RNA–Protein interactions for RNA: ENST00000453944.1

DDX59-208, Transcript of DEAD-box helicase 59, human

TSL 3

Gene DDX59, Length 643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX59-208	ENST00000453944	PMCHL1	Q16048	86 aa		0.09	□□□□□ -2.4
DDX59-208	ENST00000453944	DEFB107A	Q8IZN7	70 aa		0.09	□□□□□ -2.4
DDX59-208	ENST00000453944	TRGV9	Q99603	122 aa		0.09	□□□□□ -2.4
DDX59-208	ENST00000453944	XRN1	Q8IZH2	1706 aa	Known RBP	0.09	□□□□□ -2.4
DDX59-208	ENST00000453944	NRXN1	Q9ULB1	1477 aa		0.09	□□□□□ -2.4
DDX59-208	ENST00000453944	SYS1-DBNDD2	H3BUS1	97 aa		0.08	□□□□□ -2.4
DDX59-208	ENST00000453944		K7EQZ3	153 aa		0.08	□□□□□ -2.4
DDX59-208	ENST00000453944	UQCRH	P07919	91 aa		0.08	□□□□□ -2.4
DDX59-208	ENST00000453944	KRTAP20-1	Q3LI63	56 aa		0.08	□□□□□ -2.4
DDX59-208	ENST00000453944	SERP2	Q8N6R1	65 aa		0.08	□□□□□ -2.4
DDX59-208	ENST00000453944	DPY30	Q9C005	99 aa		0.08	□□□□□ -2.4
DDX59-208	ENST00000453944	TCHH	Q07283	1943 aa		0.08	□□□□□ -2.4
DDX59-208	ENST00000453944		A0A1B0GU69	56 aa		0.07	□□□□□ -2.4
DDX59-208	ENST00000453944	LINC00032	P0C843	101 aa		0.07	□□□□□ -2.4
DDX59-208	ENST00000453944	COL5A1-AS1	Q5SY13	56 aa		0.07	□□□□□ -2.4
DDX59-208	ENST00000453944	SPTBN2	O15020	2390 aa		0.07	□□□□□ -2.4
DDX59-208	ENST00000453944	CCDC141	Q6ZP82	1450 aa		0.07	□□□□□ -2.4
DDX59-208	ENST00000453944	SETBP1	Q9Y6X0	1596 aa		0.06	□□□□□ -2.4
DDX59-208	ENST00000453944	RYR1	P21817	5038 aa		0.06	□□□□□ -2.4
DDX59-208	ENST00000453944	HIVEP3	Q5T1R4	2406 aa		0.06	□□□□□ -2.4
DDX59-208	ENST00000453944	KIAA0556	O60303	1618 aa		0.06	□□□□□ -2.4
DDX59-208	ENST00000453944	HRNR	Q86YZ3	2850 aa	Predicted RBP	0.06	□□□□□ -2.4
DDX59-208	ENST00000453944	C6orf201	Q7Z4U5	140 aa		0.06	□□□□□ -2.4
DDX59-208	ENST00000453944	FXYD6	Q9H0Q3	95 aa		0.06	□□□□□ -2.4
DDX59-208	ENST00000453944	CHD9	Q3L8U1	2897 aa		0.06	□□□□□ -2.4
DDX59-208	ENST00000453944	VPS8	Q8N3P4	1428 aa		0.05	□□□□□ -2.4
DDX59-208	ENST00000453944		H3BQF6	201 aa		0.05	□□□□□ -2.4
DDX59-208	ENST00000453944	FAU	P35544	74 aa	Known RBP	0.05	□□□□□ -2.4
DDX59-208	ENST00000453944	ZFHX3	Q15911	3703 aa		0.04	□□□□□ -2.4
DDX59-208	ENST00000453944	LOC730098	B7Z3J9	87 aa		0.04	□□□□□ -2.4
DDX59-208	ENST00000453944		H0Y9P7	68 aa		0.04	□□□□□ -2.4
DDX59-208	ENST00000453944	S100A8	P05109	93 aa		0.04	□□□□□ -2.4
DDX59-208	ENST00000453944	SNHG12	Q9BXW3	62 aa		0.04	□□□□□ -2.4
DDX59-208	ENST00000453944	KIAA1109	Q2LD37	5005 aa		0.04	□□□□□ -2.4
DDX59-208	ENST00000453944	CACNA1A	O00555	2505 aa		0.04	□□□□□ -2.4
DDX59-208	ENST00000453944	RAPGEF2	Q9Y4G8	1499 aa		0.03	□□□□□ -2.4
DDX59-208	ENST00000453944	PTPN13	Q12923	2485 aa		0.03	□□□□□ -2.4
DDX59-208	ENST00000453944	PRM1	P04553	51 aa		0.03	□□□□□ -2.4
DDX59-208	ENST00000453944	MT4	P47944	62 aa		0.03	□□□□□ -2.4
DDX59-208	ENST00000453944	KNDC1	Q76NI1	1749 aa		0.03	□□□□□ -2.4
DDX59-208	ENST00000453944	CREBBP	Q92793	2442 aa		0.03	□□□□□ -2.41
DDX59-208	ENST00000453944	COL7A1	Q02388	2944 aa		0.03	□□□□□ -2.41
DDX59-208	ENST00000453944	CHD8	Q9HCK8	2581 aa		0.02	□□□□□ -2.41
DDX59-208	ENST00000453944	PKDREJ	Q9NTG1	2253 aa		0.02	□□□□□ -2.41
DDX59-208	ENST00000453944		A0A0G2JMZ2	1700 aa		0.02	□□□□□ -2.41
DDX59-208	ENST00000453944	SON	P18583	2426 aa	Known RBP	0.02	□□□□□ -2.41
DDX59-208	ENST00000453944	UQCRHL	A0A096LP55	91 aa		0.02	□□□□□ -2.41
DDX59-208	ENST00000453944	TRBV7-7	A0A0K0K1E9	115 aa		0.02	□□□□□ -2.41
DDX59-208	ENST00000453944	ARMS2	P0C7Q2	107 aa		0.02	□□□□□ -2.41
DDX59-208	ENST00000453944	SPRR2E	P22531	72 aa		0.02	□□□□□ -2.41
DDX59-208	ENST00000453944	SPRR2D	P22532	72 aa		0.02	□□□□□ -2.41
DDX59-208	ENST00000453944	SPRR2B	P35325	72 aa		0.02	□□□□□ -2.41
DDX59-208	ENST00000453944	SPRR2A	P35326	72 aa		0.02	□□□□□ -2.41
DDX59-208	ENST00000453944	GNGT1	P63211	74 aa		0.02	□□□□□ -2.41
DDX59-208	ENST00000453944	KLK9	Q2XQG4	91 aa		0.02	□□□□□ -2.41
DDX59-208	ENST00000453944	KRTAP19-6	Q3LI70	58 aa		0.02	□□□□□ -2.41
DDX59-208	ENST00000453944	CRIPT	Q9P021	101 aa		0.02	□□□□□ -2.41
DDX59-208	ENST00000453944	SETD2	Q9BYW2	2564 aa	Predicted RBP	0.02	□□□□□ -2.41
DDX59-208	ENST00000453944	CSMD3	Q7Z407	3707 aa		0.02	□□□□□ -2.41
DDX59-208	ENST00000453944	ABCA2	Q9BZC7	2435 aa		0.02	□□□□□ -2.41
DDX59-208	ENST00000453944	DOPEY1	Q5JWR5	2465 aa		0.02	□□□□□ -2.41
DDX59-208	ENST00000453944	HERC1	Q15751	4861 aa		0.01	□□□□□ -2.41
DDX59-208	ENST00000453944	EPPK1	P58107	5090 aa	Known RBP	0.01	□□□□□ -2.41
DDX59-208	ENST00000453944	PKD1L2	Q7Z442	2459 aa		0.01	□□□□□ -2.41
DDX59-208	ENST00000453944	PKIA	P61925	76 aa		0.01	□□□□□ -2.41
DDX59-208	ENST00000453944	KRTAP20-2	Q3LI61	65 aa		0.01	□□□□□ -2.41
DDX59-208	ENST00000453944	MARF1	Q9Y4F3	1742 aa	Known RBP	0.01	□□□□□ -2.41
DDX59-208	ENST00000453944	FAT3	Q8TDW7	4589 aa		0.01	□□□□□ -2.41
DDX59-208	ENST00000453944	SLIT1	O75093	1534 aa		0	□□□□□ -2.41
DDX59-208	ENST00000453944	NCOR1	O75376	2440 aa		0	□□□□□ -2.41
DDX59-208	ENST00000453944	SMR3B	P02814	79 aa	Predicted RBP	0	□□□□□ -2.41
DDX59-208	ENST00000453944	TARBP1	Q13395	1621 aa	Known RBP	0	□□□□□ -2.41
DDX59-208	ENST00000453944	KRTAP19-8	Q3LI54	63 aa		0	□□□□□ -2.41
DDX59-208	ENST00000453944	KRTAP6-1	Q3LI64	71 aa		0	□□□□□ -2.41
DDX59-208	ENST00000453944	LELP1	Q5T871	98 aa		0	□□□□□ -2.41
DDX59-208	ENST00000453944	ABCA13	Q86UQ4	5058 aa		0	□□□□□ -2.41
DDX59-208	ENST00000453944	SPRR2F	Q96RM1	72 aa		0	□□□□□ -2.41
DDX59-208	ENST00000453944	PSENEN	Q9NZ42	101 aa		0	□□□□□ -2.41
DDX59-208	ENST00000453944	RNF213	Q63HN8	5207 aa		-0	□□□□□ -2.41
DDX59-208	ENST00000453944	C2CD3	Q4AC94	2353 aa		-0.01	□□□□□ -2.41
DDX59-208	ENST00000453944	AKAP6	Q13023	2319 aa		-0.01	□□□□□ -2.41
DDX59-208	ENST00000453944	DOPEY2	Q9Y3R5	2298 aa		-0.01	□□□□□ -2.41
DDX59-208	ENST00000453944	PAPPA2	Q9BXP8	1791 aa		-0.01	□□□□□ -2.41
DDX59-208	ENST00000453944	HMCN2	Q8NDA2	5059 aa		-0.01	□□□□□ -2.41
DDX59-208	ENST00000453944	COL12A1	Q99715	3063 aa		-0.01	□□□□□ -2.41
DDX59-208	ENST00000453944	BPTF	Q12830	3046 aa		-0.01	□□□□□ -2.41
DDX59-208	ENST00000453944	EDC4	Q6P2E9	1401 aa	Known RBP	-0.01	□□□□□ -2.41
DDX59-208	ENST00000453944	CCNB3	Q8WWL7	1395 aa		-0.01	□□□□□ -2.41
DDX59-208	ENST00000453944	ZNF292	O60281	2723 aa		-0.01	□□□□□ -2.41
DDX59-208	ENST00000453944	NSD1	Q96L73	2696 aa	Predicted RBP	-0.01	□□□□□ -2.41
DDX59-208	ENST00000453944	STAB2	Q8WWQ8	2551 aa		-0.01	□□□□□ -2.41
DDX59-208	ENST00000453944		F8WEM9	126 aa		-0.01	□□□□□ -2.41
DDX59-208	ENST00000453944	LYNX1	G3V0Z9	82 aa		-0.01	□□□□□ -2.41
DDX59-208	ENST00000453944		M0R2T5	61 aa		-0.01	□□□□□ -2.41
DDX59-208	ENST00000453944	ETDB	Q3ZM63	59 aa		-0.01	□□□□□ -2.41
DDX59-208	ENST00000453944	EP300	Q09472	2414 aa	Predicted RBP	-0.01	□□□□□ -2.41
DDX59-208	ENST00000453944	CELSR1	Q9NYQ6	3014 aa		-0.01	□□□□□ -2.41
DDX59-208	ENST00000453944	DNHD1	Q96M86	4753 aa		-0.01	□□□□□ -2.41
DDX59-208	ENST00000453944	RYR3	Q15413	4870 aa		-0.02	□□□□□ -2.41
DDX59-208	ENST00000453944	LRP2	P98164	4655 aa		-0.02	□□□□□ -2.41

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