RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 TAS2R45P59539 299 aa2.9□□□□□ -1.95
CKS1B-204ENST00000471245 S100A10P60903 97 aa2.9□□□□□ -1.95
CKS1B-204ENST00000471245 RAB14P61106 215 aa2.9□□□□□ -1.95
CKS1B-204ENST00000471245 UBE2L3P68036 154 aaKnown RBP2.9□□□□□ -1.95
CKS1B-204ENST00000471245 KRTAP26-1Q6PEX3 210 aa2.9□□□□□ -1.95
CKS1B-204ENST00000471245 SDIM1Q6ZPB5 146 aa2.9□□□□□ -1.95
CKS1B-204ENST00000471245 C9orf163Q8N9P6 203 aa2.9□□□□□ -1.95
CKS1B-204ENST00000471245 OR5C1Q8NGR4 320 aa2.9□□□□□ -1.95
CKS1B-204ENST00000471245 OR2T35Q8NGX2 323 aa2.9□□□□□ -1.95
CKS1B-204ENST00000471245 PRADC1Q9BSG0 188 aa2.9□□□□□ -1.95
CKS1B-204ENST00000471245 WDR61Q9GZS3 305 aaKnown RBP2.9□□□□□ -1.95
CKS1B-204ENST00000471245 OTORQ9NRC9 128 aa2.9□□□□□ -1.95
CKS1B-204ENST00000471245 A6NED7 52 aa2.89□□□□□ -1.95
CKS1B-204ENST00000471245 A8MUN3 132 aa2.89□□□□□ -1.95
CKS1B-204ENST00000471245 LST1O00453 97 aa2.89□□□□□ -1.95
CKS1B-204ENST00000471245 COX7A2LO14548 114 aa2.89□□□□□ -1.95
CKS1B-204ENST00000471245 MGST1P10620 155 aaKnown RBP2.89□□□□□ -1.95
CKS1B-204ENST00000471245 CSN1S1P47710 185 aa2.89□□□□□ -1.95
CKS1B-204ENST00000471245 TSPEAR-AS2P59090 65 aa2.89□□□□□ -1.95
CKS1B-204ENST00000471245 CIRBPQ14011 172 aaKnown RBP2.89□□□□□ -1.95
CKS1B-204ENST00000471245 TRIQKQ629K1 86 aa2.89□□□□□ -1.95
CKS1B-204ENST00000471245 ENHOQ6UWT2 76 aa2.89□□□□□ -1.95
CKS1B-204ENST00000471245 HIST1H2BAQ96A08 127 aa2.89□□□□□ -1.95
CKS1B-204ENST00000471245 ZC2HC1AQ96GY0 325 aa2.89□□□□□ -1.95
CKS1B-204ENST00000471245 CRCT1Q9UGL9 99 aa2.89□□□□□ -1.95
CKS1B-204ENST00000471245 R4GN34 69 aa2.89□□□□□ -1.95
CKS1B-204ENST00000471245 MUC17Q685J3 4493 aa2.88□□□□□ -1.95
CKS1B-204ENST00000471245 TRAV26-2A0A0B4J265 109 aa2.88□□□□□ -1.95
CKS1B-204ENST00000471245 FAM236DA0A1B0GTK5 79 aa2.88□□□□□ -1.95
CKS1B-204ENST00000471245 HMGB3O15347 200 aaKnown RBP2.88□□□□□ -1.95
CKS1B-204ENST00000471245 LYRM1O43325 122 aa2.88□□□□□ -1.95
CKS1B-204ENST00000471245 SLC25A20O43772 301 aa2.88□□□□□ -1.95
CKS1B-204ENST00000471245 PDE6DO43924 150 aa2.88□□□□□ -1.95
CKS1B-204ENST00000471245 FAM236CP0DP71 79 aa2.88□□□□□ -1.95
CKS1B-204ENST00000471245 CRIP1P50238 77 aa2.88□□□□□ -1.95
CKS1B-204ENST00000471245 KRTAP10-10P60014 251 aa2.88□□□□□ -1.95
CKS1B-204ENST00000471245 NMES1Q9C002 83 aa2.88□□□□□ -1.95
CKS1B-204ENST00000471245 A0A0B4J2C4 111 aa2.87□□□□□ -1.95
CKS1B-204ENST00000471245 TCRAP04437 139 aa2.87□□□□□ -1.95
CKS1B-204ENST00000471245 UBE2D3P61077 147 aa2.87□□□□□ -1.95
CKS1B-204ENST00000471245 UBE2D2P62837 147 aa2.87□□□□□ -1.95
CKS1B-204ENST00000471245 KHDC3LQ587J8 217 aa2.87□□□□□ -1.95
CKS1B-204ENST00000471245 AMMECR1LQ6DCA0 310 aa2.87□□□□□ -1.95
CKS1B-204ENST00000471245 SPINK6Q6UWN8 80 aa2.87□□□□□ -1.95
CKS1B-204ENST00000471245 KRTAP5-5Q701N2 237 aaPredicted RBP2.87□□□□□ -1.95
CKS1B-204ENST00000471245 LINC00304Q8N9R0 145 aa2.87□□□□□ -1.95
CKS1B-204ENST00000471245 SMIM3Q9BZL3 60 aa2.87□□□□□ -1.95
CKS1B-204ENST00000471245 A0A087WWC5 75 aa2.86□□□□□ -1.95
CKS1B-204ENST00000471245 A8MWV9 139 aa2.86□□□□□ -1.95
CKS1B-204ENST00000471245 H3BVH4 76 aa2.86□□□□□ -1.95
CKS1B-204ENST00000471245 ARL14EPLP0DKL9 152 aa2.86□□□□□ -1.95
CKS1B-204ENST00000471245 LGALSLQ3ZCW2 172 aaPredicted RBP2.86□□□□□ -1.95
CKS1B-204ENST00000471245 CMTM2Q8TAZ6 248 aa2.86□□□□□ -1.95
CKS1B-204ENST00000471245 SPACA4Q8TDM5 124 aa2.86□□□□□ -1.95
CKS1B-204ENST00000471245 DPH3Q96FX2 82 aa2.86□□□□□ -1.95
CKS1B-204ENST00000471245 RNASE7Q9H1E1 156 aaKnown RBP2.86□□□□□ -1.95
CKS1B-204ENST00000471245 SH3BGRL3Q9H299 93 aa2.86□□□□□ -1.95
CKS1B-204ENST00000471245 IL36BQ9NZH7 164 aa2.86□□□□□ -1.95
CKS1B-204ENST00000471245 HSPB11Q9Y547 144 aa2.86□□□□□ -1.95
CKS1B-204ENST00000471245 A0A087WX48 190 aa2.85□□□□□ -1.95
CKS1B-204ENST00000471245 MUC21A0A0G2JKD1 596 aa2.85□□□□□ -1.95
CKS1B-204ENST00000471245 GRIFINA4D1Z8 144 aa2.85□□□□□ -1.95
CKS1B-204ENST00000471245 CCDC160A6NGH7 325 aa2.85□□□□□ -1.95
CKS1B-204ENST00000471245 C17orf112F2Z3M2 114 aa2.85□□□□□ -1.95
CKS1B-204ENST00000471245 ARMS2P0C7Q2 107 aa2.85□□□□□ -1.95
CKS1B-204ENST00000471245 HRES1P13985 223 aa2.85□□□□□ -1.95
CKS1B-204ENST00000471245 RPS20P60866 119 aaKnown RBP2.85□□□□□ -1.95
CKS1B-204ENST00000471245 Q0VG73 95 aa2.85□□□□□ -1.95
CKS1B-204ENST00000471245 ELOBQ15370 118 aa2.85□□□□□ -1.95
CKS1B-204ENST00000471245 CLPSL2Q6UWE3 100 aa2.85□□□□□ -1.95
CKS1B-204ENST00000471245 AKAP14Q86UN6 197 aa2.85□□□□□ -1.95
CKS1B-204ENST00000471245 C5orf17Q8NAS9 161 aa2.85□□□□□ -1.95
CKS1B-204ENST00000471245 PPP1R1CQ8WVI7 109 aa2.85□□□□□ -1.95
CKS1B-204ENST00000471245 PLAC8Q9NZF1 115 aa2.85□□□□□ -1.95
CKS1B-204ENST00000471245 EPDR1Q9UM22 224 aa2.85□□□□□ -1.95
CKS1B-204ENST00000471245 TRBV6-8A0A0A6YYG3 113 aa2.84□□□□□ -1.95
CKS1B-204ENST00000471245 A0A1B0GU33 70 aa2.84□□□□□ -1.95
CKS1B-204ENST00000471245 TMEM262E9PQX1 116 aa2.84□□□□□ -1.95
CKS1B-204ENST00000471245 MPC2O95563 127 aa2.84□□□□□ -1.95
CKS1B-204ENST00000471245 IFNA1P01562 189 aa2.84□□□□□ -1.95
CKS1B-204ENST00000471245 GCHFRP30047 84 aa2.84□□□□□ -1.95
CKS1B-204ENST00000471245 CNBPP62633 177 aaKnown RBP2.84□□□□□ -1.95
CKS1B-204ENST00000471245 FAM74A4Q5TZK3 123 aa2.84□□□□□ -1.95
CKS1B-204ENST00000471245 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.84□□□□□ -1.95
CKS1B-204ENST00000471245 SMDT1Q9H4I9 107 aa2.84□□□□□ -1.95
CKS1B-204ENST00000471245 ARL2-SNX15V9GYD0 113 aa2.84□□□□□ -1.95
CKS1B-204ENST00000471245 IGLV10-54A0A075B6I4 117 aa2.83□□□□□ -1.96
CKS1B-204ENST00000471245 TRBV7-3A0A075B6L6 115 aa2.83□□□□□ -1.96
CKS1B-204ENST00000471245 IGHV3-64A0A075B6Q5 118 aa2.83□□□□□ -1.96
CKS1B-204ENST00000471245 TMSB15BA0A087X1C1 80 aa2.83□□□□□ -1.96
CKS1B-204ENST00000471245 IGKV2-24A0A0C4DH68 120 aa2.83□□□□□ -1.96
CKS1B-204ENST00000471245 TRBV10-1A0A0K0K1A3 114 aa2.83□□□□□ -1.96
CKS1B-204ENST00000471245 FABP5P3A8MUU1 101 aa2.83□□□□□ -1.96
CKS1B-204ENST00000471245 CRPP02741 224 aa2.83□□□□□ -1.96
CKS1B-204ENST00000471245 ANGP03950 147 aaKnown RBP2.83□□□□□ -1.96
CKS1B-204ENST00000471245 S100A4P26447 101 aaKnown RBP2.83□□□□□ -1.96
CKS1B-204ENST00000471245 MIAQ16674 131 aa2.83□□□□□ -1.96
CKS1B-204ENST00000471245 KRTAP25-1Q3LHN0 102 aa2.83□□□□□ -1.96
CKS1B-204ENST00000471245 FAM74A1Q5RGS3 127 aa2.83□□□□□ -1.96
CKS1B-204ENST00000471245 RASL11AQ6T310 242 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms