RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 XAGE1AQ9HD64 81 aa6.99□□□□□ -1.29
PHC1-208ENST00000540574 SOSTDC1Q6X4U4 206 aa6.98□□□□□ -1.29
PHC1-208ENST00000540574 SPATA25Q9BR10 227 aa6.98□□□□□ -1.29
PHC1-208ENST00000540574 SS18L2Q9UHA2 77 aa6.98□□□□□ -1.29
PHC1-208ENST00000540574 SPART-AS1P0CW21 52 aa6.98□□□□□ -1.29
PHC1-208ENST00000540574 REG3AQ06141 175 aa6.98□□□□□ -1.29
PHC1-208ENST00000540574 CHCHD10Q8WYQ3 142 aaPredicted RBP6.98□□□□□ -1.29
PHC1-208ENST00000540574 TENM4Q6N022 2769 aa6.98□□□□□ -1.29
PHC1-208ENST00000540574 ZNF561-AS1K7EIQ3 104 aa6.98□□□□□ -1.29
PHC1-208ENST00000540574 LST1O00453 97 aa6.98□□□□□ -1.29
PHC1-208ENST00000540574 KRTAP1-3Q8IUG1 177 aa6.98□□□□□ -1.29
PHC1-208ENST00000540574 RETNQ9HD89 108 aa6.98□□□□□ -1.29
PHC1-208ENST00000540574 CCL18P55774 89 aa6.97□□□□□ -1.29
PHC1-208ENST00000540574 CDIP1Q9H305 208 aa6.97□□□□□ -1.29
PHC1-208ENST00000540574 H3BT86 120 aa6.97□□□□□ -1.29
PHC1-208ENST00000540574 VWFP04275 2813 aa6.97□□□□□ -1.29
PHC1-208ENST00000540574 FHL3Q13643 280 aa6.97□□□□□ -1.29
PHC1-208ENST00000540574 CLUHP3Q96NS8 147 aa6.97□□□□□ -1.29
PHC1-208ENST00000540574 SPAG11BQ08648 103 aa6.96□□□□□ -1.29
PHC1-208ENST00000540574 NSD1Q96L73 2696 aaPredicted RBP6.96□□□□□ -1.3
PHC1-208ENST00000540574 IGKV2D-24A0A075B6R9 120 aa6.96□□□□□ -1.3
PHC1-208ENST00000540574 RPL18AQ02543 176 aaKnown RBP6.96□□□□□ -1.3
PHC1-208ENST00000540574 MRPL23Q16540 153 aaKnown RBP6.96□□□□□ -1.3
PHC1-208ENST00000540574 SMIM11BQ8TCY0 68 aa6.96□□□□□ -1.3
PHC1-208ENST00000540574 SPATA3Q8NHX4 192 aa6.96□□□□□ -1.3
PHC1-208ENST00000540574 FAM236AA0A1B0GUQ0 79 aa6.95□□□□□ -1.3
PHC1-208ENST00000540574 FAM236BA0A1B0GV22 79 aa6.95□□□□□ -1.3
PHC1-208ENST00000540574 LITAFQ99732 161 aa6.95□□□□□ -1.3
PHC1-208ENST00000540574 GIG44P09565 113 aaPredicted RBP6.95□□□□□ -1.3
PHC1-208ENST00000540574 A8MTW9 85 aa6.94□□□□□ -1.3
PHC1-208ENST00000540574 LINC00337Q8N6G1 96 aa6.94□□□□□ -1.3
PHC1-208ENST00000540574 INAFM2P0DMQ5 153 aa6.94□□□□□ -1.3
PHC1-208ENST00000540574 C6orf223Q8N319 242 aa6.94□□□□□ -1.3
PHC1-208ENST00000540574 CELA1Q9UNI1 258 aa6.93□□□□□ -1.3
PHC1-208ENST00000540574 IGHV4-30-4P0DP06 118 aa6.93□□□□□ -1.3
PHC1-208ENST00000540574 FAM104AQ969W3 186 aa6.93□□□□□ -1.3
PHC1-208ENST00000540574 A0A087WYN8 130 aa6.92□□□□□ -1.3
PHC1-208ENST00000540574 CAMK2N2Q96S95 79 aa6.92□□□□□ -1.3
PHC1-208ENST00000540574 TENM1Q9UKZ4 2725 aa6.92□□□□□ -1.3
PHC1-208ENST00000540574 HAMPP81172 84 aa6.92□□□□□ -1.3
PHC1-208ENST00000540574 UNQ6190/PRO20217Q6UXQ8 127 aa6.92□□□□□ -1.3
PHC1-208ENST00000540574 BAHCC1Q9P281 2608 aa6.92□□□□□ -1.3
PHC1-208ENST00000540574 TIMM17BO60830 172 aa6.92□□□□□ -1.3
PHC1-208ENST00000540574 C6orf99Q4VX62 202 aa6.92□□□□□ -1.3
PHC1-208ENST00000540574 SDIM1Q6ZPB5 146 aa6.92□□□□□ -1.3
PHC1-208ENST00000540574 ORMDL1Q9P0S3 153 aa6.92□□□□□ -1.3
PHC1-208ENST00000540574 FAM218AQ96MZ4 157 aa6.91□□□□□ -1.3
PHC1-208ENST00000540574 IGLV5-39A0A0G2JS06 123 aa6.91□□□□□ -1.3
PHC1-208ENST00000540574 DEFB105AQ8NG35 78 aa6.91□□□□□ -1.3
PHC1-208ENST00000540574 DPH3Q96FX2 82 aa6.91□□□□□ -1.3
PHC1-208ENST00000540574 IBA57-AS1B1ANH7 110 aa6.91□□□□□ -1.3
PHC1-208ENST00000540574 IGHV3OR16-9A0A0B4J2B5 98 aa6.9□□□□□ -1.3
PHC1-208ENST00000540574 KRTAP10-3P60369 221 aa6.9□□□□□ -1.3
PHC1-208ENST00000540574 NDUFV3P56181 108 aaKnown RBP6.9□□□□□ -1.3
PHC1-208ENST00000540574 A0A087WZ39 114 aa6.9□□□□□ -1.31
PHC1-208ENST00000540574 CSDC2Q9Y534 153 aaKnown RBP6.9□□□□□ -1.31
PHC1-208ENST00000540574 PDZD2O15018 2839 aa6.9□□□□□ -1.31
PHC1-208ENST00000540574 OTOGQ6ZRI0 2925 aa6.89□□□□□ -1.31
PHC1-208ENST00000540574 H0YGX0 51 aa6.89□□□□□ -1.31
PHC1-208ENST00000540574 C16orf95Q9H693 158 aa6.89□□□□□ -1.31
PHC1-208ENST00000540574 PLAC8L1A1L4L8 177 aa6.89□□□□□ -1.31
PHC1-208ENST00000540574 LYRM9A8MSI8 78 aa6.88□□□□□ -1.31
PHC1-208ENST00000540574 C9orf153Q5TBE3 101 aa6.88□□□□□ -1.31
PHC1-208ENST00000540574 OVOL2Q9BRP0 275 aa6.88□□□□□ -1.31
PHC1-208ENST00000540574 C1orf43Q9BWL3 253 aa6.88□□□□□ -1.31
PHC1-208ENST00000540574 C19orf73Q9NVV2 129 aa6.88□□□□□ -1.31
PHC1-208ENST00000540574 FBN1P35555 2871 aaKnown RBP6.88□□□□□ -1.31
PHC1-208ENST00000540574 CCDC179H3BU77 68 aa6.88□□□□□ -1.31
PHC1-208ENST00000540574 KRTAP1-1Q07627 177 aa6.88□□□□□ -1.31
PHC1-208ENST00000540574 X6R8D5 127 aa6.88□□□□□ -1.31
PHC1-208ENST00000540574 TMEM126AQ9H061 195 aa6.87□□□□□ -1.31
PHC1-208ENST00000540574 CD164L2Q6UWJ8 174 aa6.87□□□□□ -1.31
PHC1-208ENST00000540574 CSNK1G2-AS1Q8NCQ2 148 aa6.87□□□□□ -1.31
PHC1-208ENST00000540574 IGLV5-45A0A087WSX0 123 aa6.87□□□□□ -1.31
PHC1-208ENST00000540574 SMIM9A6NGZ8 99 aa6.87□□□□□ -1.31
PHC1-208ENST00000540574 CYSRT1A8MQ03 144 aa6.87□□□□□ -1.31
PHC1-208ENST00000540574 WFDC9Q8NEX5 89 aa6.87□□□□□ -1.31
PHC1-208ENST00000540574 KIR2DL5BQ8NHK3 375 aa6.86□□□□□ -1.31
PHC1-208ENST00000540574 KPRPQ5T749 579 aaPredicted RBP6.86□□□□□ -1.31
PHC1-208ENST00000540574 TRACP01848 142 aa6.86□□□□□ -1.31
PHC1-208ENST00000540574 NANOS2P60321 138 aaKnown RBP6.86□□□□□ -1.31
PHC1-208ENST00000540574 Q6ZTC4 211 aa6.86□□□□□ -1.31
PHC1-208ENST00000540574 ZNF469Q96JG9 3925 aaPredicted RBP6.85□□□□□ -1.31
PHC1-208ENST00000540574 SBSPONQ8IVN8 264 aa6.85□□□□□ -1.31
PHC1-208ENST00000540574 A0A087WVE0 104 aa6.84□□□□□ -1.31
PHC1-208ENST00000540574 C10orf25Q5T742 122 aa6.84□□□□□ -1.31
PHC1-208ENST00000540574 WFDC10BQ8IUB3 73 aa6.84□□□□□ -1.31
PHC1-208ENST00000540574 IGKV2-28A0A075B6P5 120 aa6.84□□□□□ -1.31
PHC1-208ENST00000540574 IGKV2D-28P01615 120 aa6.84□□□□□ -1.31
PHC1-208ENST00000540574 MIFP14174 115 aa6.84□□□□□ -1.31
PHC1-208ENST00000540574 CXCL5P42830 114 aa6.84□□□□□ -1.31
PHC1-208ENST00000540574 SMIM20Q8N5G0 67 aa6.84□□□□□ -1.31
PHC1-208ENST00000540574 SCXQ7RTU7 201 aa6.84□□□□□ -1.31
PHC1-208ENST00000540574 NKAPP1Q8N9T2 125 aa6.84□□□□□ -1.31
PHC1-208ENST00000540574 DEFB131BA0A096LNP1 70 aa6.83□□□□□ -1.32
PHC1-208ENST00000540574 Q8IZM0 81 aa6.83□□□□□ -1.32
PHC1-208ENST00000540574 UBL5Q9BZL1 73 aa6.83□□□□□ -1.32
PHC1-208ENST00000540574 A0A1B0GX51 115 aa6.83□□□□□ -1.32
PHC1-208ENST00000540574 RPL28P46779 137 aaKnown RBP6.83□□□□□ -1.32
PHC1-208ENST00000540574 DSCR8Q96T75 97 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms