RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 A0A0J9YXY3 114 aa11.6□□□□□ -0.55
CMTM3-202ENST00000424011 VSIG2Q96IQ7 327 aa11.6□□□□□ -0.55
CMTM3-202ENST00000424011 CDC42SE2Q9NRR3 84 aa11.6□□□□□ -0.55
CMTM3-202ENST00000424011 LST1O00453 97 aa11.6□□□□□ -0.55
CMTM3-202ENST00000424011 FAM19A3Q7Z5A8 133 aa11.6□□□□□ -0.55
CMTM3-202ENST00000424011 CDKN2A-AS1Q9UH64 79 aa11.6□□□□□ -0.55
CMTM3-202ENST00000424011 COX6A2Q02221 97 aa11.59□□□□□ -0.55
CMTM3-202ENST00000424011 Q8NAQ8 132 aa11.59□□□□□ -0.55
CMTM3-202ENST00000424011 IGLV5-45A0A087WSX0 123 aa11.59□□□□□ -0.55
CMTM3-202ENST00000424011 GYPEP15421 78 aa11.59□□□□□ -0.55
CMTM3-202ENST00000424011 COX7CP15954 63 aa11.59□□□□□ -0.55
CMTM3-202ENST00000424011 DAD1P61803 113 aa11.59□□□□□ -0.55
CMTM3-202ENST00000424011 EGFEM1PQ0D2K5 195 aa11.59□□□□□ -0.55
CMTM3-202ENST00000424011 SPART-AS1P0CW21 52 aa11.58□□□□□ -0.56
CMTM3-202ENST00000424011 LINC00643Q86TS7 51 aa11.58□□□□□ -0.56
CMTM3-202ENST00000424011 CLEC2BQ92478 149 aa11.58□□□□□ -0.56
CMTM3-202ENST00000424011 NDUFA12Q9UI09 145 aa11.58□□□□□ -0.56
CMTM3-202ENST00000424011 CRYGAP11844 174 aa11.57□□□□□ -0.56
CMTM3-202ENST00000424011 LINC00242Q5T6M2 205 aa11.57□□□□□ -0.56
CMTM3-202ENST00000424011 GAGE2AQ6NT46 116 aa11.57□□□□□ -0.56
CMTM3-202ENST00000424011 DEFB4AO15263 64 aa11.57□□□□□ -0.56
CMTM3-202ENST00000424011 PAX4O43316 350 aa11.57□□□□□ -0.56
CMTM3-202ENST00000424011 SMCR5Q8TEV8 140 aa11.57□□□□□ -0.56
CMTM3-202ENST00000424011 LITAFQ99732 161 aa11.57□□□□□ -0.56
CMTM3-202ENST00000424011 ANK2Q01484 3957 aa11.56□□□□□ -0.56
CMTM3-202ENST00000424011 KRTAP10-11P60412 298 aa11.55□□□□□ -0.56
CMTM3-202ENST00000424011 CXCL5P42830 114 aa11.55□□□□□ -0.56
CMTM3-202ENST00000424011 C2orf48Q96LS8 159 aa11.55□□□□□ -0.56
CMTM3-202ENST00000424011 PKD1L1Q8TDX9 2849 aa11.55□□□□□ -0.56
CMTM3-202ENST00000424011 TRAV13-1A0A0B4J241 112 aa11.54□□□□□ -0.56
CMTM3-202ENST00000424011 ADAMTSL4-AS1Q5T5F5 129 aa11.54□□□□□ -0.56
CMTM3-202ENST00000424011 SDIM1Q6ZPB5 146 aa11.54□□□□□ -0.56
CMTM3-202ENST00000424011 C5orf38Q86SI9 138 aa11.54□□□□□ -0.56
CMTM3-202ENST00000424011 MDFIQ99750 246 aa11.54□□□□□ -0.56
CMTM3-202ENST00000424011 CELA1Q9UNI1 258 aa11.51□□□□□ -0.57
CMTM3-202ENST00000424011 IGLV5-39A0A0G2JS06 123 aa11.51□□□□□ -0.57
CMTM3-202ENST00000424011 PRSS2P07478 247 aa11.51□□□□□ -0.57
CMTM3-202ENST00000424011 HIST1H4AP62805 103 aaKnown RBP11.49□□□□□ -0.57
CMTM3-202ENST00000424011 A0A1B0GUV1 79 aa11.49□□□□□ -0.57
CMTM3-202ENST00000424011 SMIM1B2RUZ4 78 aa11.49□□□□□ -0.57
CMTM3-202ENST00000424011 F5H768 121 aa11.49□□□□□ -0.57
CMTM3-202ENST00000424011 ATOX1O00244 68 aa11.49□□□□□ -0.57
CMTM3-202ENST00000424011 NDUFA1O15239 70 aa11.49□□□□□ -0.57
CMTM3-202ENST00000424011 TRACP01848 142 aa11.49□□□□□ -0.57
CMTM3-202ENST00000424011 hADV29S1A0JD25 119 aa11.48□□□□□ -0.57
CMTM3-202ENST00000424011 MIAQ16674 131 aa11.48□□□□□ -0.57
CMTM3-202ENST00000424011 IGLV4-60A0A075B6I1 120 aa11.48□□□□□ -0.57
CMTM3-202ENST00000424011 NPC2P61916 151 aa11.48□□□□□ -0.57
CMTM3-202ENST00000424011 DPH3Q96FX2 82 aa11.48□□□□□ -0.57
CMTM3-202ENST00000424011 TMEM258P61165 79 aa11.47□□□□□ -0.57
CMTM3-202ENST00000424011 Q9H8V8 135 aa11.46□□□□□ -0.57
CMTM3-202ENST00000424011 DNAH3Q8TD57 4116 aa11.46□□□□□ -0.58
CMTM3-202ENST00000424011 A0A096LPF7 62 aa11.46□□□□□ -0.58
CMTM3-202ENST00000424011 TIMM17BO60830 172 aa11.46□□□□□ -0.58
CMTM3-202ENST00000424011 DAND5Q8N907 189 aa11.46□□□□□ -0.58
CMTM3-202ENST00000424011 CYSTM1Q9H1C7 97 aa11.45□□□□□ -0.58
CMTM3-202ENST00000424011 HTN3P15516 51 aa11.44□□□□□ -0.58
CMTM3-202ENST00000424011 CIRBPQ14011 172 aaKnown RBP11.44□□□□□ -0.58
CMTM3-202ENST00000424011 ZNF625Q96I27 306 aaPredicted RBP11.44□□□□□ -0.58
CMTM3-202ENST00000424011 NBEAL2Q6ZNJ1 2754 aa11.44□□□□□ -0.58
CMTM3-202ENST00000424011 IGKV3OR2-268A0A0C4DH90 116 aa11.44□□□□□ -0.58
CMTM3-202ENST00000424011 C11orf68Q9H3H3 251 aaKnown RBP11.43□□□□□ -0.58
CMTM3-202ENST00000424011 SS18Q15532 418 aa11.42□□□□□ -0.58
CMTM3-202ENST00000424011 LINC00959A0A1B0GUT2 108 aa11.41□□□□□ -0.58
CMTM3-202ENST00000424011 C4orf26Q17RF5 130 aa11.41□□□□□ -0.58
CMTM3-202ENST00000424011 RETNQ9HD89 108 aa11.41□□□□□ -0.58
CMTM3-202ENST00000424011 A0A0U1RRA0 63 aa11.41□□□□□ -0.58
CMTM3-202ENST00000424011 OXTP01178 125 aa11.41□□□□□ -0.58
CMTM3-202ENST00000424011 IGHV3OR16-9A0A0B4J2B5 98 aa11.4□□□□□ -0.58
CMTM3-202ENST00000424011 RPL18AQ02543 176 aaKnown RBP11.4□□□□□ -0.58
CMTM3-202ENST00000424011 H3BNG1 76 aa11.4□□□□□ -0.59
CMTM3-202ENST00000424011 COX7A2LO14548 114 aa11.4□□□□□ -0.59
CMTM3-202ENST00000424011 Q5XG85 94 aa11.4□□□□□ -0.59
CMTM3-202ENST00000424011 MRAPQ8TCY5 172 aa11.4□□□□□ -0.59
CMTM3-202ENST00000424011 A0A087WZ39 114 aa11.39□□□□□ -0.59
CMTM3-202ENST00000424011 LELP1Q5T871 98 aa11.39□□□□□ -0.59
CMTM3-202ENST00000424011 COPS9Q8WXC6 57 aa11.38□□□□□ -0.59
CMTM3-202ENST00000424011 UPK3BQ9BT76 320 aa11.38□□□□□ -0.59
CMTM3-202ENST00000424011 HRCT1Q6UXD1 115 aa11.38□□□□□ -0.59
CMTM3-202ENST00000424011 LINC00308Q8TCZ7 52 aa11.38□□□□□ -0.59
CMTM3-202ENST00000424011 DSCR8Q96T75 97 aa11.38□□□□□ -0.59
CMTM3-202ENST00000424011 SERP2Q8N6R1 65 aa11.37□□□□□ -0.59
CMTM3-202ENST00000424011 COX7B2Q8TF08 81 aa11.37□□□□□ -0.59
CMTM3-202ENST00000424011 INAFM2P0DMQ5 153 aa11.37□□□□□ -0.59
CMTM3-202ENST00000424011 NOTCH1P46531 2555 aa11.36□□□□□ -0.59
CMTM3-202ENST00000424011 BAALC-AS2P0C853 105 aa11.36□□□□□ -0.59
CMTM3-202ENST00000424011 SOSTDC1Q6X4U4 206 aa11.36□□□□□ -0.59
CMTM3-202ENST00000424011 LINC01561Q8N1V8 128 aa11.36□□□□□ -0.59
CMTM3-202ENST00000424011 KPRPQ5T749 579 aaPredicted RBP11.35□□□□□ -0.59
CMTM3-202ENST00000424011 C22orf24Q9Y442 160 aa11.35□□□□□ -0.59
CMTM3-202ENST00000424011 ANGP03950 147 aaKnown RBP11.35□□□□□ -0.59
CMTM3-202ENST00000424011 TOMM7Q9P0U1 55 aa11.35□□□□□ -0.59
CMTM3-202ENST00000424011 XCL1P47992 114 aa11.34□□□□□ -0.59
CMTM3-202ENST00000424011 LINC00269Q8N2A0 174 aa11.34□□□□□ -0.59
CMTM3-202ENST00000424011 NBEAL1Q6ZS30 2694 aa11.34□□□□□ -0.59
CMTM3-202ENST00000424011 PRB2P02812 416 aaPredicted RBP11.34□□□□□ -0.59
CMTM3-202ENST00000424011 MGAM2Q2M2H8 2515 aa11.33□□□□□ -0.6
CMTM3-202ENST00000424011 REG3AQ06141 175 aa11.33□□□□□ -0.6
CMTM3-202ENST00000424011 A0A0J9YWU9 116 aa11.32□□□□□ -0.6
CMTM3-202ENST00000424011 Q6ZTC4 211 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 190 ms