RNA–Protein interactions for RNA: ENST00000526874.5

CTR9-203, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene CTR9, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-203ENST00000526874 GDF5OSQ5U4N7 250 aa2.24□□□□□ -2.05
CTR9-203ENST00000526874 ZNF563Q8TA94 476 aa2.24□□□□□ -2.05
CTR9-203ENST00000526874 PPP1R1CQ8WVI7 109 aa2.24□□□□□ -2.05
CTR9-203ENST00000526874 Q96NJ1 140 aa2.24□□□□□ -2.05
CTR9-203ENST00000526874 SNURFQ9Y675 71 aa2.24□□□□□ -2.05
CTR9-203ENST00000526874 MKI67P46013 3256 aaKnown RBP2.24□□□□□ -2.05
CTR9-203ENST00000526874 MYO7BQ6PIF6 2116 aa2.24□□□□□ -2.05
CTR9-203ENST00000526874 GCC2Q8IWJ2 1684 aa2.24□□□□□ -2.05
CTR9-203ENST00000526874 SDK1Q7Z5N4 2213 aa2.23□□□□□ -2.05
CTR9-203ENST00000526874 XRN1Q8IZH2 1706 aaKnown RBP2.23□□□□□ -2.05
CTR9-203ENST00000526874 ZNF292O60281 2723 aa2.23□□□□□ -2.05
CTR9-203ENST00000526874 SPTBN5Q9NRC6 3674 aaKnown RBP2.23□□□□□ -2.05
CTR9-203ENST00000526874 IQCF6A8MYZ5 107 aa2.23□□□□□ -2.05
CTR9-203ENST00000526874 M0R3E3 92 aa2.23□□□□□ -2.05
CTR9-203ENST00000526874 HMGN2P05204 90 aaKnown RBP2.23□□□□□ -2.05
CTR9-203ENST00000526874 SAA2P0DJI9 122 aaPredicted RBP2.23□□□□□ -2.05
CTR9-203ENST00000526874 WFDC6Q9BQY6 131 aa2.23□□□□□ -2.05
CTR9-203ENST00000526874 LINC01558Q9Y6Z2 57 aa2.23□□□□□ -2.05
CTR9-203ENST00000526874 R4GMQ9 66 aa2.23□□□□□ -2.05
CTR9-203ENST00000526874 CICQ96RK0 1608 aaPredicted RBP2.23□□□□□ -2.05
CTR9-203ENST00000526874 PRUNE2Q8WUY3 3088 aa2.23□□□□□ -2.05
CTR9-203ENST00000526874 CDC42BPGQ6DT37 1551 aa2.23□□□□□ -2.05
CTR9-203ENST00000526874 NCOR1O75376 2440 aa2.22□□□□□ -2.05
CTR9-203ENST00000526874 TULP4Q9NRJ4 1543 aa2.22□□□□□ -2.05
CTR9-203ENST00000526874 MED13LQ71F56 2210 aa2.22□□□□□ -2.05
CTR9-203ENST00000526874 MYO18BQ8IUG5 2567 aa2.22□□□□□ -2.05
CTR9-203ENST00000526874 ATP7BP35670 1465 aa2.22□□□□□ -2.05
CTR9-203ENST00000526874 KRTAP10-10P60014 251 aa2.22□□□□□ -2.05
CTR9-203ENST00000526874 HEPN1Q6WQI6 88 aa2.22□□□□□ -2.05
CTR9-203ENST00000526874 AMELXQ99217 191 aa2.22□□□□□ -2.05
CTR9-203ENST00000526874 PRR15LQ9BU68 103 aa2.22□□□□□ -2.05
CTR9-203ENST00000526874 SIPA1L3O60292 1781 aaPredicted RBP2.22□□□□□ -2.05
CTR9-203ENST00000526874 CFAP54Q96N23 3096 aa2.22□□□□□ -2.05
CTR9-203ENST00000526874 RANBP2P49792 3224 aaKnown RBP2.22□□□□□ -2.05
CTR9-203ENST00000526874 EYSQ5T1H1 3165 aa2.22□□□□□ -2.05
CTR9-203ENST00000526874 LAMA4Q16363 1823 aa2.21□□□□□ -2.05
CTR9-203ENST00000526874 ZNF236Q9UL36 1845 aa2.21□□□□□ -2.05
CTR9-203ENST00000526874 GCN1Q92616 2671 aaKnown RBP2.21□□□□□ -2.06
CTR9-203ENST00000526874 C7orf77A4D0Y5 90 aa2.21□□□□□ -2.06
CTR9-203ENST00000526874 ACYP1P07311 99 aa2.21□□□□□ -2.06
CTR9-203ENST00000526874 RGPD1P0DJD0 1748 aa2.21□□□□□ -2.06
CTR9-203ENST00000526874 SPINT3P49223 89 aa2.21□□□□□ -2.06
CTR9-203ENST00000526874 FDCSPQ8NFU4 85 aa2.21□□□□□ -2.06
CTR9-203ENST00000526874 CCL19Q99731 98 aa2.21□□□□□ -2.06
CTR9-203ENST00000526874 CEP250Q9BV73 2442 aa2.21□□□□□ -2.06
CTR9-203ENST00000526874 BTAF1O14981 1849 aa2.21□□□□□ -2.06
CTR9-203ENST00000526874 COL5A1P20908 1838 aaPredicted RBP2.21□□□□□ -2.06
CTR9-203ENST00000526874 BRCA2P51587 3418 aa2.21□□□□□ -2.06
CTR9-203ENST00000526874 TRGV1A0A0A0MS02 117 aa2.2□□□□□ -2.06
CTR9-203ENST00000526874 J3QRE1 110 aa2.2□□□□□ -2.06
CTR9-203ENST00000526874 IGKV4-1P06312 121 aa2.2□□□□□ -2.06
CTR9-203ENST00000526874 ARMS2P0C7Q2 107 aa2.2□□□□□ -2.06
CTR9-203ENST00000526874 DEFB103AP81534 67 aa2.2□□□□□ -2.06
CTR9-203ENST00000526874 LCE1CQ5T751 118 aa2.2□□□□□ -2.06
CTR9-203ENST00000526874 LCE1BQ5T7P3 118 aa2.2□□□□□ -2.06
CTR9-203ENST00000526874 PROK2Q9HC23 129 aa2.2□□□□□ -2.06
CTR9-203ENST00000526874 ACACBO00763 2458 aa2.2□□□□□ -2.06
CTR9-203ENST00000526874 KCPQ6ZWJ8 1503 aa2.2□□□□□ -2.06
CTR9-203ENST00000526874 MYO9AB2RTY4 2548 aa2.2□□□□□ -2.06
CTR9-203ENST00000526874 CTXND1A0A1B0GTU2 59 aa2.19□□□□□ -2.06
CTR9-203ENST00000526874 BAGE2Q86Y30 109 aa2.19□□□□□ -2.06
CTR9-203ENST00000526874 LAMC1P11047 1609 aa2.19□□□□□ -2.06
CTR9-203ENST00000526874 NUP188Q5SRE5 1749 aa2.19□□□□□ -2.06
CTR9-203ENST00000526874 SPTBN2O15020 2390 aa2.18□□□□□ -2.06
CTR9-203ENST00000526874 FAM208BQ5VWN6 2430 aa2.18□□□□□ -2.06
CTR9-203ENST00000526874 NCOR2Q9Y618 2525 aa2.18□□□□□ -2.06
CTR9-203ENST00000526874 USP32Q8NFA0 1604 aa2.18□□□□□ -2.06
CTR9-203ENST00000526874 ABCA1O95477 2261 aa2.18□□□□□ -2.06
CTR9-203ENST00000526874 ZNF137PP52743 207 aa2.18□□□□□ -2.06
CTR9-203ENST00000526874 CAV3P56539 151 aa2.18□□□□□ -2.06
CTR9-203ENST00000526874 Q6ZQY7 126 aa2.18□□□□□ -2.06
CTR9-203ENST00000526874 CD163L1Q9NR16 1453 aa2.18□□□□□ -2.06
CTR9-203ENST00000526874 C5orf42Q9H799 3197 aa2.18□□□□□ -2.06
CTR9-203ENST00000526874 KDM3BQ7LBC6 1761 aa2.18□□□□□ -2.06
CTR9-203ENST00000526874 FMN2Q9NZ56 1722 aa2.17□□□□□ -2.06
CTR9-203ENST00000526874 A0A087WVE0 104 aa2.17□□□□□ -2.06
CTR9-203ENST00000526874 TRAV1-2A0A0B4J238 106 aa2.17□□□□□ -2.06
CTR9-203ENST00000526874 MYMXA0A1B0GTQ4 84 aa2.17□□□□□ -2.06
CTR9-203ENST00000526874 A0A1B0GWA3 101 aa2.17□□□□□ -2.06
CTR9-203ENST00000526874 UQCR11O14957 56 aa2.17□□□□□ -2.06
CTR9-203ENST00000526874 PCOTHQ58A44 107 aa2.17□□□□□ -2.06
CTR9-203ENST00000526874 UNQ6190/PRO20217Q6UXQ8 127 aa2.17□□□□□ -2.06
CTR9-203ENST00000526874 BAGE3Q86Y29 109 aa2.17□□□□□ -2.06
CTR9-203ENST00000526874 KIF1AQ12756 1690 aa2.17□□□□□ -2.06
CTR9-203ENST00000526874 RGPD2P0DJD1 1756 aa2.17□□□□□ -2.06
CTR9-203ENST00000526874 NCOA6Q14686 2063 aaPredicted RBP2.17□□□□□ -2.06
CTR9-203ENST00000526874 HECTD1Q9ULT8 2610 aa2.17□□□□□ -2.06
CTR9-203ENST00000526874 ZFYVE26Q68DK2 2539 aa2.17□□□□□ -2.06
CTR9-203ENST00000526874 DNAH12Q6ZR08 3092 aa2.16□□□□□ -2.06
CTR9-203ENST00000526874 KALRNO60229 2985 aa2.16□□□□□ -2.06
CTR9-203ENST00000526874 ASH1LQ9NR48 2969 aaKnown RBP2.16□□□□□ -2.06
CTR9-203ENST00000526874 ZFHX3Q15911 3703 aa2.16□□□□□ -2.06
CTR9-203ENST00000526874 MUC3AQ02505 3323 aa2.16□□□□□ -2.06
CTR9-203ENST00000526874 BPTFQ12830 3046 aa2.16□□□□□ -2.06
CTR9-203ENST00000526874 LEPROTL1O95214 131 aa2.16□□□□□ -2.06
CTR9-203ENST00000526874 SMIM13P0DJ93 91 aa2.16□□□□□ -2.06
CTR9-203ENST00000526874 SMIM5Q71RC9 77 aa2.16□□□□□ -2.06
CTR9-203ENST00000526874 MAP1BP46821 2468 aaKnown RBP2.16□□□□□ -2.06
CTR9-203ENST00000526874 KNDC1Q76NI1 1749 aa2.16□□□□□ -2.06
CTR9-203ENST00000526874 NFAT5O94916 1531 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 180.1 ms