RNA–Protein interactions for RNA: ENST00000447271.1

PTPN3-205, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 2

Gene PTPN3, Length 587 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-205ENST00000447271 UBE2D1P51668 147 aa4.14□□□□□ -1.75
PTPN3-205ENST00000447271 DEFB1P60022 68 aa4.14□□□□□ -1.75
PTPN3-205ENST00000447271 Q6ZQT7 251 aa4.14□□□□□ -1.75
PTPN3-205ENST00000447271 FAM19A3Q7Z5A8 133 aa4.14□□□□□ -1.75
PTPN3-205ENST00000447271 C11orf72Q8NBR9 251 aa4.14□□□□□ -1.75
PTPN3-205ENST00000447271 RNASE8Q8TDE3 154 aaKnown RBP4.14□□□□□ -1.75
PTPN3-205ENST00000447271 VSIG2Q96IQ7 327 aa4.14□□□□□ -1.75
PTPN3-205ENST00000447271 SIGMAR1Q99720 223 aa4.14□□□□□ -1.75
PTPN3-205ENST00000447271 KRTAP9-8Q9BYQ0 159 aa4.14□□□□□ -1.75
PTPN3-205ENST00000447271 SPANXCQ9NY87 97 aa4.14□□□□□ -1.75
PTPN3-205ENST00000447271 UBE2D4Q9Y2X8 147 aa4.14□□□□□ -1.75
PTPN3-205ENST00000447271 IGHV3-73A0A0B4J1V6 119 aa4.13□□□□□ -1.75
PTPN3-205ENST00000447271 TRAV13-2A0A0B4J235 113 aa4.13□□□□□ -1.75
PTPN3-205ENST00000447271 A0A0J9YXV3 536 aa4.13□□□□□ -1.75
PTPN3-205ENST00000447271 TRBV30A0A0K0K1B3 111 aa4.13□□□□□ -1.75
PTPN3-205ENST00000447271 KRTAP29-1A8MX34 341 aaPredicted RBP4.13□□□□□ -1.75
PTPN3-205ENST00000447271 APOMO95445 188 aa4.13□□□□□ -1.75
PTPN3-205ENST00000447271 IGHV3-30P01768 117 aa4.13□□□□□ -1.75
PTPN3-205ENST00000447271 IGHV3-30-5P0DP03 117 aa4.13□□□□□ -1.75
PTPN3-205ENST00000447271 ZNF22P17026 224 aaPredicted RBP4.13□□□□□ -1.75
PTPN3-205ENST00000447271 SS18Q15532 418 aa4.13□□□□□ -1.75
PTPN3-205ENST00000447271 ODF3L2Q3SX64 289 aa4.13□□□□□ -1.75
PTPN3-205ENST00000447271 MEIG1Q5JSS6 88 aa4.13□□□□□ -1.75
PTPN3-205ENST00000447271 Q5VSD8 79 aa4.13□□□□□ -1.75
PTPN3-205ENST00000447271 LINC01561Q8N1V8 128 aa4.13□□□□□ -1.75
PTPN3-205ENST00000447271 TM2D3Q9BRN9 247 aa4.13□□□□□ -1.75
PTPN3-205ENST00000447271 NOP10Q9NPE3 64 aaKnown RBP4.13□□□□□ -1.75
PTPN3-205ENST00000447271 VPS13BQ7Z7G8 4022 aa4.13□□□□□ -1.75
PTPN3-205ENST00000447271 IGLV5-45A0A087WSX0 123 aa4.12□□□□□ -1.75
PTPN3-205ENST00000447271 H3BQ85 93 aa4.12□□□□□ -1.75
PTPN3-205ENST00000447271 NDUFA1O15239 70 aa4.12□□□□□ -1.75
PTPN3-205ENST00000447271 PCP4P48539 62 aa4.12□□□□□ -1.75
PTPN3-205ENST00000447271 UBE2D3P61077 147 aa4.12□□□□□ -1.75
PTPN3-205ENST00000447271 UBE2D2P62837 147 aa4.12□□□□□ -1.75
PTPN3-205ENST00000447271 FHL2Q14192 279 aa4.12□□□□□ -1.75
PTPN3-205ENST00000447271 MIAQ16674 131 aa4.12□□□□□ -1.75
PTPN3-205ENST00000447271 C1orf158Q8N1D5 194 aa4.12□□□□□ -1.75
PTPN3-205ENST00000447271 PHLDA1Q8WV24 401 aaPredicted RBP4.12□□□□□ -1.75
PTPN3-205ENST00000447271 PRO0255Q9UI72 69 aa4.12□□□□□ -1.75
PTPN3-205ENST00000447271 PKHD1L1Q86WI1 4243 aa4.11□□□□□ -1.75
PTPN3-205ENST00000447271 A0A1B0GUV1 79 aa4.11□□□□□ -1.75
PTPN3-205ENST00000447271 ACYP1P07311 99 aa4.11□□□□□ -1.75
PTPN3-205ENST00000447271 MIFP14174 115 aa4.11□□□□□ -1.75
PTPN3-205ENST00000447271 MUSTN1Q8IVN3 82 aa4.11□□□□□ -1.75
PTPN3-205ENST00000447271 PPDPFLQ8WWR9 84 aa4.11□□□□□ -1.75
PTPN3-205ENST00000447271 CHCHD5Q9BSY4 110 aa4.11□□□□□ -1.75
PTPN3-205ENST00000447271 CHCHD7Q9BUK0 85 aa4.11□□□□□ -1.75
PTPN3-205ENST00000447271 CDC42SE2Q9NRR3 84 aa4.11□□□□□ -1.75
PTPN3-205ENST00000447271 TRBV6-8A0A0A6YYG3 113 aa4.1□□□□□ -1.75
PTPN3-205ENST00000447271 A4D1N5 150 aa4.1□□□□□ -1.75
PTPN3-205ENST00000447271 H0YGX0 51 aa4.1□□□□□ -1.75
PTPN3-205ENST00000447271 SPRY2O43597 315 aa4.1□□□□□ -1.75
PTPN3-205ENST00000447271 GAGE7O76087 117 aa4.1□□□□□ -1.75
PTPN3-205ENST00000447271 GAGE12FP0CL80 117 aa4.1□□□□□ -1.75
PTPN3-205ENST00000447271 GAGE12GP0CL81 117 aa4.1□□□□□ -1.75
PTPN3-205ENST00000447271 GAGE12IP0CL82 117 aa4.1□□□□□ -1.75
PTPN3-205ENST00000447271 SPART-AS1P0CW21 52 aa4.1□□□□□ -1.75
PTPN3-205ENST00000447271 RPL35AP18077 110 aaKnown RBP4.1□□□□□ -1.75
PTPN3-205ENST00000447271 EDN2P20800 178 aa4.1□□□□□ -1.75
PTPN3-205ENST00000447271 CXCL5P42830 114 aa4.1□□□□□ -1.75
PTPN3-205ENST00000447271 C21orf62-AS1Q17RA5 79 aa4.1□□□□□ -1.75
PTPN3-205ENST00000447271 C6orf226Q5I0X4 101 aa4.1□□□□□ -1.75
PTPN3-205ENST00000447271 CARD19Q96LW7 228 aa4.1□□□□□ -1.75
PTPN3-205ENST00000447271 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.09□□□□□ -1.75
PTPN3-205ENST00000447271 TRAV13-1A0A0B4J241 112 aa4.09□□□□□ -1.75
PTPN3-205ENST00000447271 IGKV2-29A2NJV5 120 aaPredicted RBP4.09□□□□□ -1.75
PTPN3-205ENST00000447271 GAGE12JA6NER3 117 aa4.09□□□□□ -1.75
PTPN3-205ENST00000447271 IBA57-AS1B1ANH7 110 aa4.09□□□□□ -1.75
PTPN3-205ENST00000447271 H3BT86 120 aa4.09□□□□□ -1.75
PTPN3-205ENST00000447271 RTL8CO15255 209 aa4.09□□□□□ -1.75
PTPN3-205ENST00000447271 EMP1P54849 157 aa4.09□□□□□ -1.75
PTPN3-205ENST00000447271 RBX1P62877 108 aa4.09□□□□□ -1.75
PTPN3-205ENST00000447271 GAGE4Q13068 117 aa4.09□□□□□ -1.75
PTPN3-205ENST00000447271 GAGE5Q13069 117 aa4.09□□□□□ -1.75
PTPN3-205ENST00000447271 COX17Q14061 63 aa4.09□□□□□ -1.75
PTPN3-205ENST00000447271 MRPL23Q16540 153 aaKnown RBP4.09□□□□□ -1.75
PTPN3-205ENST00000447271 Q6ZTI0 123 aa4.09□□□□□ -1.75
PTPN3-205ENST00000447271 C18orf65Q6ZTR6 163 aa4.09□□□□□ -1.75
PTPN3-205ENST00000447271 TEN1Q86WV5 123 aa4.09□□□□□ -1.75
PTPN3-205ENST00000447271 TTTY13Q9BZ97 58 aa4.09□□□□□ -1.75
PTPN3-205ENST00000447271 SELENOKQ9Y6D0 94 aa4.09□□□□□ -1.75
PTPN3-205ENST00000447271 IGLV5-39A0A0G2JS06 123 aa4.08□□□□□ -1.76
PTPN3-205ENST00000447271 TRBV10-2A0A0K0K1G8 114 aa4.08□□□□□ -1.76
PTPN3-205ENST00000447271 GAGE12HA6NDE8 117 aa4.08□□□□□ -1.76
PTPN3-205ENST00000447271 K7ERJ3 54 aa4.08□□□□□ -1.76
PTPN3-205ENST00000447271 SLC25A20O43772 301 aa4.08□□□□□ -1.76
PTPN3-205ENST00000447271 TSPAN13O95857 204 aa4.08□□□□□ -1.76
PTPN3-205ENST00000447271 DNAL4O96015 105 aa4.08□□□□□ -1.76
PTPN3-205ENST00000447271 IGHV3-33P01772 117 aa4.08□□□□□ -1.76
PTPN3-205ENST00000447271 ATP5G1P05496 136 aa4.08□□□□□ -1.76
PTPN3-205ENST00000447271 CKS1BP61024 79 aa4.08□□□□□ -1.76
PTPN3-205ENST00000447271 FOXI1Q12951 378 aa4.08□□□□□ -1.76
PTPN3-205ENST00000447271 KRTAP15-1Q3LI76 137 aa4.08□□□□□ -1.76
PTPN3-205ENST00000447271 ETDBQ3ZM63 59 aa4.08□□□□□ -1.76
PTPN3-205ENST00000447271 LINC00242Q5T6M2 205 aa4.08□□□□□ -1.76
PTPN3-205ENST00000447271 CFAP161Q6P656 301 aa4.08□□□□□ -1.76
PTPN3-205ENST00000447271 ANKRD29Q8N6D5 301 aa4.08□□□□□ -1.76
PTPN3-205ENST00000447271 Q9H8V8 135 aa4.08□□□□□ -1.76
PTPN3-205ENST00000447271 CDKN2A-AS1Q9UH64 79 aa4.08□□□□□ -1.76
PTPN3-205ENST00000447271 IGHV3-38A0A0C4DH36 116 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms