RNA–Protein interactions for RNA: ENST00000448587.5

TINCR-201, Transcript of TINCR ubiquitin domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TINCR, Length 3,733 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TINCR-201ENST00000448587 RETNQ9HD89 108 aa13.75□□□□□ -0.21
TINCR-201ENST00000448587 MRAPQ8TCY5 172 aa13.75□□□□□ -0.21
TINCR-201ENST00000448587 HIST1H4AP62805 103 aaKnown RBP13.74□□□□□ -0.21
TINCR-201ENST00000448587 XAGE1AQ9HD64 81 aa13.74□□□□□ -0.21
TINCR-201ENST00000448587 COPS9Q8WXC6 57 aa13.74□□□□□ -0.21
TINCR-201ENST00000448587 CCL18P55774 89 aa13.73□□□□□ -0.21
TINCR-201ENST00000448587 HIGD2BQ4VC39 106 aa13.73□□□□□ -0.21
TINCR-201ENST00000448587 SPANXDQ9BXN6 97 aa13.73□□□□□ -0.21
TINCR-201ENST00000448587 SPANXCQ9NY87 97 aa13.73□□□□□ -0.21
TINCR-201ENST00000448587 LST1O00453 97 aa13.72□□□□□ -0.21
TINCR-201ENST00000448587 FAM218AQ96MZ4 157 aa13.72□□□□□ -0.21
TINCR-201ENST00000448587 LINC00337Q8N6G1 96 aa13.72□□□□□ -0.21
TINCR-201ENST00000448587 LINC00959A0A1B0GUT2 108 aa13.71□□□□□ -0.21
TINCR-201ENST00000448587 PRO0255Q9UI72 69 aa13.71□□□□□ -0.21
TINCR-201ENST00000448587 SMIM11BQ8TCY0 68 aa13.71□□□□□ -0.22
TINCR-201ENST00000448587 COX7A2LO14548 114 aa13.7□□□□□ -0.22
TINCR-201ENST00000448587 HILS1P60008 231 aa13.7□□□□□ -0.22
TINCR-201ENST00000448587 IGHV4-28A0A0C4DH34 117 aa13.69□□□□□ -0.22
TINCR-201ENST00000448587 C6orf223Q8N319 242 aa13.69□□□□□ -0.22
TINCR-201ENST00000448587 TRBV6-4A0A1B0GX49 114 aa13.69□□□□□ -0.22
TINCR-201ENST00000448587 CMC4P56277 68 aaPredicted RBP13.69□□□□□ -0.22
TINCR-201ENST00000448587 A0A087WYN8 130 aa13.69□□□□□ -0.22
TINCR-201ENST00000448587 FAM236AA0A1B0GUQ0 79 aa13.69□□□□□ -0.22
TINCR-201ENST00000448587 FAM236BA0A1B0GV22 79 aa13.69□□□□□ -0.22
TINCR-201ENST00000448587 TRAV13-2A0A0B4J235 113 aa13.68□□□□□ -0.22
TINCR-201ENST00000448587 CHCHD10Q8WYQ3 142 aaPredicted RBP13.68□□□□□ -0.22
TINCR-201ENST00000448587 SCGB1A1P11684 91 aa13.67□□□□□ -0.22
TINCR-201ENST00000448587 LAMTOR3Q9UHA4 124 aa13.67□□□□□ -0.22
TINCR-201ENST00000448587 KRTAP10-3P60369 221 aa13.67□□□□□ -0.22
TINCR-201ENST00000448587 HERV-K104P63124 156 aa13.66□□□□□ -0.22
TINCR-201ENST00000448587 CELA1Q9UNI1 258 aa13.66□□□□□ -0.22
TINCR-201ENST00000448587 PKD1L1Q8TDX9 2849 aa13.66□□□□□ -0.22
TINCR-201ENST00000448587 REG3AQ06141 175 aa13.66□□□□□ -0.22
TINCR-201ENST00000448587 CCDC179H3BU77 68 aa13.65□□□□□ -0.22
TINCR-201ENST00000448587 RPL18AQ02543 176 aaKnown RBP13.65□□□□□ -0.22
TINCR-201ENST00000448587 DEFB121Q5J5C9 76 aa13.65□□□□□ -0.22
TINCR-201ENST00000448587 SDIM1Q6ZPB5 146 aa13.65□□□□□ -0.22
TINCR-201ENST00000448587 H3BT86 120 aa13.64□□□□□ -0.23
TINCR-201ENST00000448587 PLAC8L1A1L4L8 177 aa13.63□□□□□ -0.23
TINCR-201ENST00000448587 UNQ6190/PRO20217Q6UXQ8 127 aa13.62□□□□□ -0.23
TINCR-201ENST00000448587 WFDC9Q8NEX5 89 aa13.62□□□□□ -0.23
TINCR-201ENST00000448587 IGLV5-39A0A0G2JS06 123 aa13.61□□□□□ -0.23
TINCR-201ENST00000448587 NDUFV3P56181 108 aaKnown RBP13.61□□□□□ -0.23
TINCR-201ENST00000448587 SPAG11BQ08648 103 aa13.61□□□□□ -0.23
TINCR-201ENST00000448587 KRTAP1-1Q07627 177 aa13.6□□□□□ -0.23
TINCR-201ENST00000448587 IGHV3OR16-9A0A0B4J2B5 98 aa13.59□□□□□ -0.23
TINCR-201ENST00000448587 C9orf66Q5T8R8 295 aa13.59□□□□□ -0.23
TINCR-201ENST00000448587 C19orf73Q9NVV2 129 aa13.59□□□□□ -0.23
TINCR-201ENST00000448587 TRRAPQ9Y4A5 3859 aa13.59□□□□□ -0.23
TINCR-201ENST00000448587 C6orf99Q4VX62 202 aa13.58□□□□□ -0.24
TINCR-201ENST00000448587 APOC4P55056 127 aa13.57□□□□□ -0.24
TINCR-201ENST00000448587 IGKV2D-24A0A075B6R9 120 aa13.57□□□□□ -0.24
TINCR-201ENST00000448587 SPART-AS1P0CW21 52 aa13.56□□□□□ -0.24
TINCR-201ENST00000448587 ZNF561-AS1K7EIQ3 104 aa13.56□□□□□ -0.24
TINCR-201ENST00000448587 A0A087WVE0 104 aa13.56□□□□□ -0.24
TINCR-201ENST00000448587 IGHV4-30-4P0DP06 118 aa13.55□□□□□ -0.24
TINCR-201ENST00000448587 C9orf129Q5T035 196 aaKnown RBP13.55□□□□□ -0.24
TINCR-201ENST00000448587 IGKV2-28A0A075B6P5 120 aa13.55□□□□□ -0.24
TINCR-201ENST00000448587 IGKV2D-28P01615 120 aa13.55□□□□□ -0.24
TINCR-201ENST00000448587 CSNK1G2-AS1Q8NCQ2 148 aa13.55□□□□□ -0.24
TINCR-201ENST00000448587 TIMM17BO60830 172 aa13.54□□□□□ -0.24
TINCR-201ENST00000448587 DEFB105AQ8NG35 78 aa13.54□□□□□ -0.24
TINCR-201ENST00000448587 HAMPP81172 84 aa13.54□□□□□ -0.24
TINCR-201ENST00000448587 X6R8D5 127 aa13.54□□□□□ -0.24
TINCR-201ENST00000448587 C10orf25Q5T742 122 aa13.53□□□□□ -0.24
TINCR-201ENST00000448587 TENM3Q9P273 2699 aa13.53□□□□□ -0.24
TINCR-201ENST00000448587 A0A087WZ39 114 aa13.53□□□□□ -0.24
TINCR-201ENST00000448587 MRPL23Q16540 153 aaKnown RBP13.53□□□□□ -0.24
TINCR-201ENST00000448587 AKAP9Q99996 3911 aa13.53□□□□□ -0.24
TINCR-201ENST00000448587 IGLV5-45A0A087WSX0 123 aa13.52□□□□□ -0.24
TINCR-201ENST00000448587 SBSPONQ8IVN8 264 aa13.52□□□□□ -0.25
TINCR-201ENST00000448587 SMIM20Q8N5G0 67 aa13.52□□□□□ -0.25
TINCR-201ENST00000448587 ORMDL1Q9P0S3 153 aa13.5□□□□□ -0.25
TINCR-201ENST00000448587 IBA57-AS1B1ANH7 110 aa13.5□□□□□ -0.25
TINCR-201ENST00000448587 INAFM2P0DMQ5 153 aa13.5□□□□□ -0.25
TINCR-201ENST00000448587 CSDC2Q9Y534 153 aaKnown RBP13.5□□□□□ -0.25
TINCR-201ENST00000448587 C9orf153Q5TBE3 101 aa13.5□□□□□ -0.25
TINCR-201ENST00000448587 CAMK2N2Q96S95 79 aa13.5□□□□□ -0.25
TINCR-201ENST00000448587 SCXQ7RTU7 201 aa13.49□□□□□ -0.25
TINCR-201ENST00000448587 KMT2BQ9UMN6 2715 aaPredicted RBP13.49□□□□□ -0.25
TINCR-201ENST00000448587 CXCL5P42830 114 aa13.49□□□□□ -0.25
TINCR-201ENST00000448587 OVOL2Q9BRP0 275 aa13.49□□□□□ -0.25
TINCR-201ENST00000448587 CYSRT1A8MQ03 144 aa13.48□□□□□ -0.25
TINCR-201ENST00000448587 WFDC10BQ8IUB3 73 aa13.46□□□□□ -0.25
TINCR-201ENST00000448587 Q6ZTC4 211 aa13.45□□□□□ -0.26
TINCR-201ENST00000448587 NANOS2P60321 138 aaKnown RBP13.45□□□□□ -0.26
TINCR-201ENST00000448587 C16orf95Q9H693 158 aa13.44□□□□□ -0.26
TINCR-201ENST00000448587 IL17DQ8TAD2 202 aa13.43□□□□□ -0.26
TINCR-201ENST00000448587 TRACP01848 142 aa13.43□□□□□ -0.26
TINCR-201ENST00000448587 SHISA2Q6UWI4 295 aa13.43□□□□□ -0.26
TINCR-201ENST00000448587 CD164L2Q6UWJ8 174 aa13.43□□□□□ -0.26
TINCR-201ENST00000448587 SMCR5Q8TEV8 140 aa13.43□□□□□ -0.26
TINCR-201ENST00000448587 KLK5Q9Y337 293 aaPredicted RBP13.42□□□□□ -0.26
TINCR-201ENST00000448587 TRAV23DV6A0A075B6W5 121 aa13.42□□□□□ -0.26
TINCR-201ENST00000448587 H0YGX0 51 aa13.42□□□□□ -0.26
TINCR-201ENST00000448587 KPRPQ5T749 579 aaPredicted RBP13.41□□□□□ -0.26
TINCR-201ENST00000448587 A0A1B0GX51 115 aa13.4□□□□□ -0.26
TINCR-201ENST00000448587 TMEM126AQ9H061 195 aa13.4□□□□□ -0.26
TINCR-201ENST00000448587 STAB2Q8WWQ8 2551 aa13.4□□□□□ -0.26
TINCR-201ENST00000448587 Q6ZQY7 126 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms