5 153 aa5.3□□□□□ -1.56
VMP1-204ENST00000587259 PTTG1IPP53801 180 aa5.3□□□□□ -1.56
VMP1-204ENST00000587259 HERV-K104P63124 156 aa5.3□□□□□ -1.56
VMP1-204ENST00000587259 CIRBPQ14011 172 aaKnown RBP5.3□□□□□ -1.56
VMP1-204ENST00000587259 ESRGQ1W209 222 aa5.3□□□□□ -1.56
VMP1-204ENST00000587259 TP73-AS1Q9UF72 201 aa5.3□□□□□ -1.56
VMP1-204ENST00000587259 CDKN2A-AS1Q9UH64 79 aa5.3□□□□□ -1.56
VMP1-204ENST00000587259 FLG2Q5D862 2391 aaPredicted RBP5.3□□□□□ -1.56
VMP1-204ENST00000587259 IGLV5-39A0A0G2JS06 123 aa5.29□□□□□ -1.56
VMP1-204ENST00000587259 NDUFA1O15239 70 aa5.29□□□□□ -1.56
VMP1-204ENST00000587259 TIMM17BO60830 172 aa5.29□□□□□ -1.56
VMP1-204ENST00000587259 SMR3BP02814 79 aaPredicted RBP5.29□□□□□ -1.56
VMP1-204ENST00000587259 XGP55808 180 aa5.29□□□□□ -1.56
VMP1-204ENST00000587259 RBX1P62877 108 aa5.29□□□□□ -1.56
VMP1-204ENST00000587259 SRSF9Q13242 221 aaKnown RBP eCLIP5.29□□□□□ -1.56
VMP1-204ENST00000587259 NDUFA12Q9UI09 145 aa5.29□□□□□ -1.56
VMP1-204ENST00000587259 A0A0J9YXY3 114 aa5.28□□□□□ -1.56
VMP1-204ENST00000587259 LINC00959A0A1B0GUT2 108 aa5.28□□□□□ -1.56
VMP1-204ENST00000587259 SPINK8P0C7L1 97 aa5.28□□□□□ -1.56
VMP1-204ENST00000587259 DNAH10OSP0CZ25 163 aa5.28□□□□□ -1.56
VMP1-204ENST00000587259 RPL24P83731 157 aaKnown RBP5.28□□□□□ -1.56
VMP1-204ENST00000587259 Q5VSD8 79 aa5.28□□□□□ -1.56
VMP1-204ENST00000587259 TTTY13Q9BZ97 58 aa5.28□□□□□ -1.56
VMP1-204ENST00000587259 FAT1Q14517 4588 aa5.28□□□□□ -1.56
VMP1-204ENST00000587259 MYCBP2O75592 4640 aa5.27□□□□□ -1.57
VMP1-204ENST00000587259 IGLV4-60A0A075B6I1 120 aa5.27□□□□□ -1.57
VMP1-204ENST00000587259 A0A087WZ39 114 aa5.27□□□□□ -1.57
VMP1-204ENST00000587259 IGHV3OR16-9A0A0B4J2B5 98 aa5.27□□□□□ -1.57
VMP1-204ENST00000587259 SMIM1B2RUZ4 78 aa5.27□□□□□ -1.57
VMP1-204ENST00000587259 CRPP02741 224 aa5.27□□□□□ -1.57
VMP1-204ENST00000587259 ANGP03950 147 aaKnown RBP5.27□□□□□ -1.57
VMP1-204ENST00000587259 SMIM13P0DJ93 91 aa5.27□□□□□ -1.57
VMP1-204ENST00000587259 TSPEAR-AS2P59090 65 aa5.27□□□□□ -1.57
VMP1-204ENST00000587259 KRTAP10-1P60331 282 aa5.27□□□□□ -1.57
VMP1-204ENST00000587259 Q6ZRN7 208 aaPredicted RBP5.27□□□□□ -1.57
VMP1-204ENST00000587259 PPDPFQ9H3Y8 114 aa5.27□□□□□ -1.57
VMP1-204ENST00000587259 COX11Q9Y6N1 276 aa5.27□□□□□ -1.57
VMP1-204ENST00000587259 IGHV3-64A0A075B6Q5 118 aa5.26□□□□□ -1.57
VMP1-204ENST00000587259 TRAV8-3A0A0A6YYJ7 113 aa5.26□□□□□ -1.57
VMP1-204ENST00000587259 TRAV8-4A0A0B4J246 113 aa5.26□□□□□ -1.57
VMP1-204ENST00000587259 A0A1B0GV90 55 aa5.26□□□□□ -1.57
VMP1-204ENST00000587259 APOMO95445 188 aa5.26□□□□□ -1.57
VMP1-204ENST00000587259 IFITM1P13164 125 aa5.26□□□□□ -1.57
VMP1-204ENST00000587259 CXCL5P42830 114 aa5.26□□□□□ -1.57
VMP1-204ENST00000587259 REG3AQ06141 175 aa5.26□□□□□ -1.57
VMP1-204ENST00000587259 LYRM7Q5U5X0 104 aa5.26□□□□□ -1.57
VMP1-204ENST00000587259 CD164L2Q6UWJ8 174 aa5.26□□□□□ -1.57
VMP1-204ENST00000587259 LYPD5Q6UWN5 251 aa5.26□□□□□ -1.57
VMP1-204ENST00000587259 SPANXDQ9BXN6 97 aa5.26□□□□□ -1.57
VMP1-204ENST00000587259 SPANXCQ9NY87 97 aa5.26□□□□□ -1.57
VMP1-204ENST00000587259 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.25□□□□□ -1.57
VMP1-204ENST00000587259 IGKV3OR2-268A0A0C4DH90 116 aa5.25□□□□□ -1.57
VMP1-204ENST00000587259 A0A1B0GWB2 263 aa5.25□□□□□ -1.57
VMP1-204ENST00000587259 PRSS2P07478 247 aa5.25□□□□□ -1.57
VMP1-204ENST00000587259 COX6A2Q02221 97 aa5.25□□□□□ -1.57
VMP1-204ENST00000587259 MIAQ16674 131 aa5.25□□□□□ -1.57
VMP1-204ENST00000587259 TTC32Q5I0X7 151 aa5.25□□□□□ -1.57
VMP1-204ENST00000587259 COX7B2Q8TF08 81 aa5.25□□□□□ -1.57
VMP1-204ENST00000587259 NHP2Q9NX24 153 aaKnown RBP5.25□□□□□ -1.57
VMP1-204ENST00000587259 SRRM2Q9UQ35 2752 aaKnown RBP5.24□□□□□ -1.57
VMP1-204ENST00000587259 C9orf118A6NHY6 69 aa5.24□□□□□ -1.57
VMP1-204ENST00000587259 KRTAP9-7A8MTY7 169 aa5.24□□□□□ -1.57
VMP1-204ENST00000587259 K7EP13 123 aa5.24□□□□□ -1.57
VMP1-204ENST00000587259 COX7A2LO14548 114 aa5.24□□□□□ -1.57
VMP1-204ENST00000587259 TAX1BP3O14907 124 aa5.24□□□□□ -1.57
VMP1-204ENST00000587259 IGHV3-30P01768 117 aa5.24□□□□□ -1.57
VMP1-204ENST00000587259 IGHV3-30-5P0DP03 117 aa5.24□□□□□ -1.57
VMP1-204ENST00000587259 FXYD2P54710 66 aa5.24□□□□□ -1.57
VMP1-204ENST00000587259 KRTAP19-4Q3LI73 84 aa5.24□□□□□ -1.57
VMP1-204ENST00000587259 Q8IZM0 81 aa5.24□□□□□ -1.57
VMP1-204ENST00000587259 LINC00269Q8N2A0 174 aa5.24□□□□□ -1.57
VMP1-204ENST00000587259 C10orf126Q8N4M7 172 aa5.24□□□□□ -1.57
VMP1-204ENST00000587259 UPK3BQ9BT76 320 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms