RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 NBEAL1Q6ZS30 2694 aa11.72□□□□□ -0.53
LAPTM4B-201ENST00000445593 NDUFA1O15239 70 aa11.71□□□□□ -0.53
LAPTM4B-201ENST00000445593 MGAM2Q2M2H8 2515 aa11.71□□□□□ -0.54
LAPTM4B-201ENST00000445593 FAM236AA0A1B0GUQ0 79 aa11.71□□□□□ -0.54
LAPTM4B-201ENST00000445593 FAM236BA0A1B0GV22 79 aa11.71□□□□□ -0.54
LAPTM4B-201ENST00000445593 C1orf43Q9BWL3 253 aa11.7□□□□□ -0.54
LAPTM4B-201ENST00000445593 IGLV5-39A0A0G2JS06 123 aa11.7□□□□□ -0.54
LAPTM4B-201ENST00000445593 ANK2Q01484 3957 aa11.69□□□□□ -0.54
LAPTM4B-201ENST00000445593 CIRBPQ14011 172 aaKnown RBP11.69□□□□□ -0.54
LAPTM4B-201ENST00000445593 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.68□□□□□ -0.54
LAPTM4B-201ENST00000445593 TRAV8-4A0A0B4J246 113 aa11.68□□□□□ -0.54
LAPTM4B-201ENST00000445593 SLC25A20O43772 301 aa11.68□□□□□ -0.54
LAPTM4B-201ENST00000445593 LINC00612Q8N6U2 182 aa11.68□□□□□ -0.54
LAPTM4B-201ENST00000445593 Q8NAQ8 132 aa11.67□□□□□ -0.54
LAPTM4B-201ENST00000445593 LYRM9A8MSI8 78 aa11.67□□□□□ -0.54
LAPTM4B-201ENST00000445593 PRB2P02812 416 aaPredicted RBP11.67□□□□□ -0.54
LAPTM4B-201ENST00000445593 PFN2P35080 140 aa11.67□□□□□ -0.54
LAPTM4B-201ENST00000445593 KRTAP10-11P60412 298 aa11.67□□□□□ -0.54
LAPTM4B-201ENST00000445593 SPANXDQ9BXN6 97 aa11.67□□□□□ -0.54
LAPTM4B-201ENST00000445593 SPANXCQ9NY87 97 aa11.67□□□□□ -0.54
LAPTM4B-201ENST00000445593 A0A0B4J2C4 111 aa11.66□□□□□ -0.54
LAPTM4B-201ENST00000445593 CYSRT1A8MQ03 144 aa11.66□□□□□ -0.54
LAPTM4B-201ENST00000445593 TRIAP1O43715 76 aa11.66□□□□□ -0.54
LAPTM4B-201ENST00000445593 RPL13AP40429 203 aaKnown RBP11.66□□□□□ -0.54
LAPTM4B-201ENST00000445593 SOSTDC1Q6X4U4 206 aa11.66□□□□□ -0.54
LAPTM4B-201ENST00000445593 LINC00269Q8N2A0 174 aa11.66□□□□□ -0.54
LAPTM4B-201ENST00000445593 LINC00308Q8TCZ7 52 aa11.66□□□□□ -0.54
LAPTM4B-201ENST00000445593 WFDC9Q8NEX5 89 aa11.65□□□□□ -0.54
LAPTM4B-201ENST00000445593 COX7B2Q8TF08 81 aa11.65□□□□□ -0.54
LAPTM4B-201ENST00000445593 LINC00959A0A1B0GUT2 108 aa11.65□□□□□ -0.54
LAPTM4B-201ENST00000445593 ANGP03950 147 aaKnown RBP11.65□□□□□ -0.54
LAPTM4B-201ENST00000445593 ATP5G1P05496 136 aa11.65□□□□□ -0.54
LAPTM4B-201ENST00000445593 TMEM126AQ9H061 195 aa11.65□□□□□ -0.55
LAPTM4B-201ENST00000445593 OR13C6PQ8NH95 151 aa11.64□□□□□ -0.55
LAPTM4B-201ENST00000445593 CLEC2BQ92478 149 aa11.64□□□□□ -0.55
LAPTM4B-201ENST00000445593 J3KT08 172 aa11.64□□□□□ -0.55
LAPTM4B-201ENST00000445593 SPART-AS1P0CW21 52 aa11.63□□□□□ -0.55
LAPTM4B-201ENST00000445593 LINC00158P58513 81 aa11.63□□□□□ -0.55
LAPTM4B-201ENST00000445593 LYRM7Q5U5X0 104 aa11.63□□□□□ -0.55
LAPTM4B-201ENST00000445593 IGHV3OR16-9A0A0B4J2B5 98 aa11.63□□□□□ -0.55
LAPTM4B-201ENST00000445593 DSCR8Q96T75 97 aa11.63□□□□□ -0.55
LAPTM4B-201ENST00000445593 C2orf82Q6UX34 121 aa11.62□□□□□ -0.55
LAPTM4B-201ENST00000445593 MIR7-3HGQ8N6C7 128 aa11.62□□□□□ -0.55
LAPTM4B-201ENST00000445593 H7C423 109 aa11.62□□□□□ -0.55
LAPTM4B-201ENST00000445593 ICOSQ9Y6W8 199 aa11.62□□□□□ -0.55
LAPTM4B-201ENST00000445593 MIFP14174 115 aa11.61□□□□□ -0.55
LAPTM4B-201ENST00000445593 C6orf226Q5I0X4 101 aa11.61□□□□□ -0.55
LAPTM4B-201ENST00000445593 FAM19A3Q7Z5A8 133 aa11.6□□□□□ -0.55
LAPTM4B-201ENST00000445593 SS18Q15532 418 aa11.59□□□□□ -0.55
LAPTM4B-201ENST00000445593 hADV29S1A0JD25 119 aa11.59□□□□□ -0.55
LAPTM4B-201ENST00000445593 LINC00526Q96FQ7 95 aa11.59□□□□□ -0.55
LAPTM4B-201ENST00000445593 GAGE2AQ6NT46 116 aa11.58□□□□□ -0.56
LAPTM4B-201ENST00000445593 TIMM17BO60830 172 aa11.57□□□□□ -0.56
LAPTM4B-201ENST00000445593 A0A087WZ39 114 aa11.57□□□□□ -0.56
LAPTM4B-201ENST00000445593 REG3AQ06141 175 aa11.56□□□□□ -0.56
LAPTM4B-201ENST00000445593 KLK12Q9UKR0 248 aa11.56□□□□□ -0.56
LAPTM4B-201ENST00000445593 A0A0U1RQV1 116 aa11.55□□□□□ -0.56
LAPTM4B-201ENST00000445593 CHCHD10Q8WYQ3 142 aaPredicted RBP11.55□□□□□ -0.56
LAPTM4B-201ENST00000445593 Q6ZTC4 211 aa11.55□□□□□ -0.56
LAPTM4B-201ENST00000445593 ATXN8Q156A1 80 aa11.54□□□□□ -0.56
LAPTM4B-201ENST00000445593 COX6CP09669 75 aa11.54□□□□□ -0.56
LAPTM4B-201ENST00000445593 MALP21145 153 aa11.54□□□□□ -0.56
LAPTM4B-201ENST00000445593 LINC01620Q4KN68 170 aa11.54□□□□□ -0.56
LAPTM4B-201ENST00000445593 CYSTM1Q9H1C7 97 aa11.54□□□□□ -0.56
LAPTM4B-201ENST00000445593 C9orf116Q5BN46 136 aaPredicted RBP11.53□□□□□ -0.56
LAPTM4B-201ENST00000445593 TRBV30A0A0K0K1B3 111 aa11.53□□□□□ -0.56
LAPTM4B-201ENST00000445593 A0A1B0GUV1 79 aa11.53□□□□□ -0.56
LAPTM4B-201ENST00000445593 MRAPQ8TCY5 172 aa11.53□□□□□ -0.56
LAPTM4B-201ENST00000445593 SND1-IT1Q9HBX3 110 aa11.53□□□□□ -0.56
LAPTM4B-201ENST00000445593 A0A0J9YWU9 116 aa11.5□□□□□ -0.57
LAPTM4B-201ENST00000445593 NANOS2P60321 138 aaKnown RBP11.5□□□□□ -0.57
LAPTM4B-201ENST00000445593 C3orf22Q8N5N4 141 aa11.5□□□□□ -0.57
LAPTM4B-201ENST00000445593 CCL18P55774 89 aa11.5□□□□□ -0.57
LAPTM4B-201ENST00000445593 UBE2WQ96B02 151 aa11.5□□□□□ -0.57
LAPTM4B-201ENST00000445593 COX7A2LO14548 114 aa11.49□□□□□ -0.57
LAPTM4B-201ENST00000445593 WIPF1O43516 503 aa11.49□□□□□ -0.57
LAPTM4B-201ENST00000445593 PRR3P79522 188 aaKnown RBP11.49□□□□□ -0.57
LAPTM4B-201ENST00000445593 LINC00337Q8N6G1 96 aa11.49□□□□□ -0.57
LAPTM4B-201ENST00000445593 CMYA5Q8N3K9 4069 aa11.49□□□□□ -0.57
LAPTM4B-201ENST00000445593 C6orf223Q8N319 242 aa11.49□□□□□ -0.57
LAPTM4B-201ENST00000445593 CRPP02741 224 aa11.48□□□□□ -0.57
LAPTM4B-201ENST00000445593 KPRPQ5T749 579 aaPredicted RBP11.48□□□□□ -0.57
LAPTM4B-201ENST00000445593 WFDC10BQ8IUB3 73 aa11.48□□□□□ -0.57
LAPTM4B-201ENST00000445593 OXTP01178 125 aa11.47□□□□□ -0.57
LAPTM4B-201ENST00000445593 IGKV2-28A0A075B6P5 120 aa11.46□□□□□ -0.57
LAPTM4B-201ENST00000445593 IGKV2D-28P01615 120 aa11.46□□□□□ -0.57
LAPTM4B-201ENST00000445593 LELP1Q5T871 98 aa11.46□□□□□ -0.57
LAPTM4B-201ENST00000445593 CD164L2Q6UWJ8 174 aa11.46□□□□□ -0.57
LAPTM4B-201ENST00000445593 DEFB121Q5J5C9 76 aa11.46□□□□□ -0.58
LAPTM4B-201ENST00000445593 LYPD5Q6UWN5 251 aa11.46□□□□□ -0.58
LAPTM4B-201ENST00000445593 COPS9Q8WXC6 57 aa11.45□□□□□ -0.58
LAPTM4B-201ENST00000445593 SEC61GP60059 68 aa11.45□□□□□ -0.58
LAPTM4B-201ENST00000445593 STAB2Q8WWQ8 2551 aa11.44□□□□□ -0.58
LAPTM4B-201ENST00000445593 IBA57-AS1B1ANH7 110 aa11.44□□□□□ -0.58
LAPTM4B-201ENST00000445593 LST1O00453 97 aa11.43□□□□□ -0.58
LAPTM4B-201ENST00000445593 Q9HAA7 133 aa11.43□□□□□ -0.58
LAPTM4B-201ENST00000445593 Q6Q795 121 aa11.43□□□□□ -0.58
LAPTM4B-201ENST00000445593 FAM218AQ96MZ4 157 aa11.43□□□□□ -0.58
LAPTM4B-201ENST00000445593 TRBV10-2A0A0K0K1G8 114 aa11.42□□□□□ -0.58
LAPTM4B-201ENST00000445593 C10orf25Q5T742 122 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms