RNA–Protein interactions for RNA: ENST00000541600.5

EPHA4-214, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 558 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-214ENST00000541600 HERC1Q15751 4861 aa4.73□□□□□ -1.65
EPHA4-214ENST00000541600 STARD9Q9P2P6 4700 aa4.73□□□□□ -1.65
EPHA4-214ENST00000541600 HECTD4Q9Y4D8 3996 aa4.73□□□□□ -1.65
EPHA4-214ENST00000541600 TMEM262E9PQX1 116 aa4.73□□□□□ -1.65
EPHA4-214ENST00000541600 PRM2P04554 102 aa4.73□□□□□ -1.65
EPHA4-214ENST00000541600 LINC00694P0DN24 101 aa4.73□□□□□ -1.65
EPHA4-214ENST00000541600 HTN1P15515 57 aa4.73□□□□□ -1.65
EPHA4-214ENST00000541600 RPL13AP40429 203 aaKnown RBP4.73□□□□□ -1.65
EPHA4-214ENST00000541600 SEC61GP60059 68 aa4.73□□□□□ -1.65
EPHA4-214ENST00000541600 CIRBPQ14011 172 aaKnown RBP4.73□□□□□ -1.65
EPHA4-214ENST00000541600 ATXN8Q156A1 80 aa4.73□□□□□ -1.65
EPHA4-214ENST00000541600 ADAMTSL4-AS1Q5T5F5 129 aa4.73□□□□□ -1.65
EPHA4-214ENST00000541600 NTM-AS1Q6ZSK4 140 aa4.73□□□□□ -1.65
EPHA4-214ENST00000541600 LINC00612Q8N6U2 182 aa4.73□□□□□ -1.65
EPHA4-214ENST00000541600 C3orf56Q8N813 242 aa4.73□□□□□ -1.65
EPHA4-214ENST00000541600 PRR26Q8N8Z3 221 aa4.73□□□□□ -1.65
EPHA4-214ENST00000541600 CARD19Q96LW7 228 aa4.73□□□□□ -1.65
EPHA4-214ENST00000541600 CDC42SE2Q9NRR3 84 aa4.73□□□□□ -1.65
EPHA4-214ENST00000541600 CDKN2A-AS1Q9UH64 79 aa4.73□□□□□ -1.65
EPHA4-214ENST00000541600 SS18L2Q9UHA2 77 aa4.73□□□□□ -1.65
EPHA4-214ENST00000541600 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.72□□□□□ -1.65
EPHA4-214ENST00000541600 TRGV1A0A0A0MS02 117 aa4.72□□□□□ -1.65
EPHA4-214ENST00000541600 TRAV8-3A0A0A6YYJ7 113 aa4.72□□□□□ -1.65
EPHA4-214ENST00000541600 IGKV2-29A2NJV5 120 aaPredicted RBP4.72□□□□□ -1.65
EPHA4-214ENST00000541600 F5H768 121 aa4.72□□□□□ -1.65
EPHA4-214ENST00000541600 SCGB1C2P0DMR2 95 aa4.72□□□□□ -1.65
EPHA4-214ENST00000541600 HILS1P60008 231 aa4.72□□□□□ -1.65
EPHA4-214ENST00000541600 DEFB121Q5J5C9 76 aa4.72□□□□□ -1.65
EPHA4-214ENST00000541600 CEMP1Q6PRD7 247 aaPredicted RBP4.72□□□□□ -1.65
EPHA4-214ENST00000541600 KIR2DL5BQ8NHK3 375 aa4.72□□□□□ -1.65
EPHA4-214ENST00000541600 DEFB104AQ8WTQ1 72 aa4.72□□□□□ -1.65
EPHA4-214ENST00000541600 TRBV10-2A0A0K0K1G8 114 aa4.71□□□□□ -1.66
EPHA4-214ENST00000541600 SMIM9A6NGZ8 99 aa4.71□□□□□ -1.66
EPHA4-214ENST00000541600 SMIM1B2RUZ4 78 aa4.71□□□□□ -1.66
EPHA4-214ENST00000541600 H3BT86 120 aa4.71□□□□□ -1.66
EPHA4-214ENST00000541600 SLC25A20O43772 301 aa4.71□□□□□ -1.66
EPHA4-214ENST00000541600 COX6CP09669 75 aa4.71□□□□□ -1.66
EPHA4-214ENST00000541600 COX6A2Q02221 97 aa4.71□□□□□ -1.66
EPHA4-214ENST00000541600 LINC01620Q4KN68 170 aa4.71□□□□□ -1.66
EPHA4-214ENST00000541600 C5orf47Q569G3 176 aa4.71□□□□□ -1.66
EPHA4-214ENST00000541600 Q6Q795 121 aa4.71□□□□□ -1.66
EPHA4-214ENST00000541600 Q6ZTI0 123 aa4.71□□□□□ -1.66
EPHA4-214ENST00000541600 LINC01561Q8N1V8 128 aa4.71□□□□□ -1.66
EPHA4-214ENST00000541600 ANKRD29Q8N6D5 301 aa4.71□□□□□ -1.66
EPHA4-214ENST00000541600 ZNF625Q96I27 306 aaPredicted RBP4.71□□□□□ -1.66
EPHA4-214ENST00000541600 TMEM243Q9BU79 118 aa4.71□□□□□ -1.66
EPHA4-214ENST00000541600 NOTCH3Q9UM47 2321 aa4.71□□□□□ -1.66
EPHA4-214ENST00000541600 IGLV5-37A0A075B6J1 123 aa4.7□□□□□ -1.66
EPHA4-214ENST00000541600 PRSS2P07478 247 aa4.7□□□□□ -1.66
EPHA4-214ENST00000541600 SPINK8P0C7L1 97 aa4.7□□□□□ -1.66
EPHA4-214ENST00000541600 INSL3P51460 131 aa4.7□□□□□ -1.66
EPHA4-214ENST00000541600 FHL2Q14192 279 aa4.7□□□□□ -1.66
EPHA4-214ENST00000541600 SFTA2Q6UW10 78 aa4.7□□□□□ -1.66
EPHA4-214ENST00000541600 LINC00308Q8TCZ7 52 aa4.7□□□□□ -1.66
EPHA4-214ENST00000541600 KRTAP4-8Q9BYQ9 185 aa4.7□□□□□ -1.66
EPHA4-214ENST00000541600 ICOSQ9Y6W8 199 aa4.7□□□□□ -1.66
EPHA4-214ENST00000541600 IGHV3-64A0A075B6Q5 118 aa4.69□□□□□ -1.66
EPHA4-214ENST00000541600 IGHV3-38A0A0C4DH36 116 aa4.69□□□□□ -1.66
EPHA4-214ENST00000541600 LST1O00453 97 aa4.69□□□□□ -1.66
EPHA4-214ENST00000541600 MRPL23Q16540 153 aaKnown RBP4.69□□□□□ -1.66
EPHA4-214ENST00000541600 FAM222AQ5U5X8 452 aa4.69□□□□□ -1.66
EPHA4-214ENST00000541600 ANAPC13Q9BS18 74 aa4.69□□□□□ -1.66
EPHA4-214ENST00000541600 NOP10Q9NPE3 64 aaKnown RBP4.69□□□□□ -1.66
EPHA4-214ENST00000541600 HUWE1Q7Z6Z7 4374 aaKnown RBP4.68□□□□□ -1.66
EPHA4-214ENST00000541600 A0A1B0GUV1 79 aa4.68□□□□□ -1.66
EPHA4-214ENST00000541600 C9JAW5 83 aa4.68□□□□□ -1.66
EPHA4-214ENST00000541600 MT-ATP8P03928 68 aa4.68□□□□□ -1.66
EPHA4-214ENST00000541600 RNASE13Q5GAN3 156 aaKnown RBP4.68□□□□□ -1.66
EPHA4-214ENST00000541600 C6orf226Q5I0X4 101 aa4.68□□□□□ -1.66
EPHA4-214ENST00000541600 TRBV6-8A0A0A6YYG3 113 aa4.67□□□□□ -1.66
EPHA4-214ENST00000541600 IGHV3OR16-9A0A0B4J2B5 98 aa4.67□□□□□ -1.66
EPHA4-214ENST00000541600 FAM240AA0A1B0GVK7 77 aa4.67□□□□□ -1.66
EPHA4-214ENST00000541600 PRB2P02812 416 aaPredicted RBP4.67□□□□□ -1.66
EPHA4-214ENST00000541600 XGP55808 180 aa4.67□□□□□ -1.66
EPHA4-214ENST00000541600 SMIM20Q8N5G0 67 aa4.67□□□□□ -1.66
EPHA4-214ENST00000541600 TMEM126AQ9H061 195 aa4.67□□□□□ -1.66
EPHA4-214ENST00000541600 DNAH10Q8IVF4 4471 aa4.66□□□□□ -1.66
EPHA4-214ENST00000541600 TRGV2A0A075B6R0 118 aa4.66□□□□□ -1.66
EPHA4-214ENST00000541600 A0A087WZ39 114 aa4.66□□□□□ -1.66
EPHA4-214ENST00000541600 COX7A2LO14548 114 aa4.66□□□□□ -1.66
EPHA4-214ENST00000541600 UBE2L6O14933 153 aa4.66□□□□□ -1.66
EPHA4-214ENST00000541600 TRACP01848 142 aa4.66□□□□□ -1.66
EPHA4-214ENST00000541600 Q1RN00 199 aa4.66□□□□□ -1.66
EPHA4-214ENST00000541600 Q8N1X5 172 aa4.66□□□□□ -1.66
EPHA4-214ENST00000541600 TRAV13-2A0A0B4J235 113 aa4.65□□□□□ -1.67
EPHA4-214ENST00000541600 TRAV13-1A0A0B4J241 112 aa4.65□□□□□ -1.67
EPHA4-214ENST00000541600 TRGV4A0A0C4DH28 118 aa4.65□□□□□ -1.67
EPHA4-214ENST00000541600 LYRM9A8MSI8 78 aa4.65□□□□□ -1.67
EPHA4-214ENST00000541600 IBA57-AS1B1ANH7 110 aa4.65□□□□□ -1.67
EPHA4-214ENST00000541600 RPL28P46779 137 aaKnown RBP4.65□□□□□ -1.67
EPHA4-214ENST00000541600 SOSTDC1Q6X4U4 206 aa4.65□□□□□ -1.67
EPHA4-214ENST00000541600 COX7B2Q8TF08 81 aa4.65□□□□□ -1.67
EPHA4-214ENST00000541600 H7C2G1 150 aa4.64□□□□□ -1.67
EPHA4-214ENST00000541600 ACYP1P07311 99 aa4.64□□□□□ -1.67
EPHA4-214ENST00000541600 RPL35AP18077 110 aaKnown RBP4.64□□□□□ -1.67
EPHA4-214ENST00000541600 NDUFV3P56181 108 aaKnown RBP4.64□□□□□ -1.67
EPHA4-214ENST00000541600 KRTAP10-3P60369 221 aa4.64□□□□□ -1.67
EPHA4-214ENST00000541600 MEIG1Q5JSS6 88 aa4.64□□□□□ -1.67
EPHA4-214ENST00000541600 C2orf82Q6UX34 121 aa4.64□□□□□ -1.67
EPHA4-214ENST00000541600 NTN5Q8WTR8 489 aaPredicted RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms