RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 C11orf68Q9H3H3 251 aaKnown RBP6.56□□□□□ -1.36
COL6A4P1-201ENST00000446690 TRBV20-1A0A075B6N2 111 aa6.55□□□□□ -1.36
COL6A4P1-201ENST00000446690 A0A087WZ39 114 aa6.55□□□□□ -1.36
COL6A4P1-201ENST00000446690 TIMM17BO60830 172 aa6.55□□□□□ -1.36
COL6A4P1-201ENST00000446690 DEFB121Q5J5C9 76 aa6.55□□□□□ -1.36
COL6A4P1-201ENST00000446690 CMYA5Q8N3K9 4069 aa6.55□□□□□ -1.36
COL6A4P1-201ENST00000446690 MRAPQ8TCY5 172 aa6.55□□□□□ -1.36
COL6A4P1-201ENST00000446690 PKD1L1Q8TDX9 2849 aa6.55□□□□□ -1.36
COL6A4P1-201ENST00000446690 MAST4O15021 2626 aa6.54□□□□□ -1.36
COL6A4P1-201ENST00000446690 A0A0B4J2C4 111 aa6.54□□□□□ -1.36
COL6A4P1-201ENST00000446690 NANOS2P60321 138 aaKnown RBP6.54□□□□□ -1.36
COL6A4P1-201ENST00000446690 HERV-K104P63124 156 aa6.54□□□□□ -1.36
COL6A4P1-201ENST00000446690 REG3AQ06141 175 aa6.54□□□□□ -1.36
COL6A4P1-201ENST00000446690 C6orf226Q5I0X4 101 aa6.54□□□□□ -1.36
COL6A4P1-201ENST00000446690 LELP1Q5T871 98 aa6.54□□□□□ -1.36
COL6A4P1-201ENST00000446690 IGHV3-33P01772 117 aa6.54□□□□□ -1.36
COL6A4P1-201ENST00000446690 LYPD5Q6UWN5 251 aa6.54□□□□□ -1.36
COL6A4P1-201ENST00000446690 IFITM1P13164 125 aa6.53□□□□□ -1.36
COL6A4P1-201ENST00000446690 KPRPQ5T749 579 aaPredicted RBP6.53□□□□□ -1.36
COL6A4P1-201ENST00000446690 C11orf45Q8TAV5 145 aa6.53□□□□□ -1.36
COL6A4P1-201ENST00000446690 LINC00308Q8TCZ7 52 aa6.53□□□□□ -1.36
COL6A4P1-201ENST00000446690 NDUFV3P56181 108 aaKnown RBP6.53□□□□□ -1.36
COL6A4P1-201ENST00000446690 CHCHD10Q8WYQ3 142 aaPredicted RBP6.53□□□□□ -1.36
COL6A4P1-201ENST00000446690 LINC00158P58513 81 aa6.52□□□□□ -1.37
COL6A4P1-201ENST00000446690 KLK12Q9UKR0 248 aa6.52□□□□□ -1.37
COL6A4P1-201ENST00000446690 CCDC179H3BU77 68 aa6.51□□□□□ -1.37
COL6A4P1-201ENST00000446690 M0QXV9 152 aa6.51□□□□□ -1.37
COL6A4P1-201ENST00000446690 SLC25A20O43772 301 aa6.51□□□□□ -1.37
COL6A4P1-201ENST00000446690 MALP21145 153 aa6.51□□□□□ -1.37
COL6A4P1-201ENST00000446690 PFN2P35080 140 aa6.51□□□□□ -1.37
COL6A4P1-201ENST00000446690 GAGE2BQ13066 116 aa6.51□□□□□ -1.37
COL6A4P1-201ENST00000446690 GAGE2EQ4V326 116 aa6.51□□□□□ -1.37
COL6A4P1-201ENST00000446690 GAGE2DQ9UEU5 116 aa6.51□□□□□ -1.37
COL6A4P1-201ENST00000446690 COL6A5A8TX70 2615 aa6.51□□□□□ -1.37
COL6A4P1-201ENST00000446690 DEFB131BA0A096LNP1 70 aa6.51□□□□□ -1.37
COL6A4P1-201ENST00000446690 CD164L2Q6UWJ8 174 aa6.51□□□□□ -1.37
COL6A4P1-201ENST00000446690 SOSTDC1Q6X4U4 206 aa6.51□□□□□ -1.37
COL6A4P1-201ENST00000446690 COX7A2LO14548 114 aa6.5□□□□□ -1.37
COL6A4P1-201ENST00000446690 SNCGO76070 127 aa6.5□□□□□ -1.37
COL6A4P1-201ENST00000446690 MIR7-3HGQ8N6C7 128 aa6.5□□□□□ -1.37
COL6A4P1-201ENST00000446690 C9JAW5 83 aa6.5□□□□□ -1.37
COL6A4P1-201ENST00000446690 C2orf82Q6UX34 121 aa6.5□□□□□ -1.37
COL6A4P1-201ENST00000446690 COPS9Q8WXC6 57 aa6.5□□□□□ -1.37
COL6A4P1-201ENST00000446690 K7EIL1 84 aa6.49□□□□□ -1.37
COL6A4P1-201ENST00000446690 RPL13AP40429 203 aaKnown RBP6.49□□□□□ -1.37
COL6A4P1-201ENST00000446690 H3BNG1 76 aa6.49□□□□□ -1.37
COL6A4P1-201ENST00000446690 Q6Q795 121 aa6.49□□□□□ -1.37
COL6A4P1-201ENST00000446690 WFDC10BQ8IUB3 73 aa6.49□□□□□ -1.37
COL6A4P1-201ENST00000446690 MDFIQ99750 246 aa6.49□□□□□ -1.37
COL6A4P1-201ENST00000446690 TRIAP1O43715 76 aa6.48□□□□□ -1.37
COL6A4P1-201ENST00000446690 TTC32Q5I0X7 151 aa6.48□□□□□ -1.37
COL6A4P1-201ENST00000446690 SMIM20Q8N5G0 67 aa6.48□□□□□ -1.37
COL6A4P1-201ENST00000446690 UBE2WQ96B02 151 aa6.48□□□□□ -1.37
COL6A4P1-201ENST00000446690 IBA57-AS1B1ANH7 110 aa6.48□□□□□ -1.37
COL6A4P1-201ENST00000446690 CRPP02741 224 aa6.48□□□□□ -1.37
COL6A4P1-201ENST00000446690 ESRGQ1W209 222 aa6.48□□□□□ -1.37
COL6A4P1-201ENST00000446690 ENHOQ6UWT2 76 aa6.48□□□□□ -1.37
COL6A4P1-201ENST00000446690 Q8IZM0 81 aa6.48□□□□□ -1.37
COL6A4P1-201ENST00000446690 NTN5Q8WTR8 489 aaPredicted RBP6.48□□□□□ -1.37
COL6A4P1-201ENST00000446690 TRBV30A0A0K0K1B3 111 aa6.47□□□□□ -1.37
COL6A4P1-201ENST00000446690 COX6CP09669 75 aa6.46□□□□□ -1.38
COL6A4P1-201ENST00000446690 LINC01561Q8N1V8 128 aa6.46□□□□□ -1.38
COL6A4P1-201ENST00000446690 LINC01600Q96MT4 127 aa6.46□□□□□ -1.38
COL6A4P1-201ENST00000446690 SND1-IT1Q9HBX3 110 aa6.46□□□□□ -1.38
COL6A4P1-201ENST00000446690 PRR34Q9NV39 138 aa6.46□□□□□ -1.38
COL6A4P1-201ENST00000446690 LINC00526Q96FQ7 95 aa6.45□□□□□ -1.38
COL6A4P1-201ENST00000446690 TM2D3Q9BRN9 247 aa6.45□□□□□ -1.38
COL6A4P1-201ENST00000446690 DNAH3Q8TD57 4116 aa6.45□□□□□ -1.38
COL6A4P1-201ENST00000446690 TRAV8-4A0A0B4J246 113 aa6.45□□□□□ -1.38
COL6A4P1-201ENST00000446690 TEX49A0A1B0GTD5 131 aa6.45□□□□□ -1.38
COL6A4P1-201ENST00000446690 KIAA0087Q14695 138 aa6.45□□□□□ -1.38
COL6A4P1-201ENST00000446690 ATXN8Q156A1 80 aa6.45□□□□□ -1.38
COL6A4P1-201ENST00000446690 LINC01620Q4KN68 170 aa6.45□□□□□ -1.38
COL6A4P1-201ENST00000446690 C15orf53Q8NAA6 179 aa6.45□□□□□ -1.38
COL6A4P1-201ENST00000446690 NOTCH1P46531 2555 aa6.45□□□□□ -1.38
COL6A4P1-201ENST00000446690 CCL18P55774 89 aa6.44□□□□□ -1.38
COL6A4P1-201ENST00000446690 C9orf116Q5BN46 136 aaPredicted RBP6.44□□□□□ -1.38
COL6A4P1-201ENST00000446690 C6orf223Q8N319 242 aa6.44□□□□□ -1.38
COL6A4P1-201ENST00000446690 CLEC2BQ92478 149 aa6.44□□□□□ -1.38
COL6A4P1-201ENST00000446690 TRBV10-2A0A0K0K1G8 114 aa6.43□□□□□ -1.38
COL6A4P1-201ENST00000446690 SPAG11BQ08648 103 aa6.43□□□□□ -1.38
COL6A4P1-201ENST00000446690 TENM3Q9P273 2699 aa6.43□□□□□ -1.38
COL6A4P1-201ENST00000446690 TRAV10A0A0B4J240 114 aa6.43□□□□□ -1.38
COL6A4P1-201ENST00000446690 IGKV2-28A0A075B6P5 120 aa6.42□□□□□ -1.38
COL6A4P1-201ENST00000446690 IGKV2D-28P01615 120 aa6.42□□□□□ -1.38
COL6A4P1-201ENST00000446690 CXCL5P42830 114 aa6.42□□□□□ -1.38
COL6A4P1-201ENST00000446690 UNQ6190/PRO20217Q6UXQ8 127 aa6.42□□□□□ -1.38
COL6A4P1-201ENST00000446690 KLK5Q9Y337 293 aaPredicted RBP6.42□□□□□ -1.38
COL6A4P1-201ENST00000446690 TRAV13-2A0A0B4J235 113 aa6.42□□□□□ -1.38
COL6A4P1-201ENST00000446690 C10orf25Q5T742 122 aa6.42□□□□□ -1.38
COL6A4P1-201ENST00000446690 LINC00337Q8N6G1 96 aa6.42□□□□□ -1.38
COL6A4P1-201ENST00000446690 OR13C6PQ8NH95 151 aa6.42□□□□□ -1.38
COL6A4P1-201ENST00000446690 PPDPFQ9H3Y8 114 aa6.41□□□□□ -1.38
COL6A4P1-201ENST00000446690 PRR3P79522 188 aaKnown RBP6.4□□□□□ -1.38
COL6A4P1-201ENST00000446690 IGKV2D-24A0A075B6R9 120 aa6.39□□□□□ -1.39
COL6A4P1-201ENST00000446690 COX17Q14061 63 aa6.39□□□□□ -1.39
COL6A4P1-201ENST00000446690 HIGD2BQ4VC39 106 aa6.39□□□□□ -1.39
COL6A4P1-201ENST00000446690 Q9HAA7 133 aa6.39□□□□□ -1.39
COL6A4P1-201ENST00000446690 LINC01556Q5JQF7 62 aa6.39□□□□□ -1.39
COL6A4P1-201ENST00000446690 C1orf43Q9BWL3 253 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms