RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 PRB1P04280 392 aa4.39□□□□□ -1.71
CCNT1-202ENST00000417344 IGHV4-38-2P0DP08 117 aa4.39□□□□□ -1.71
CCNT1-202ENST00000417344 CD164L2Q6UWJ8 174 aa4.39□□□□□ -1.71
CCNT1-202ENST00000417344 MUC7Q8TAX7 377 aa4.39□□□□□ -1.71
CCNT1-202ENST00000417344 MED13LQ71F56 2210 aa4.39□□□□□ -1.71
CCNT1-202ENST00000417344 TRAV22A0A0B4J277 110 aa4.39□□□□□ -1.71
CCNT1-202ENST00000417344 SPATA3Q8NHX4 192 aa4.39□□□□□ -1.71
CCNT1-202ENST00000417344 KRTAP3-1Q9BYR8 98 aa4.39□□□□□ -1.71
CCNT1-202ENST00000417344 C19orf84I3L1E1 186 aa4.38□□□□□ -1.71
CCNT1-202ENST00000417344 LMO4P61968 165 aa4.38□□□□□ -1.71
CCNT1-202ENST00000417344 KTN1-AS1Q86SY8 53 aa4.38□□□□□ -1.71
CCNT1-202ENST00000417344 C1orf64Q8NEQ6 169 aa4.38□□□□□ -1.71
CCNT1-202ENST00000417344 RBM12B-AS1Q9P1G2 102 aa4.38□□□□□ -1.71
CCNT1-202ENST00000417344 SPTBN2O15020 2390 aa4.38□□□□□ -1.71
CCNT1-202ENST00000417344 H3BQ85 93 aa4.38□□□□□ -1.71
CCNT1-202ENST00000417344 CACNA1BQ00975 2339 aa4.37□□□□□ -1.71
CCNT1-202ENST00000417344 A8MTW9 85 aa4.37□□□□□ -1.71
CCNT1-202ENST00000417344 IGKV4-1P06312 121 aa4.37□□□□□ -1.71
CCNT1-202ENST00000417344 IGHV4-31P0DP07 118 aa4.37□□□□□ -1.71
CCNT1-202ENST00000417344 Q8N9L7 120 aa4.37□□□□□ -1.71
CCNT1-202ENST00000417344 LYRM9A8MSI8 78 aa4.36□□□□□ -1.71
CCNT1-202ENST00000417344 DEFB131AP59861 70 aa4.36□□□□□ -1.71
CCNT1-202ENST00000417344 UBE2BP63146 152 aa4.36□□□□□ -1.71
CCNT1-202ENST00000417344 SYCNQ0VAF6 134 aa4.36□□□□□ -1.71
CCNT1-202ENST00000417344 LY6EQ16553 131 aa4.36□□□□□ -1.71
CCNT1-202ENST00000417344 Q6ZQY7 126 aa4.36□□□□□ -1.71
CCNT1-202ENST00000417344 DOPEY2Q9Y3R5 2298 aa4.36□□□□□ -1.71
CCNT1-202ENST00000417344 CNOT1A5YKK6 2376 aaKnown RBP4.36□□□□□ -1.71
CCNT1-202ENST00000417344 PCNX1Q96RV3 2341 aa4.36□□□□□ -1.71
CCNT1-202ENST00000417344 IGLV4-60A0A075B6I1 120 aa4.36□□□□□ -1.71
CCNT1-202ENST00000417344 TRGV1A0A0A0MS02 117 aa4.36□□□□□ -1.71
CCNT1-202ENST00000417344 C11orf71Q6IPW1 123 aa4.36□□□□□ -1.71
CCNT1-202ENST00000417344 KRTAP1-3Q8IUG1 177 aa4.36□□□□□ -1.71
CCNT1-202ENST00000417344 LINC01006Q8NI28 216 aa4.36□□□□□ -1.71
CCNT1-202ENST00000417344 LINC00588Q9Y4M8 146 aa4.36□□□□□ -1.71
CCNT1-202ENST00000417344 INSP01308 110 aa4.35□□□□□ -1.71
CCNT1-202ENST00000417344 Q8IZM0 81 aa4.35□□□□□ -1.71
CCNT1-202ENST00000417344 DCHS2Q6V1P9 2916 aa4.34□□□□□ -1.71
CCNT1-202ENST00000417344 A8MU10 97 aa4.34□□□□□ -1.71
CCNT1-202ENST00000417344 A8MUN3 132 aa4.34□□□□□ -1.71
CCNT1-202ENST00000417344 BRD3OSQ6XYD6 125 aa4.34□□□□□ -1.71
CCNT1-202ENST00000417344 BSNQ9UPA5 3926 aa4.34□□□□□ -1.71
CCNT1-202ENST00000417344 TECTAO75443 2155 aa4.34□□□□□ -1.71
CCNT1-202ENST00000417344 LCE6AA0A183 80 aa4.34□□□□□ -1.71
CCNT1-202ENST00000417344 M0R378 163 aa4.34□□□□□ -1.71
CCNT1-202ENST00000417344 PSCAO43653 123 aa4.34□□□□□ -1.71
CCNT1-202ENST00000417344 COX17Q14061 63 aa4.34□□□□□ -1.71
CCNT1-202ENST00000417344 LINC00959A0A1B0GUT2 108 aa4.33□□□□□ -1.72
CCNT1-202ENST00000417344 A6NDX4 124 aa4.33□□□□□ -1.72
CCNT1-202ENST00000417344 H3BUX3 64 aa4.33□□□□□ -1.72
CCNT1-202ENST00000417344 PLA2G2AP14555 144 aa4.33□□□□□ -1.72
CCNT1-202ENST00000417344 COX7BP24311 80 aa4.33□□□□□ -1.72
CCNT1-202ENST00000417344 KHDC1LQ5JSQ8 128 aa4.33□□□□□ -1.72
CCNT1-202ENST00000417344 STHQ8IWL8 128 aa4.33□□□□□ -1.72
CCNT1-202ENST00000417344 MUC3AQ02505 3323 aa4.33□□□□□ -1.72
CCNT1-202ENST00000417344 TRGV2A0A075B6R0 118 aa4.33□□□□□ -1.72
CCNT1-202ENST00000417344 Q5VV11 94 aa4.33□□□□□ -1.72
CCNT1-202ENST00000417344 LINC00269Q8N2A0 174 aa4.33□□□□□ -1.72
CCNT1-202ENST00000417344 Q8NDZ9 215 aa4.33□□□□□ -1.72
CCNT1-202ENST00000417344 CYP4F30PQ9H0H9 118 aa4.33□□□□□ -1.72
CCNT1-202ENST00000417344 TRBV6-8A0A0A6YYG3 113 aa4.32□□□□□ -1.72
CCNT1-202ENST00000417344 UBE2AP49459 152 aa4.32□□□□□ -1.72
CCNT1-202ENST00000417344 CELA1Q9UNI1 258 aa4.32□□□□□ -1.72
CCNT1-202ENST00000417344 PIEZO2Q9H5I5 2752 aa4.32□□□□□ -1.72
CCNT1-202ENST00000417344 DMXL1Q9Y485 3027 aa4.32□□□□□ -1.72
CCNT1-202ENST00000417344 MAP1BP46821 2468 aaKnown RBP4.32□□□□□ -1.72
CCNT1-202ENST00000417344 LOC100131303A0A0U1RQF7 123 aa4.31□□□□□ -1.72
CCNT1-202ENST00000417344 NDUFS5O43920 106 aa4.31□□□□□ -1.72
CCNT1-202ENST00000417344 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.31□□□□□ -1.72
CCNT1-202ENST00000417344 SMIM29Q86T20 159 aa4.31□□□□□ -1.72
CCNT1-202ENST00000417344 LINC00612Q8N6U2 182 aa4.31□□□□□ -1.72
CCNT1-202ENST00000417344 ZCCHC13Q8WW36 166 aaKnown RBP4.31□□□□□ -1.72
CCNT1-202ENST00000417344 LRBAP50851 2863 aa4.31□□□□□ -1.72
CCNT1-202ENST00000417344 C16orf90A8MZG2 172 aa4.31□□□□□ -1.72
CCNT1-202ENST00000417344 IGLV6-57P01721 117 aa4.31□□□□□ -1.72
CCNT1-202ENST00000417344 SPTBN1Q01082 2364 aaKnown RBP4.31□□□□□ -1.72
CCNT1-202ENST00000417344 TRGV4A0A0C4DH28 118 aa4.3□□□□□ -1.72
CCNT1-202ENST00000417344 CHKB-CPT1BH3BT56 60 aa4.3□□□□□ -1.72
CCNT1-202ENST00000417344 APOC4P55056 127 aa4.3□□□□□ -1.72
CCNT1-202ENST00000417344 DEFB114Q30KQ6 69 aa4.3□□□□□ -1.72
CCNT1-202ENST00000417344 FBXL19-AS1Q494R0 122 aa4.3□□□□□ -1.72
CCNT1-202ENST00000417344 C10orf99Q6UWK7 81 aa4.3□□□□□ -1.72
CCNT1-202ENST00000417344 PHF5AQ7RTV0 110 aaKnown RBP4.3□□□□□ -1.72
CCNT1-202ENST00000417344 SPTSSBQ8NFR3 76 aa4.3□□□□□ -1.72
CCNT1-202ENST00000417344 C11orf45Q8TAV5 145 aa4.3□□□□□ -1.72
CCNT1-202ENST00000417344 UBE2E2Q96LR5 201 aa4.3□□□□□ -1.72
CCNT1-202ENST00000417344 MAP6D1Q9H9H5 199 aa4.3□□□□□ -1.72
CCNT1-202ENST00000417344 IGHV4-30-2A0A087WSY4 118 aa4.29□□□□□ -1.72
CCNT1-202ENST00000417344 IGHV4-28A0A0C4DH34 117 aa4.29□□□□□ -1.72
CCNT1-202ENST00000417344 KIAA0087Q14695 138 aa4.29□□□□□ -1.72
CCNT1-202ENST00000417344 C9orf116Q5BN46 136 aaPredicted RBP4.29□□□□□ -1.72
CCNT1-202ENST00000417344 C10orf25Q5T742 122 aa4.29□□□□□ -1.72
CCNT1-202ENST00000417344 LCE4AQ5TA78 99 aa4.29□□□□□ -1.72
CCNT1-202ENST00000417344 ATP11AUNQ6ZP68 121 aa4.29□□□□□ -1.72
CCNT1-202ENST00000417344 DIRC1Q969H9 104 aa4.29□□□□□ -1.72
CCNT1-202ENST00000417344 CACNA1HO95180 2353 aa4.29□□□□□ -1.72
CCNT1-202ENST00000417344 PTPRZ1P23471 2315 aaPredicted RBP4.29□□□□□ -1.72
CCNT1-202ENST00000417344 GPR179Q6PRD1 2367 aa4.29□□□□□ -1.72
CCNT1-202ENST00000417344 PRR4Q16378 134 aa4.29□□□□□ -1.72
CCNT1-202ENST00000417344 KRTAP9-9Q9BYP9 154 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms