RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 PDZD2O15018 2839 aa1.96□□□□□ -2.1
PVT1-202ENST00000512617 FBN3Q75N90 2809 aa1.96□□□□□ -2.1
PVT1-202ENST00000512617 EXPH5Q8NEV8 1989 aa1.96□□□□□ -2.1
PVT1-202ENST00000512617 SPTBN1Q01082 2364 aaKnown RBP1.95□□□□□ -2.1
PVT1-202ENST00000512617 NUP214P35658 2090 aaPredicted RBP1.95□□□□□ -2.1
PVT1-202ENST00000512617 OTOGQ6ZRI0 2925 aa1.95□□□□□ -2.1
PVT1-202ENST00000512617 TRBV7-3A0A075B6L6 115 aa1.95□□□□□ -2.1
PVT1-202ENST00000512617 BCE1O60756 84 aa1.95□□□□□ -2.1
PVT1-202ENST00000512617 ACYP1P07311 99 aa1.95□□□□□ -2.1
PVT1-202ENST00000512617 IFI6P09912 130 aa1.95□□□□□ -2.1
PVT1-202ENST00000512617 COX6B1P14854 86 aa1.95□□□□□ -2.1
PVT1-202ENST00000512617 CNBPP62633 177 aaKnown RBP1.95□□□□□ -2.1
PVT1-202ENST00000512617 MOBPQ13875 183 aa1.95□□□□□ -2.1
PVT1-202ENST00000512617 CSAG1Q6PB30 78 aa1.95□□□□□ -2.1
PVT1-202ENST00000512617 ZNF818PQ6ZRF7 136 aa1.95□□□□□ -2.1
PVT1-202ENST00000512617 C18orf32Q8TCD1 76 aa1.95□□□□□ -2.1
PVT1-202ENST00000512617 DMAC1Q96GE9 116 aa1.95□□□□□ -2.1
PVT1-202ENST00000512617 FAM167A-AS1Q96KT0 104 aa1.95□□□□□ -2.1
PVT1-202ENST00000512617 ORMDL1Q9P0S3 153 aa1.95□□□□□ -2.1
PVT1-202ENST00000512617 KIAA1549Q9HCM3 1950 aa1.95□□□□□ -2.1
PVT1-202ENST00000512617 MYO9AB2RTY4 2548 aa1.95□□□□□ -2.1
PVT1-202ENST00000512617 CELSR2Q9HCU4 2923 aa1.95□□□□□ -2.1
PVT1-202ENST00000512617 CNTRLQ7Z7A1 2325 aa1.95□□□□□ -2.1
PVT1-202ENST00000512617 CACNA1CQ13936 2221 aa1.94□□□□□ -2.1
PVT1-202ENST00000512617 DIDO1Q9BTC0 2240 aaKnown RBP1.94□□□□□ -2.1
PVT1-202ENST00000512617 AGRNO00468 2067 aa1.94□□□□□ -2.1
PVT1-202ENST00000512617 CRYBG3Q68DQ2 2970 aa1.94□□□□□ -2.1
PVT1-202ENST00000512617 CACNA1DQ01668 2161 aa1.94□□□□□ -2.1
PVT1-202ENST00000512617 IGLV4-60A0A075B6I1 120 aa1.94□□□□□ -2.1
PVT1-202ENST00000512617 A0A087WXM4 84 aa1.94□□□□□ -2.1
PVT1-202ENST00000512617 IGLV3-32A0A0A0MS00 114 aa1.94□□□□□ -2.1
PVT1-202ENST00000512617 TEX49A0A1B0GTD5 131 aa1.94□□□□□ -2.1
PVT1-202ENST00000512617 F2Z2F3 143 aa1.94□□□□□ -2.1
PVT1-202ENST00000512617 CHKB-CPT1BH3BT56 60 aa1.94□□□□□ -2.1
PVT1-202ENST00000512617 H7BZZ5 65 aa1.94□□□□□ -2.1
PVT1-202ENST00000512617 COX6CP09669 75 aa1.94□□□□□ -2.1
PVT1-202ENST00000512617 EDDM3BP56851 147 aa1.94□□□□□ -2.1
PVT1-202ENST00000512617 DSCR10P59022 87 aa1.94□□□□□ -2.1
PVT1-202ENST00000512617 Q8N6K4 173 aa1.94□□□□□ -2.1
PVT1-202ENST00000512617 Q8N9L7 120 aa1.94□□□□□ -2.1
PVT1-202ENST00000512617 CYSTM1Q9H1C7 97 aa1.94□□□□□ -2.1
PVT1-202ENST00000512617 MRPL36Q9P0J6 103 aaKnown RBP1.94□□□□□ -2.1
PVT1-202ENST00000512617 PRO0461Q9UI25 63 aa1.94□□□□□ -2.1
PVT1-202ENST00000512617 ZNF469Q96JG9 3925 aaPredicted RBP1.94□□□□□ -2.1
PVT1-202ENST00000512617 UTP20O75691 2785 aaKnown RBP1.94□□□□□ -2.1
PVT1-202ENST00000512617 MYO7BQ6PIF6 2116 aa1.94□□□□□ -2.1
PVT1-202ENST00000512617 ARHGAP21Q5T5U3 1957 aa1.94□□□□□ -2.1
PVT1-202ENST00000512617 APCP25054 2843 aa1.94□□□□□ -2.1
PVT1-202ENST00000512617 ITPR2Q14571 2701 aa1.93□□□□□ -2.1
PVT1-202ENST00000512617 CELSR1Q9NYQ6 3014 aa1.93□□□□□ -2.1
PVT1-202ENST00000512617 TRAV22A0A0B4J277 110 aa1.93□□□□□ -2.1
PVT1-202ENST00000512617 UBE2D1P51668 147 aa1.93□□□□□ -2.1
PVT1-202ENST00000512617 UBE2D3P61077 147 aa1.93□□□□□ -2.1
PVT1-202ENST00000512617 UBE2D2P62837 147 aa1.93□□□□□ -2.1
PVT1-202ENST00000512617 KRTAP21-3Q3LHN1 58 aa1.93□□□□□ -2.1
PVT1-202ENST00000512617 VMO1Q7Z5L0 202 aa1.93□□□□□ -2.1
PVT1-202ENST00000512617 LINC00643Q86TS7 51 aa1.93□□□□□ -2.1
PVT1-202ENST00000512617 ODF3Q96PU9 254 aa1.93□□□□□ -2.1
PVT1-202ENST00000512617 LIMD2Q9BT23 127 aa1.93□□□□□ -2.1
PVT1-202ENST00000512617 PRRC2AP48634 2157 aaKnown RBP1.93□□□□□ -2.1
PVT1-202ENST00000512617 PKDREJQ9NTG1 2253 aa1.93□□□□□ -2.1
PVT1-202ENST00000512617 NOTCH2Q04721 2471 aa1.93□□□□□ -2.1
PVT1-202ENST00000512617 CHD3Q12873 2000 aaKnown RBP1.93□□□□□ -2.1
PVT1-202ENST00000512617 DCHS2Q6V1P9 2916 aa1.93□□□□□ -2.1
PVT1-202ENST00000512617 C2CD3Q4AC94 2353 aa1.92□□□□□ -2.1
PVT1-202ENST00000512617 RP1L1Q8IWN7 2480 aaPredicted RBP1.92□□□□□ -2.1
PVT1-202ENST00000512617 ANK3Q12955 4377 aaKnown RBP1.92□□□□□ -2.1
PVT1-202ENST00000512617 IGKV2D-24A0A075B6R9 120 aa1.92□□□□□ -2.1
PVT1-202ENST00000512617 TRBV6-8A0A0A6YYG3 113 aa1.92□□□□□ -2.1
PVT1-202ENST00000512617 NUPR2A6NF83 97 aa1.92□□□□□ -2.1
PVT1-202ENST00000512617 SDHAF1A6NFY7 115 aa1.92□□□□□ -2.1
PVT1-202ENST00000512617 DEFB108AA8MXU0 73 aa1.92□□□□□ -2.1
PVT1-202ENST00000512617 SMIM13P0DJ93 91 aa1.92□□□□□ -2.1
PVT1-202ENST00000512617 HOXB6P17509 224 aaKnown RBP1.92□□□□□ -2.1
PVT1-202ENST00000512617 RPL38P63173 70 aaKnown RBP1.92□□□□□ -2.1
PVT1-202ENST00000512617 KLKP1Q107X0 134 aa1.92□□□□□ -2.1
PVT1-202ENST00000512617 TMEM170BQ5T4T1 132 aa1.92□□□□□ -2.1
PVT1-202ENST00000512617 CFAP126Q5VTH2 177 aa1.92□□□□□ -2.1
PVT1-202ENST00000512617 SFTA2Q6UW10 78 aa1.92□□□□□ -2.1
PVT1-202ENST00000512617 LINC01600Q96MT4 127 aa1.92□□□□□ -2.1
PVT1-202ENST00000512617 DNAJC13O75165 2243 aa1.92□□□□□ -2.1
PVT1-202ENST00000512617 PCNX1Q96RV3 2341 aa1.92□□□□□ -2.1
PVT1-202ENST00000512617 MALRD1Q5VYJ5 2156 aa1.92□□□□□ -2.1
PVT1-202ENST00000512617 F8P00451 2351 aa1.92□□□□□ -2.1
PVT1-202ENST00000512617 LRBAP50851 2863 aa1.92□□□□□ -2.1
PVT1-202ENST00000512617 HEATR5AQ86XA9 2040 aa1.91□□□□□ -2.1
PVT1-202ENST00000512617 MED12Q93074 2177 aa1.91□□□□□ -2.1
PVT1-202ENST00000512617 NINQ8N4C6 2090 aa1.91□□□□□ -2.1
PVT1-202ENST00000512617 A0A0J9YY99 117 aa1.91□□□□□ -2.1
PVT1-202ENST00000512617 HMGN2P05204 90 aaKnown RBP1.91□□□□□ -2.1
PVT1-202ENST00000512617 EFNA4P52798 201 aa1.91□□□□□ -2.1
PVT1-202ENST00000512617 KRTAP1-1Q07627 177 aa1.91□□□□□ -2.1
PVT1-202ENST00000512617 Q5VV11 94 aa1.91□□□□□ -2.1
PVT1-202ENST00000512617 XAF1Q6GPH4 301 aa1.91□□□□□ -2.1
PVT1-202ENST00000512617 FAM223AQ8IWN6 122 aa1.91□□□□□ -2.1
PVT1-202ENST00000512617 BPESC1Q9GZL8 116 aa1.91□□□□□ -2.1
PVT1-202ENST00000512617 PRRC2CQ9Y520 2896 aaKnown RBP1.91□□□□□ -2.1
PVT1-202ENST00000512617 INTS1Q8N201 2190 aaKnown RBP1.91□□□□□ -2.1
PVT1-202ENST00000512617 HIVEP1P15822 2718 aa1.9□□□□□ -2.1
PVT1-202ENST00000512617 CREBBPQ92793 2442 aa1.9□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms