RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 KLK12Q9UKR0 248 aa9.24□□□□□ -0.93
UBE4B-206ENST00000466379 TCL1BO95988 128 aa9.24□□□□□ -0.93
UBE4B-206ENST00000466379 SCGB1C2P0DMR2 95 aa9.24□□□□□ -0.93
UBE4B-206ENST00000466379 NBEAL1Q6ZS30 2694 aa9.23□□□□□ -0.93
UBE4B-206ENST00000466379 WFDC2Q14508 124 aa9.23□□□□□ -0.93
UBE4B-206ENST00000466379 C6orf226Q5I0X4 101 aa9.23□□□□□ -0.93
UBE4B-206ENST00000466379 CD164L2Q6UWJ8 174 aa9.23□□□□□ -0.93
UBE4B-206ENST00000466379 WFDC10BQ8IUB3 73 aa9.23□□□□□ -0.93
UBE4B-206ENST00000466379 MDFIQ99750 246 aa9.23□□□□□ -0.93
UBE4B-206ENST00000466379 DEFB131BA0A096LNP1 70 aa9.22□□□□□ -0.93
UBE4B-206ENST00000466379 C2orf82Q6UX34 121 aa9.22□□□□□ -0.93
UBE4B-206ENST00000466379 MIR7-3HGQ8N6C7 128 aa9.22□□□□□ -0.93
UBE4B-206ENST00000466379 PFN2P35080 140 aa9.22□□□□□ -0.93
UBE4B-206ENST00000466379 LINC00158P58513 81 aa9.22□□□□□ -0.93
UBE4B-206ENST00000466379 COX7A2LO14548 114 aa9.21□□□□□ -0.93
UBE4B-206ENST00000466379 RPL13AP40429 203 aaKnown RBP9.21□□□□□ -0.93
UBE4B-206ENST00000466379 OCIAD2Q56VL3 154 aa9.21□□□□□ -0.93
UBE4B-206ENST00000466379 HUWE1Q7Z6Z7 4374 aaKnown RBP9.21□□□□□ -0.93
UBE4B-206ENST00000466379 H3BNG1 76 aa9.21□□□□□ -0.94
UBE4B-206ENST00000466379 FOXI1Q12951 378 aa9.21□□□□□ -0.94
UBE4B-206ENST00000466379 PRO0461Q9UI25 63 aa9.21□□□□□ -0.94
UBE4B-206ENST00000466379 GAGE12HA6NDE8 117 aa9.2□□□□□ -0.94
UBE4B-206ENST00000466379 TRIAP1O43715 76 aa9.2□□□□□ -0.94
UBE4B-206ENST00000466379 MALP21145 153 aa9.2□□□□□ -0.94
UBE4B-206ENST00000466379 LYRM7Q5U5X0 104 aa9.2□□□□□ -0.94
UBE4B-206ENST00000466379 ENHOQ6UWT2 76 aa9.2□□□□□ -0.94
UBE4B-206ENST00000466379 SPATA25Q9BR10 227 aa9.2□□□□□ -0.94
UBE4B-206ENST00000466379 ESRGQ1W209 222 aa9.2□□□□□ -0.94
UBE4B-206ENST00000466379 Q8IZM0 81 aa9.2□□□□□ -0.94
UBE4B-206ENST00000466379 F8W1H4 67 aa9.19□□□□□ -0.94
UBE4B-206ENST00000466379 SEC61GP60059 68 aa9.19□□□□□ -0.94
UBE4B-206ENST00000466379 TM2D3Q9BRN9 247 aa9.19□□□□□ -0.94
UBE4B-206ENST00000466379 UBE2WQ96B02 151 aa9.19□□□□□ -0.94
UBE4B-206ENST00000466379 PRR34Q9NV39 138 aa9.19□□□□□ -0.94
UBE4B-206ENST00000466379 KIAA0087Q14695 138 aa9.18□□□□□ -0.94
UBE4B-206ENST00000466379 LINC01561Q8N1V8 128 aa9.18□□□□□ -0.94
UBE4B-206ENST00000466379 MGAM2Q2M2H8 2515 aa9.17□□□□□ -0.94
UBE4B-206ENST00000466379 IBA57-AS1B1ANH7 110 aa9.17□□□□□ -0.94
UBE4B-206ENST00000466379 SMCPP49901 116 aaPredicted RBP9.17□□□□□ -0.94
UBE4B-206ENST00000466379 CKS1BP61024 79 aa9.17□□□□□ -0.94
UBE4B-206ENST00000466379 RNF151Q2KHN1 245 aa9.17□□□□□ -0.94
UBE4B-206ENST00000466379 COPS9Q8WXC6 57 aa9.17□□□□□ -0.94
UBE4B-206ENST00000466379 TRBV20-1A0A075B6N2 111 aa9.16□□□□□ -0.94
UBE4B-206ENST00000466379 TRBV30A0A0K0K1B3 111 aa9.16□□□□□ -0.94
UBE4B-206ENST00000466379 LINC00526Q96FQ7 95 aa9.16□□□□□ -0.94
UBE4B-206ENST00000466379 CRPP02741 224 aa9.16□□□□□ -0.94
UBE4B-206ENST00000466379 ETDBQ3ZM63 59 aa9.16□□□□□ -0.94
UBE4B-206ENST00000466379 CDIP1Q9H305 208 aa9.16□□□□□ -0.94
UBE4B-206ENST00000466379 CCL18P55774 89 aa9.15□□□□□ -0.94
UBE4B-206ENST00000466379 C6orf223Q8N319 242 aa9.15□□□□□ -0.94
UBE4B-206ENST00000466379 SND1-IT1Q9HBX3 110 aa9.15□□□□□ -0.94
UBE4B-206ENST00000466379 C9orf116Q5BN46 136 aaPredicted RBP9.14□□□□□ -0.95
UBE4B-206ENST00000466379 CLEC2BQ92478 149 aa9.14□□□□□ -0.95
UBE4B-206ENST00000466379 IGKV2-28A0A075B6P5 120 aa9.13□□□□□ -0.95
UBE4B-206ENST00000466379 IGKV2D-28P01615 120 aa9.13□□□□□ -0.95
UBE4B-206ENST00000466379 SPAG11BQ08648 103 aa9.13□□□□□ -0.95
UBE4B-206ENST00000466379 TRAV10A0A0B4J240 114 aa9.12□□□□□ -0.95
UBE4B-206ENST00000466379 C9JAW5 83 aa9.12□□□□□ -0.95
UBE4B-206ENST00000466379 K7ERU9 68 aa9.12□□□□□ -0.95
UBE4B-206ENST00000466379 ATXN8Q156A1 80 aa9.12□□□□□ -0.95
UBE4B-206ENST00000466379 C10orf25Q5T742 122 aa9.12□□□□□ -0.95
UBE4B-206ENST00000466379 LINC00337Q8N6G1 96 aa9.12□□□□□ -0.95
UBE4B-206ENST00000466379 PPDPFQ9H3Y8 114 aa9.11□□□□□ -0.95
UBE4B-206ENST00000466379 KLK5Q9Y337 293 aaPredicted RBP9.11□□□□□ -0.95
UBE4B-206ENST00000466379 M0QXV9 152 aa9.11□□□□□ -0.95
UBE4B-206ENST00000466379 COX6CP09669 75 aa9.11□□□□□ -0.95
UBE4B-206ENST00000466379 CXCL5P42830 114 aa9.11□□□□□ -0.95
UBE4B-206ENST00000466379 UNQ6190/PRO20217Q6UXQ8 127 aa9.11□□□□□ -0.95
UBE4B-206ENST00000466379 TRAV8-4A0A0B4J246 113 aa9.1□□□□□ -0.95
UBE4B-206ENST00000466379 LINC01620Q4KN68 170 aa9.1□□□□□ -0.95
UBE4B-206ENST00000466379 SLC25A20O43772 301 aa9.08□□□□□ -0.96
UBE4B-206ENST00000466379 KRTAP26-1Q6PEX3 210 aa9.08□□□□□ -0.96
UBE4B-206ENST00000466379 DNAH9Q9NYC9 4486 aa9.08□□□□□ -0.96
UBE4B-206ENST00000466379 TRAV13-2A0A0B4J235 113 aa9.08□□□□□ -0.96
UBE4B-206ENST00000466379 HIGD2BQ4VC39 106 aa9.08□□□□□ -0.96
UBE4B-206ENST00000466379 C5orf47Q569G3 176 aa9.08□□□□□ -0.96
UBE4B-206ENST00000466379 LINC01556Q5JQF7 62 aa9.08□□□□□ -0.96
UBE4B-206ENST00000466379 LINC00588Q9Y4M8 146 aa9.07□□□□□ -0.96
UBE4B-206ENST00000466379 PRR3P79522 188 aaKnown RBP9.07□□□□□ -0.96
UBE4B-206ENST00000466379 VPS25Q9BRG1 176 aa9.07□□□□□ -0.96
UBE4B-206ENST00000466379 LST1O00453 97 aa9.06□□□□□ -0.96
UBE4B-206ENST00000466379 ANKRD29Q8N6D5 301 aa9.06□□□□□ -0.96
UBE4B-206ENST00000466379 C15orf53Q8NAA6 179 aa9.06□□□□□ -0.96
UBE4B-206ENST00000466379 OR13C6PQ8NH95 151 aa9.06□□□□□ -0.96
UBE4B-206ENST00000466379 Q9HAA7 133 aa9.06□□□□□ -0.96
UBE4B-206ENST00000466379 IGKV2D-24A0A075B6R9 120 aa9.05□□□□□ -0.96
UBE4B-206ENST00000466379 COX17Q14061 63 aa9.05□□□□□ -0.96
UBE4B-206ENST00000466379 SMIM11BQ8TCY0 68 aa9.05□□□□□ -0.96
UBE4B-206ENST00000466379 NTN5Q8WTR8 489 aaPredicted RBP9.05□□□□□ -0.96
UBE4B-206ENST00000466379 COL7A1Q02388 2944 aa9.04□□□□□ -0.96
UBE4B-206ENST00000466379 Q8NDZ9 215 aa9.04□□□□□ -0.96
UBE4B-206ENST00000466379 CARD19Q96LW7 228 aa9.04□□□□□ -0.96
UBE4B-206ENST00000466379 TRBV10-2A0A0K0K1G8 114 aa9.03□□□□□ -0.96
UBE4B-206ENST00000466379 DNAH10OSP0CZ25 163 aa9.03□□□□□ -0.96
UBE4B-206ENST00000466379 TEN1Q86WV5 123 aa9.03□□□□□ -0.96
UBE4B-206ENST00000466379 FAM218AQ96MZ4 157 aa9.03□□□□□ -0.96
UBE4B-206ENST00000466379 C6orf48Q9UBA6 75 aa9.03□□□□□ -0.96
UBE4B-206ENST00000466379 RPL28P46779 137 aaKnown RBP9.03□□□□□ -0.96
UBE4B-206ENST00000466379 C15orf56Q8N910 161 aa9.03□□□□□ -0.96
UBE4B-206ENST00000466379 NCR3O14931 201 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 145.9 ms