RNA–Protein interactions for RNA: ENST00000551301.1

SLC48A1-208, Transcript of solute carrier family 48 member 1, humanhuman

TSL 2

Gene SLC48A1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-208ENST00000551301 IGLV7-43P04211 117 aa12.45□□□□□ -0.42
SLC48A1-208ENST00000551301 ADCYAP1P18509 176 aa12.45□□□□□ -0.42
SLC48A1-208ENST00000551301 ERASQ7Z444 233 aa12.45□□□□□ -0.42
SLC48A1-208ENST00000551301 GNB1LQ9BYB4 327 aa12.45□□□□□ -0.42
SLC48A1-208ENST00000551301 TNXBP22105 4242 aa12.43□□□□□ -0.42
SLC48A1-208ENST00000551301 CDKN2A-AS1Q9UH64 79 aa12.43□□□□□ -0.42
SLC48A1-208ENST00000551301 F8VRH5 84 aa12.41□□□□□ -0.42
SLC48A1-208ENST00000551301 CXCL5P42830 114 aa12.41□□□□□ -0.42
SLC48A1-208ENST00000551301 LINC00469Q8N7U9 141 aa12.41□□□□□ -0.42
SLC48A1-208ENST00000551301 FA2HQ7L5A8 372 aa12.4□□□□□ -0.42
SLC48A1-208ENST00000551301 SMCO4Q9NRQ5 59 aa12.4□□□□□ -0.42
SLC48A1-208ENST00000551301 C9orf129Q5T035 196 aaKnown RBP12.39□□□□□ -0.43
SLC48A1-208ENST00000551301 COMMD7Q86VX2 200 aa12.39□□□□□ -0.43
SLC48A1-208ENST00000551301 TINCRA0A1B0GVN0 87 aa12.38□□□□□ -0.43
SLC48A1-208ENST00000551301 FABP9Q0Z7S8 132 aa12.38□□□□□ -0.43
SLC48A1-208ENST00000551301 LBHQ53QV2 105 aaPredicted RBP12.38□□□□□ -0.43
SLC48A1-208ENST00000551301 UBR4Q5T4S7 5183 aa12.37□□□□□ -0.43
SLC48A1-208ENST00000551301 H0Y9J4 135 aa12.37□□□□□ -0.43
SLC48A1-208ENST00000551301 RHEBQ15382 184 aa12.37□□□□□ -0.43
SLC48A1-208ENST00000551301 PDZD11Q5EBL8 140 aa12.36□□□□□ -0.43
SLC48A1-208ENST00000551301 MRPL18Q9H0U6 180 aaKnown RBP12.36□□□□□ -0.43
SLC48A1-208ENST00000551301 LINC01546A6NGU7 62 aa12.35□□□□□ -0.43
SLC48A1-208ENST00000551301 KRTAP11-1Q8IUC1 163 aa12.35□□□□□ -0.43
SLC48A1-208ENST00000551301 KRTAP7-1Q8IUC3 87 aa12.35□□□□□ -0.43
SLC48A1-208ENST00000551301 XAGE1AQ9HD64 81 aa12.35□□□□□ -0.43
SLC48A1-208ENST00000551301 RPS10P5Q9NQ39 176 aa12.35□□□□□ -0.43
SLC48A1-208ENST00000551301 ODF1Q14990 250 aa12.34□□□□□ -0.43
SLC48A1-208ENST00000551301 PMVKQ15126 192 aa12.34□□□□□ -0.43
SLC48A1-208ENST00000551301 COX7B2Q8TF08 81 aa12.34□□□□□ -0.43
SLC48A1-208ENST00000551301 CST9LQ9H4G1 147 aa12.34□□□□□ -0.43
SLC48A1-208ENST00000551301 SMIM1B2RUZ4 78 aa12.33□□□□□ -0.44
SLC48A1-208ENST00000551301 H3BRM9 83 aa12.33□□□□□ -0.44
SLC48A1-208ENST00000551301 C10orf91Q5T1B1 145 aa12.32□□□□□ -0.44
SLC48A1-208ENST00000551301 C22orf24Q9Y442 160 aa12.32□□□□□ -0.44
SLC48A1-208ENST00000551301 IGLV5-45A0A087WSX0 123 aa12.31□□□□□ -0.44
SLC48A1-208ENST00000551301 NUPR1O60356 82 aa12.31□□□□□ -0.44
SLC48A1-208ENST00000551301 IGLV1-50A0A075B6I6 118 aa12.3□□□□□ -0.44
SLC48A1-208ENST00000551301 PRR26Q8N8Z3 221 aa12.3□□□□□ -0.44
SLC48A1-208ENST00000551301 TP73-AS1Q9UF72 201 aa12.3□□□□□ -0.44
SLC48A1-208ENST00000551301 CARHSP1Q9Y2V2 147 aaKnown RBP12.3□□□□□ -0.44
SLC48A1-208ENST00000551301 SPINK8P0C7L1 97 aa12.28□□□□□ -0.44
SLC48A1-208ENST00000551301 NDUFA6P56556 154 aa12.28□□□□□ -0.44
SLC48A1-208ENST00000551301 MRPL55Q7Z7F7 128 aaKnown RBP12.28□□□□□ -0.44
SLC48A1-208ENST00000551301 ATP5LO75964 103 aa12.27□□□□□ -0.45
SLC48A1-208ENST00000551301 RPL13AP40429 203 aaKnown RBP12.27□□□□□ -0.45
SLC48A1-208ENST00000551301 TRAPPC1Q9Y5R8 145 aa12.27□□□□□ -0.45
SLC48A1-208ENST00000551301 ZNF861PO60384 105 aa12.26□□□□□ -0.45
SLC48A1-208ENST00000551301 NDUFA5Q16718 116 aa12.25□□□□□ -0.45
SLC48A1-208ENST00000551301 LINC00614P0C842 121 aa12.24□□□□□ -0.45
SLC48A1-208ENST00000551301 RPL28P46779 137 aaKnown RBP12.24□□□□□ -0.45
SLC48A1-208ENST00000551301 RAB5BP61020 215 aa12.24□□□□□ -0.45
SLC48A1-208ENST00000551301 HBDP02042 147 aa12.23□□□□□ -0.45
SLC48A1-208ENST00000551301 NKAPP1Q8N9T2 125 aa12.23□□□□□ -0.45
SLC48A1-208ENST00000551301 IGLC3P0DOY3 106 aa12.22□□□□□ -0.45
SLC48A1-208ENST00000551301 BCE1O60756 84 aa12.21□□□□□ -0.45
SLC48A1-208ENST00000551301 SNAPINO95295 136 aa12.21□□□□□ -0.45
SLC48A1-208ENST00000551301 APOC3P02656 99 aa12.21□□□□□ -0.45
SLC48A1-208ENST00000551301 KRTAP1-4P0C5Y4 121 aa12.21□□□□□ -0.45
SLC48A1-208ENST00000551301 C18orf32Q8TCD1 76 aa12.21□□□□□ -0.45
SLC48A1-208ENST00000551301 LRP2P98164 4655 aa12.21□□□□□ -0.46
SLC48A1-208ENST00000551301 SVBPQ8N300 66 aa12.2□□□□□ -0.46
SLC48A1-208ENST00000551301 LINC00167Q96N53 147 aa12.19□□□□□ -0.46
SLC48A1-208ENST00000551301 RPL37AP8A6NKH3 93 aa12.18□□□□□ -0.46
SLC48A1-208ENST00000551301 SFTA2Q6UW10 78 aa12.18□□□□□ -0.46
SLC48A1-208ENST00000551301 IGLV5-39A0A0G2JS06 123 aa12.17□□□□□ -0.46
SLC48A1-208ENST00000551301 GAGE10A6NGK3 116 aa12.17□□□□□ -0.46
SLC48A1-208ENST00000551301 PFN2P35080 140 aa12.17□□□□□ -0.46
SLC48A1-208ENST00000551301 IGLV5-37A0A075B6J1 123 aa12.16□□□□□ -0.46
SLC48A1-208ENST00000551301 A0A096LNJ9 63 aa12.16□□□□□ -0.46
SLC48A1-208ENST00000551301 BAGE3Q86Y29 109 aa12.16□□□□□ -0.46
SLC48A1-208ENST00000551301 ZNF22P17026 224 aaPredicted RBP12.15□□□□□ -0.46
SLC48A1-208ENST00000551301 COX17Q14061 63 aa12.15□□□□□ -0.46
SLC48A1-208ENST00000551301 PMCHL1Q16048 86 aa12.15□□□□□ -0.46
SLC48A1-208ENST00000551301 UBE2AP49459 152 aa12.14□□□□□ -0.47
SLC48A1-208ENST00000551301 TMEM170BQ5T4T1 132 aa12.14□□□□□ -0.47
SLC48A1-208ENST00000551301 URB1-AS1Q96HZ7 61 aa12.14□□□□□ -0.47
SLC48A1-208ENST00000551301 ERG28Q9UKR5 140 aa12.14□□□□□ -0.47
SLC48A1-208ENST00000551301 RPL24P83731 157 aaKnown RBP12.13□□□□□ -0.47
SLC48A1-208ENST00000551301 CRYGAP11844 174 aa12.11□□□□□ -0.47
SLC48A1-208ENST00000551301 SND1-IT1Q9HBX3 110 aa12.1□□□□□ -0.47
SLC48A1-208ENST00000551301 CHTOPQ9Y3Y2 248 aaKnown RBP12.1□□□□□ -0.47
SLC48A1-208ENST00000551301 IGKV2-28A0A075B6P5 120 aa12.09□□□□□ -0.47
SLC48A1-208ENST00000551301 C11orf86A6NJI1 115 aa12.09□□□□□ -0.47
SLC48A1-208ENST00000551301 IGKV2D-28P01615 120 aa12.09□□□□□ -0.47
SLC48A1-208ENST00000551301 CHCHD1Q96BP2 118 aaKnown RBP12.09□□□□□ -0.47
SLC48A1-208ENST00000551301 ZNF625Q96I27 306 aaPredicted RBP12.09□□□□□ -0.47
SLC48A1-208ENST00000551301 PRR4Q16378 134 aa12.07□□□□□ -0.48
SLC48A1-208ENST00000551301 TYMSOSQ8TAI1 123 aa12.06□□□□□ -0.48
SLC48A1-208ENST00000551301 IFI27L1Q96BM0 104 aa12.05□□□□□ -0.48
SLC48A1-208ENST00000551301 TRAV12-1A0A0B4J245 112 aa12.04□□□□□ -0.48
SLC48A1-208ENST00000551301 ATP6V1G1O75348 118 aa12.04□□□□□ -0.48
SLC48A1-208ENST00000551301 VPREB1P12018 145 aa12.04□□□□□ -0.48
SLC48A1-208ENST00000551301 LINC00158P58513 81 aa12.04□□□□□ -0.48
SLC48A1-208ENST00000551301 SCO1O75880 301 aa12.03□□□□□ -0.48
SLC48A1-208ENST00000551301 RNF213Q63HN8 5207 aa12.02□□□□□ -0.48
SLC48A1-208ENST00000551301 HSBP1O75506 76 aa12.02□□□□□ -0.49
SLC48A1-208ENST00000551301 FAM19A1Q7Z5A9 133 aa12.02□□□□□ -0.49
SLC48A1-208ENST00000551301 A0A087X002 238 aa12.01□□□□□ -0.49
SLC48A1-208ENST00000551301 TSPAN13O95857 204 aa12.01□□□□□ -0.49
SLC48A1-208ENST00000551301 FAM229BQ4G0N7 80 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 210.6 ms