RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 CDC42SE2Q9NRR3 84 aa6.92□□□□□ -1.3
CMC1-209ENST00000477739 PYGO1Q9Y3Y4 419 aa6.92□□□□□ -1.3
CMC1-209ENST00000477739 NSD1Q96L73 2696 aaPredicted RBP6.92□□□□□ -1.3
CMC1-209ENST00000477739 H3BT86 120 aa6.92□□□□□ -1.3
CMC1-209ENST00000477739 J3QKU1 62 aa6.92□□□□□ -1.3
CMC1-209ENST00000477739 SCXQ7RTU7 201 aa6.92□□□□□ -1.3
CMC1-209ENST00000477739 XAGE1AQ9HD64 81 aa6.92□□□□□ -1.3
CMC1-209ENST00000477739 TRAV25A0A0B4J276 109 aa6.91□□□□□ -1.3
CMC1-209ENST00000477739 LOC107984640A0A0U1RRK4 108 aa6.91□□□□□ -1.3
CMC1-209ENST00000477739 CCL18P55774 89 aa6.91□□□□□ -1.3
CMC1-209ENST00000477739 HAMPP81172 84 aa6.91□□□□□ -1.3
CMC1-209ENST00000477739 TRAV23DV6A0A075B6W5 121 aa6.9□□□□□ -1.3
CMC1-209ENST00000477739 A0A1B0GX51 115 aa6.9□□□□□ -1.3
CMC1-209ENST00000477739 hADV29S1A0JD25 119 aa6.9□□□□□ -1.3
CMC1-209ENST00000477739 SMCR5Q8TEV8 140 aa6.9□□□□□ -1.3
CMC1-209ENST00000477739 SPANXDQ9BXN6 97 aa6.9□□□□□ -1.3
CMC1-209ENST00000477739 SPANXCQ9NY87 97 aa6.9□□□□□ -1.3
CMC1-209ENST00000477739 AKAP9Q99996 3911 aa6.9□□□□□ -1.3
CMC1-209ENST00000477739 KRTAP1-3Q8IUG1 177 aa6.9□□□□□ -1.3
CMC1-209ENST00000477739 PKD1L1Q8TDX9 2849 aa6.9□□□□□ -1.31
CMC1-209ENST00000477739 CITED1Q99966 193 aa6.89□□□□□ -1.31
CMC1-209ENST00000477739 CXCL5P42830 114 aa6.89□□□□□ -1.31
CMC1-209ENST00000477739 SS18Q15532 418 aa6.88□□□□□ -1.31
CMC1-209ENST00000477739 KLK12Q9UKR0 248 aa6.88□□□□□ -1.31
CMC1-209ENST00000477739 PRB2P02812 416 aaPredicted RBP6.88□□□□□ -1.31
CMC1-209ENST00000477739 CMC4P56277 68 aaPredicted RBP6.88□□□□□ -1.31
CMC1-209ENST00000477739 HILS1P60008 231 aa6.88□□□□□ -1.31
CMC1-209ENST00000477739 FAM222AQ5U5X8 452 aa6.88□□□□□ -1.31
CMC1-209ENST00000477739 C6orf223Q8N319 242 aa6.88□□□□□ -1.31
CMC1-209ENST00000477739 TRAV13-2A0A0B4J235 113 aa6.88□□□□□ -1.31
CMC1-209ENST00000477739 RPL18AQ02543 176 aaKnown RBP6.88□□□□□ -1.31
CMC1-209ENST00000477739 BEAN1Q3B7T3 259 aa6.88□□□□□ -1.31
CMC1-209ENST00000477739 HIGD2BQ4VC39 106 aa6.88□□□□□ -1.31
CMC1-209ENST00000477739 SHISA2Q6UWI4 295 aa6.88□□□□□ -1.31
CMC1-209ENST00000477739 TRBV6-8A0A0A6YYG3 113 aa6.87□□□□□ -1.31
CMC1-209ENST00000477739 FAM110AQ9BQ89 295 aa6.87□□□□□ -1.31
CMC1-209ENST00000477739 SBSPONQ8IVN8 264 aa6.87□□□□□ -1.31
CMC1-209ENST00000477739 COPS9Q8WXC6 57 aa6.87□□□□□ -1.31
CMC1-209ENST00000477739 TENM4Q6N022 2769 aa6.87□□□□□ -1.31
CMC1-209ENST00000477739 C16orf74Q96GX8 76 aa6.86□□□□□ -1.31
CMC1-209ENST00000477739 TRBV10-1A0A0K0K1A3 114 aa6.86□□□□□ -1.31
CMC1-209ENST00000477739 DEFB105AQ8NG35 78 aa6.86□□□□□ -1.31
CMC1-209ENST00000477739 DAD1P61803 113 aa6.85□□□□□ -1.31
CMC1-209ENST00000477739 C6orf99Q4VX62 202 aa6.85□□□□□ -1.31
CMC1-209ENST00000477739 SPATA3Q8NHX4 192 aa6.85□□□□□ -1.31
CMC1-209ENST00000477739 INAFM1C9JVW0 142 aa6.85□□□□□ -1.31
CMC1-209ENST00000477739 LINC00846Q9NV44 126 aa6.85□□□□□ -1.31
CMC1-209ENST00000477739 OTOGQ6ZRI0 2925 aa6.84□□□□□ -1.31
CMC1-209ENST00000477739 IGKV2-28A0A075B6P5 120 aa6.84□□□□□ -1.31
CMC1-209ENST00000477739 IGKV2D-28P01615 120 aa6.84□□□□□ -1.31
CMC1-209ENST00000477739 INAFM2P0DMQ5 153 aa6.84□□□□□ -1.31
CMC1-209ENST00000477739 PPDPFQ9H3Y8 114 aa6.84□□□□□ -1.31
CMC1-209ENST00000477739 IGHV4-28A0A0C4DH34 117 aa6.84□□□□□ -1.31
CMC1-209ENST00000477739 LINC00959A0A1B0GUT2 108 aa6.84□□□□□ -1.31
CMC1-209ENST00000477739 ENHOQ6UWT2 76 aa6.84□□□□□ -1.31
CMC1-209ENST00000477739 TMEM126AQ9H061 195 aa6.83□□□□□ -1.32
CMC1-209ENST00000477739 IGLV1-51P01701 117 aa6.83□□□□□ -1.32
CMC1-209ENST00000477739 UNQ6190/PRO20217Q6UXQ8 127 aa6.83□□□□□ -1.32
CMC1-209ENST00000477739 DSCR8Q96T75 97 aa6.83□□□□□ -1.32
CMC1-209ENST00000477739 ORMDL1Q9P0S3 153 aa6.83□□□□□ -1.32
CMC1-209ENST00000477739 CHCHD10Q8WYQ3 142 aaPredicted RBP6.82□□□□□ -1.32
CMC1-209ENST00000477739 FAM19A1Q7Z5A9 133 aa6.82□□□□□ -1.32
CMC1-209ENST00000477739 LINC00643Q86TS7 51 aa6.82□□□□□ -1.32
CMC1-209ENST00000477739 FHL2Q14192 279 aa6.81□□□□□ -1.32
CMC1-209ENST00000477739 IGLV5-39A0A0G2JS06 123 aa6.81□□□□□ -1.32
CMC1-209ENST00000477739 C20orf197Q8N268 126 aa6.8□□□□□ -1.32
CMC1-209ENST00000477739 RETNQ9HD89 108 aa6.8□□□□□ -1.32
CMC1-209ENST00000477739 TRRAPQ9Y4A5 3859 aa6.8□□□□□ -1.32
CMC1-209ENST00000477739 GIG44P09565 113 aaPredicted RBP6.8□□□□□ -1.32
CMC1-209ENST00000477739 REG3AQ06141 175 aa6.8□□□□□ -1.32
CMC1-209ENST00000477739 SPAG11BQ08648 103 aa6.8□□□□□ -1.32
CMC1-209ENST00000477739 C10orf25Q5T742 122 aa6.79□□□□□ -1.32
CMC1-209ENST00000477739 KIR2DL5BQ8NHK3 375 aa6.79□□□□□ -1.32
CMC1-209ENST00000477739 TRBV6-4A0A1B0GX49 114 aa6.79□□□□□ -1.32
CMC1-209ENST00000477739 IGHV3OR16-9A0A0B4J2B5 98 aa6.78□□□□□ -1.32
CMC1-209ENST00000477739 TRACP01848 142 aa6.78□□□□□ -1.32
CMC1-209ENST00000477739 KRTAP1-1Q07627 177 aa6.78□□□□□ -1.32
CMC1-209ENST00000477739 C16orf95Q9H693 158 aa6.78□□□□□ -1.32
CMC1-209ENST00000477739 SNURFQ9Y675 71 aa6.78□□□□□ -1.32
CMC1-209ENST00000477739 TIMM17BO60830 172 aa6.78□□□□□ -1.32
CMC1-209ENST00000477739 LY6G6DO95868 133 aa6.77□□□□□ -1.33
CMC1-209ENST00000477739 GHRHP01286 108 aa6.77□□□□□ -1.33
CMC1-209ENST00000477739 Q6ZQY7 126 aa6.77□□□□□ -1.33
CMC1-209ENST00000477739 PRO0255Q9UI72 69 aa6.77□□□□□ -1.33
CMC1-209ENST00000477739 C3orf22Q8N5N4 141 aa6.76□□□□□ -1.33
CMC1-209ENST00000477739 Q8N9L7 120 aa6.76□□□□□ -1.33
CMC1-209ENST00000477739 MRAPQ8TCY5 172 aa6.76□□□□□ -1.33
CMC1-209ENST00000477739 CELA1Q9UNI1 258 aa6.76□□□□□ -1.33
CMC1-209ENST00000477739 TENM3Q9P273 2699 aa6.76□□□□□ -1.33
CMC1-209ENST00000477739 USP17L23D6RBM5 183 aa6.76□□□□□ -1.33
CMC1-209ENST00000477739 CSDC2Q9Y534 153 aaKnown RBP6.76□□□□□ -1.33
CMC1-209ENST00000477739 M0QXV9 152 aa6.76□□□□□ -1.33
CMC1-209ENST00000477739 IL17DQ8TAD2 202 aa6.76□□□□□ -1.33
CMC1-209ENST00000477739 UBL5Q9BZL1 73 aa6.76□□□□□ -1.33
CMC1-209ENST00000477739 CYSTM1Q9H1C7 97 aa6.76□□□□□ -1.33
CMC1-209ENST00000477739 IGLV5-45A0A087WSX0 123 aa6.75□□□□□ -1.33
CMC1-209ENST00000477739 ZNF561-AS1K7EIQ3 104 aa6.75□□□□□ -1.33
CMC1-209ENST00000477739 C19orf73Q9NVV2 129 aa6.75□□□□□ -1.33
CMC1-209ENST00000477739 PLAC8L1A1L4L8 177 aa6.75□□□□□ -1.33
CMC1-209ENST00000477739 IBA57-AS1B1ANH7 110 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms