RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 SPRR4Q96PI1 79 aa1.47□□□□□ -2.17
VPS36-206ENST00000497149 MRC1P22897 1456 aa1.47□□□□□ -2.17
VPS36-206ENST00000497149 UBR3Q6ZT12 1888 aa1.47□□□□□ -2.17
VPS36-206ENST00000497149 ABCA6Q8N139 1617 aa1.47□□□□□ -2.17
VPS36-206ENST00000497149 XRN1Q8IZH2 1706 aaKnown RBP1.46□□□□□ -2.18
VPS36-206ENST00000497149 COL4A5P29400 1685 aa1.46□□□□□ -2.18
VPS36-206ENST00000497149 PREX1Q8TCU6 1659 aa1.46□□□□□ -2.18
VPS36-206ENST00000497149 TRBV7-4A0A0J9YYF1 115 aa1.46□□□□□ -2.18
VPS36-206ENST00000497149 NBDYA0A0U1RRE5 68 aa1.46□□□□□ -2.18
VPS36-206ENST00000497149 CAV3P56539 151 aa1.46□□□□□ -2.18
VPS36-206ENST00000497149 GDF5OSQ5U4N7 250 aa1.46□□□□□ -2.18
VPS36-206ENST00000497149 SPATA8Q6RVD6 105 aa1.46□□□□□ -2.18
VPS36-206ENST00000497149 C5orf56Q8N8D9 126 aa1.46□□□□□ -2.18
VPS36-206ENST00000497149 LINC00208Q96KT6 92 aa1.46□□□□□ -2.18
VPS36-206ENST00000497149 ABCA1O95477 2261 aa1.46□□□□□ -2.18
VPS36-206ENST00000497149 TSC2P49815 1807 aa1.45□□□□□ -2.18
VPS36-206ENST00000497149 HELZ2Q9BYK8 2649 aaKnown RBP1.45□□□□□ -2.18
VPS36-206ENST00000497149 AHCTF1Q8WYP5 2266 aa1.45□□□□□ -2.18
VPS36-206ENST00000497149 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.45□□□□□ -2.18
VPS36-206ENST00000497149 A0A087WVE0 104 aa1.45□□□□□ -2.18
VPS36-206ENST00000497149 TRBV30A0A0K0K1B3 111 aa1.45□□□□□ -2.18
VPS36-206ENST00000497149 LINC01549A6NIU2 74 aa1.45□□□□□ -2.18
VPS36-206ENST00000497149 H0Y9P7 68 aa1.45□□□□□ -2.18
VPS36-206ENST00000497149 IFI6P09912 130 aa1.45□□□□□ -2.18
VPS36-206ENST00000497149 DEFB107AQ8IZN7 70 aa1.45□□□□□ -2.18
VPS36-206ENST00000497149 TOMM5Q8N4H5 51 aa1.45□□□□□ -2.18
VPS36-206ENST00000497149 FDCSPQ8NFU4 85 aa1.45□□□□□ -2.18
VPS36-206ENST00000497149 TNCP24821 2201 aa1.45□□□□□ -2.18
VPS36-206ENST00000497149 CACNA1CQ13936 2221 aa1.45□□□□□ -2.18
VPS36-206ENST00000497149 ANKRD50Q9ULJ7 1429 aa1.45□□□□□ -2.18
VPS36-206ENST00000497149 LOC285556D6RIA3 1793 aa1.44□□□□□ -2.18
VPS36-206ENST00000497149 RNF17Q9BXT8 1623 aaKnown RBP1.44□□□□□ -2.18
VPS36-206ENST00000497149 TRGV1A0A0A0MS02 117 aa1.44□□□□□ -2.18
VPS36-206ENST00000497149 S100A3P33764 101 aa1.44□□□□□ -2.18
VPS36-206ENST00000497149 Q6ZQY7 126 aa1.44□□□□□ -2.18
VPS36-206ENST00000497149 GOLGA4Q13439 2230 aaKnown RBP1.44□□□□□ -2.18
VPS36-206ENST00000497149 CLASP1Q7Z460 1538 aa1.44□□□□□ -2.18
VPS36-206ENST00000497149 RALGAPBQ86X10 1494 aa1.43□□□□□ -2.18
VPS36-206ENST00000497149 PRXQ9BXM0 1461 aa1.43□□□□□ -2.18
VPS36-206ENST00000497149 CRYBG1Q9Y4K1 1723 aa1.43□□□□□ -2.18
VPS36-206ENST00000497149 RP1L1Q8IWN7 2480 aaPredicted RBP1.43□□□□□ -2.18
VPS36-206ENST00000497149 SHPRHQ149N8 1683 aa1.43□□□□□ -2.18
VPS36-206ENST00000497149 PLCH1Q4KWH8 1693 aa1.43□□□□□ -2.18
VPS36-206ENST00000497149 CTTNBP2Q8WZ74 1663 aa1.43□□□□□ -2.18
VPS36-206ENST00000497149 RREB1Q92766 1687 aa1.43□□□□□ -2.18
VPS36-206ENST00000497149 A0A087WTM6 91 aa1.43□□□□□ -2.18
VPS36-206ENST00000497149 TRAV1-2A0A0B4J238 106 aa1.43□□□□□ -2.18
VPS36-206ENST00000497149 ARL14EPLP0DKL9 152 aa1.43□□□□□ -2.18
VPS36-206ENST00000497149 ACYP2P14621 99 aa1.43□□□□□ -2.18
VPS36-206ENST00000497149 C10orf113Q5VZT2 155 aa1.43□□□□□ -2.18
VPS36-206ENST00000497149 PLAC8Q9NZF1 115 aa1.43□□□□□ -2.18
VPS36-206ENST00000497149 ATP7BP35670 1465 aa1.43□□□□□ -2.18
VPS36-206ENST00000497149 CD163L1Q9NR16 1453 aa1.43□□□□□ -2.18
VPS36-206ENST00000497149 CDC42BPGQ6DT37 1551 aa1.42□□□□□ -2.18
VPS36-206ENST00000497149 CFAP43Q8NDM7 1665 aa1.42□□□□□ -2.18
VPS36-206ENST00000497149 LAMC1P11047 1609 aa1.42□□□□□ -2.18
VPS36-206ENST00000497149 USP32Q8NFA0 1604 aa1.42□□□□□ -2.18
VPS36-206ENST00000497149 RAPGEF6Q8TEU7 1601 aa1.42□□□□□ -2.18
VPS36-206ENST00000497149 TRAV21A0A0B4J279 112 aa1.42□□□□□ -2.18
VPS36-206ENST00000497149 PRH1P02810 166 aa1.42□□□□□ -2.18
VPS36-206ENST00000497149 ANGP03950 147 aaKnown RBP1.42□□□□□ -2.18
VPS36-206ENST00000497149 WFDC9Q8NEX5 89 aa1.42□□□□□ -2.18
VPS36-206ENST00000497149 Q96NJ1 140 aa1.42□□□□□ -2.18
VPS36-206ENST00000497149 UBL5Q9BZL1 73 aa1.42□□□□□ -2.18
VPS36-206ENST00000497149 ADGRB2O60241 1585 aa1.42□□□□□ -2.18
VPS36-206ENST00000497149 GLI2P10070 1586 aa1.42□□□□□ -2.18
VPS36-206ENST00000497149 F5P12259 2224 aa1.42□□□□□ -2.18
VPS36-206ENST00000497149 KNTC1P50748 2209 aa1.42□□□□□ -2.18
VPS36-206ENST00000497149 FBN3Q75N90 2809 aa1.41□□□□□ -2.18
VPS36-206ENST00000497149 PIK3C2BO00750 1634 aa1.41□□□□□ -2.18
VPS36-206ENST00000497149 TRBV6-1A0A0K0K1D8 114 aa1.41□□□□□ -2.18
VPS36-206ENST00000497149 FCER1GP30273 86 aa1.41□□□□□ -2.18
VPS36-206ENST00000497149 SERF2P84101 59 aa1.41□□□□□ -2.18
VPS36-206ENST00000497149 NREPQ16612 68 aa1.41□□□□□ -2.18
VPS36-206ENST00000497149 DEFB112Q30KQ8 113 aa1.41□□□□□ -2.18
VPS36-206ENST00000497149 GAFA1Q96PS6 74 aa1.41□□□□□ -2.18
VPS36-206ENST00000497149 CCL19Q99731 98 aa1.41□□□□□ -2.18
VPS36-206ENST00000497149 ARHGEF5Q12774 1597 aa1.41□□□□□ -2.18
VPS36-206ENST00000497149 DIP2AQ14689 1571 aa1.41□□□□□ -2.18
VPS36-206ENST00000497149 NHSQ6T4R5 1651 aa1.41□□□□□ -2.18
VPS36-206ENST00000497149 ALS2Q96Q42 1657 aa1.41□□□□□ -2.18
VPS36-206ENST00000497149 URB1O60287 2271 aaKnown RBP1.41□□□□□ -2.18
VPS36-206ENST00000497149 FLG2Q5D862 2391 aaPredicted RBP1.41□□□□□ -2.18
VPS36-206ENST00000497149 PAPPAQ13219 1627 aa1.4□□□□□ -2.18
VPS36-206ENST00000497149 KIF1AQ12756 1690 aa1.4□□□□□ -2.19
VPS36-206ENST00000497149 MAST1Q9Y2H9 1570 aa1.4□□□□□ -2.19
VPS36-206ENST00000497149 PIN1P1O15428 100 aa1.4□□□□□ -2.19
VPS36-206ENST00000497149 LYNX1P0DP58 116 aa1.4□□□□□ -2.19
VPS36-206ENST00000497149 SPINK7P58062 85 aa1.4□□□□□ -2.19
VPS36-206ENST00000497149 C10orf99Q6UWK7 81 aa1.4□□□□□ -2.19
VPS36-206ENST00000497149 PLAC4Q8WY50 150 aa1.4□□□□□ -2.19
VPS36-206ENST00000497149 NMES1Q9C002 83 aa1.4□□□□□ -2.19
VPS36-206ENST00000497149 LINC00472Q9H8W2 130 aa1.4□□□□□ -2.19
VPS36-206ENST00000497149 CPS1P31327 1500 aa1.4□□□□□ -2.19
VPS36-206ENST00000497149 UGGT1Q9NYU2 1555 aa1.39□□□□□ -2.19
VPS36-206ENST00000497149 NCR3O14931 201 aa1.39□□□□□ -2.19
VPS36-206ENST00000497149 SPINK13Q1W4C9 94 aa1.39□□□□□ -2.19
VPS36-206ENST00000497149 NCBP2-AS2Q69YL0 99 aa1.39□□□□□ -2.19
VPS36-206ENST00000497149 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.39□□□□□ -2.19
VPS36-206ENST00000497149 SMIM11BQ8TCY0 68 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms