RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 AEBP2Q6ZN18 517 aaPredicted RBP24.17■■□□□ 1.46
VPS36-206ENST00000497149 CHIC1Q5VXU3 224 aa23.16■■□□□ 1.3
VPS36-206ENST00000497149 SENP3Q9H4L4 574 aaPredicted RBP20.72■□□□□ 0.91
VPS36-206ENST00000497149 PHF23Q9BUL5 403 aaPredicted RBP20.37■□□□□ 0.85
VPS36-206ENST00000497149 FOXD1Q16676 465 aa19.19■□□□□ 0.66
VPS36-206ENST00000497149 PLPPR3Q6T4P5 718 aa18.62■□□□□ 0.57
VPS36-206ENST00000497149 MSH5O43196 834 aa18.04■□□□□ 0.48
VPS36-206ENST00000497149 PPP6R1Q9UPN7 881 aa17.98■□□□□ 0.47
VPS36-206ENST00000497149 PIAS4Q8N2W9 510 aaPredicted RBP17.96■□□□□ 0.47
VPS36-206ENST00000497149 ADRA2BP18089 450 aa17.91■□□□□ 0.46
VPS36-206ENST00000497149 POTEDQ86YR6 584 aa17.28■□□□□ 0.36
VPS36-206ENST00000497149 SCAF1Q9H7N4 1312 aaKnown RBP16.57■□□□□ 0.24
VPS36-206ENST00000497149 PPP4R3CPQ6ZMV5 832 aa16.45■□□□□ 0.22
VPS36-206ENST00000497149 DMRT2Q9Y5R5 561 aa16.45■□□□□ 0.22
VPS36-206ENST00000497149 KCNA4P22459 653 aa16.41■□□□□ 0.22
VPS36-206ENST00000497149 MAPK8IP2Q13387 824 aaPredicted RBP16.38■□□□□ 0.21
VPS36-206ENST00000497149 NCBP3Q53F19 620 aaKnown RBP16.1■□□□□ 0.17
VPS36-206ENST00000497149 CNKSR2Q8WXI2 1034 aa15.97■□□□□ 0.15
VPS36-206ENST00000497149 HOXD11P31277 338 aaPredicted RBP15.91■□□□□ 0.14
VPS36-206ENST00000497149 NPM3O75607 178 aaKnown RBP15.87■□□□□ 0.13
VPS36-206ENST00000497149 RNF216Q9NWF9 866 aaPredicted RBP15.82■□□□□ 0.12
VPS36-206ENST00000497149 SLC4A1APQ9BWU0 796 aaKnown RBP15.68■□□□□ 0.1
VPS36-206ENST00000497149 EHMT2Q96KQ7 1210 aa15.57■□□□□ 0.08
VPS36-206ENST00000497149 DCAF8L1A6NGE4 600 aa15.56■□□□□ 0.08
VPS36-206ENST00000497149 DNAJC5BQ9UF47 199 aa15.51■□□□□ 0.07
VPS36-206ENST00000497149 RNF39Q9H2S5 420 aa15.37■□□□□ 0.05
VPS36-206ENST00000497149 CACNB1Q02641 598 aaPredicted RBP15.28■□□□□ 0.04
VPS36-206ENST00000497149 CSRNP3Q8WYN3 585 aa15.28■□□□□ 0.04
VPS36-206ENST00000497149 C1QBPQ07021 282 aaKnown RBP15.2■□□□□ 0.02
VPS36-206ENST00000497149 ZBTB22O15209 634 aa15.11■□□□□ 0.01
VPS36-206ENST00000497149 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.04■□□□□ -0
VPS36-206ENST00000497149 FOXD4L1Q9NU39 408 aa15□□□□□ -0.01
VPS36-206ENST00000497149 SLC4A2P04920 1241 aa14.92□□□□□ -0.02
VPS36-206ENST00000497149 U3KPZ7 1027 aaPredicted RBP14.77□□□□□ -0.05
VPS36-206ENST00000497149 MYCNP04198 464 aaPredicted RBP14.64□□□□□ -0.07
VPS36-206ENST00000497149 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.53□□□□□ -0.08
VPS36-206ENST00000497149 HNRNPUL2Q1KMD3 747 aaKnown RBP14.53□□□□□ -0.08
VPS36-206ENST00000497149 APLP2Q06481 763 aa14.52□□□□□ -0.09
VPS36-206ENST00000497149 ATXN8OSP0DMR3 200 aa14.47□□□□□ -0.09
VPS36-206ENST00000497149 SPINK5Q9NQ38 1064 aaPredicted RBP14.44□□□□□ -0.1
VPS36-206ENST00000497149 CAPN15O75808 1086 aa14.42□□□□□ -0.1
VPS36-206ENST00000497149 SAMD1Q6SPF0 538 aaPredicted RBP14.41□□□□□ -0.1
VPS36-206ENST00000497149 DSG3P32926 999 aa14.39□□□□□ -0.11
VPS36-206ENST00000497149 ZNF219Q9P2Y4 722 aaPredicted RBP14.34□□□□□ -0.11
VPS36-206ENST00000497149 ATF5Q9Y2D1 282 aaPredicted RBP14.26□□□□□ -0.13
VPS36-206ENST00000497149 TRHP20396 242 aaPredicted RBP14.19□□□□□ -0.14
VPS36-206ENST00000497149 ABCB7O75027 752 aa14.04□□□□□ -0.16
VPS36-206ENST00000497149 POLA2Q14181 598 aa13.89□□□□□ -0.19
VPS36-206ENST00000497149 RBM42Q9BTD8 480 aaKnown RBP13.82□□□□□ -0.2
VPS36-206ENST00000497149 ZBTB12Q9Y330 459 aaPredicted RBP13.8□□□□□ -0.2
VPS36-206ENST00000497149 FKBP8Q14318 412 aa13.77□□□□□ -0.21
VPS36-206ENST00000497149 MKRN4PQ13434 485 aaPredicted RBP13.65□□□□□ -0.22
VPS36-206ENST00000497149 FBLN2P98095 1184 aa13.62□□□□□ -0.23
VPS36-206ENST00000497149 POTEHQ6S545 545 aa13.58□□□□□ -0.24
VPS36-206ENST00000497149 AKT1S1Q96B36 256 aa13.5□□□□□ -0.25
VPS36-206ENST00000497149 SPDYE4A6NLX3 237 aa13.48□□□□□ -0.25
VPS36-206ENST00000497149 OSCARQ8IYS5 282 aa13.44□□□□□ -0.26
VPS36-206ENST00000497149 CHRDL2Q6WN34 429 aa13.38□□□□□ -0.27
VPS36-206ENST00000497149 SPDYE2BA6NHP3 402 aa13.33□□□□□ -0.28
VPS36-206ENST00000497149 SPDYE6P0CI01 402 aa13.33□□□□□ -0.28
VPS36-206ENST00000497149 SPDYE2Q495Y8 402 aa13.33□□□□□ -0.28
VPS36-206ENST00000497149 REM2Q8IYK8 340 aaPredicted RBP13.31□□□□□ -0.28
VPS36-206ENST00000497149 PROM2Q8N271 834 aa13.31□□□□□ -0.28
VPS36-206ENST00000497149 ZNF692Q9BU19 519 aaPredicted RBP13.21□□□□□ -0.29
VPS36-206ENST00000497149 FBXO3Q9UK99 471 aa13.21□□□□□ -0.29
VPS36-206ENST00000497149 SSUH2Q9Y2M2 353 aa13.17□□□□□ -0.3
VPS36-206ENST00000497149 PITPNM1O00562 1244 aa13.14□□□□□ -0.31
VPS36-206ENST00000497149 AMER1Q5JTC6 1135 aaPredicted RBP13.08□□□□□ -0.32
VPS36-206ENST00000497149 FXR2P51116 673 aaKnown RBP eCLIP13.07□□□□□ -0.32
VPS36-206ENST00000497149 PIP4P2Q8N4L2 257 aa13.07□□□□□ -0.32
VPS36-206ENST00000497149 RTN4Q9NQC3 1192 aaKnown RBP13.06□□□□□ -0.32
VPS36-206ENST00000497149 PABPN1Q86U42 306 aaKnown RBP eCLIP13.04□□□□□ -0.32
VPS36-206ENST00000497149 SPDYE1Q8NFV5 336 aaPredicted RBP13.04□□□□□ -0.32
VPS36-206ENST00000497149 VASPP50552 380 aaPredicted RBP13.01□□□□□ -0.33
VPS36-206ENST00000497149 STAG3Q9UJ98 1225 aa12.92□□□□□ -0.34
VPS36-206ENST00000497149 IFNLR1Q8IU57 520 aaPredicted RBP12.88□□□□□ -0.35
VPS36-206ENST00000497149 CLEC11AQ9Y240 323 aa12.85□□□□□ -0.35
VPS36-206ENST00000497149 SP7Q8TDD2 431 aaPredicted RBP12.82□□□□□ -0.36
VPS36-206ENST00000497149 PRKAR2AP13861 404 aaKnown RBP12.78□□□□□ -0.36
VPS36-206ENST00000497149 MIER1Q8N108 512 aa12.76□□□□□ -0.37
VPS36-206ENST00000497149 PLCD3Q8N3E9 789 aa12.76□□□□□ -0.37
VPS36-206ENST00000497149 HAX1O00165 279 aa12.75□□□□□ -0.37
VPS36-206ENST00000497149 PRR29P0C7W0 189 aa12.74□□□□□ -0.37
VPS36-206ENST00000497149 KLHL34Q8N239 644 aa12.73□□□□□ -0.37
VPS36-206ENST00000497149 SPOCK2Q92563 424 aa12.67□□□□□ -0.38
VPS36-206ENST00000497149 PLEKHG5O94827 1062 aa12.65□□□□□ -0.38
VPS36-206ENST00000497149 C19orf67A6NJJ6 358 aa12.64□□□□□ -0.39
VPS36-206ENST00000497149 ZBTB47Q9UFB7 747 aaPredicted RBP12.6□□□□□ -0.39
VPS36-206ENST00000497149 CHADLQ6NUI6 762 aa12.58□□□□□ -0.4
VPS36-206ENST00000497149 PKD2Q13563 968 aa12.57□□□□□ -0.4
VPS36-206ENST00000497149 EVX2Q03828 476 aa12.56□□□□□ -0.4
VPS36-206ENST00000497149 FARP1Q9Y4F1 1045 aaPredicted RBP12.53□□□□□ -0.4
VPS36-206ENST00000497149 CREBZFQ9NS37 354 aa12.52□□□□□ -0.41
VPS36-206ENST00000497149 MNX1P50219 401 aaPredicted RBP12.44□□□□□ -0.42
VPS36-206ENST00000497149 CLCN6P51797 869 aa12.44□□□□□ -0.42
VPS36-206ENST00000497149 ECM2O94769 699 aaPredicted RBP12.41□□□□□ -0.42
VPS36-206ENST00000497149 CIZ1Q9ULV3 898 aaPredicted RBP12.41□□□□□ -0.42
VPS36-206ENST00000497149 CD44P16070 742 aaKnown RBP12.4□□□□□ -0.42
VPS36-206ENST00000497149 NUBP1P53384 320 aa12.4□□□□□ -0.42
VPS36-206ENST00000497149 GABBR2O75899 941 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms