RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 MIR7-3HGQ8N6C7 128 aa7.56□□□□□ -1.2
CALD1-203ENST00000393118 COX6A2Q02221 97 aa7.56□□□□□ -1.2
CALD1-203ENST00000393118 PIK3CD-AS1Q5SR53 167 aa7.56□□□□□ -1.2
CALD1-203ENST00000393118 ADAMTSL4-AS1Q5T5F5 129 aa7.56□□□□□ -1.2
CALD1-203ENST00000393118 COX7B2Q8TF08 81 aa7.56□□□□□ -1.2
CALD1-203ENST00000393118 Q8N2B8 174 aa7.55□□□□□ -1.2
CALD1-203ENST00000393118 AMELXQ99217 191 aa7.55□□□□□ -1.2
CALD1-203ENST00000393118 C1orf195Q5TG92 126 aa7.55□□□□□ -1.2
CALD1-203ENST00000393118 SND1-IT1Q9HBX3 110 aa7.55□□□□□ -1.2
CALD1-203ENST00000393118 BSNQ9UPA5 3926 aa7.55□□□□□ -1.2
CALD1-203ENST00000393118 PRB2P02812 416 aaPredicted RBP7.55□□□□□ -1.2
CALD1-203ENST00000393118 LINC00242Q5T6M2 205 aa7.55□□□□□ -1.2
CALD1-203ENST00000393118 DPH3Q96FX2 82 aa7.55□□□□□ -1.2
CALD1-203ENST00000393118 SNURFQ9Y675 71 aa7.55□□□□□ -1.2
CALD1-203ENST00000393118 NDUFC2O95298 119 aa7.54□□□□□ -1.2
CALD1-203ENST00000393118 FAM222AQ5U5X8 452 aa7.54□□□□□ -1.2
CALD1-203ENST00000393118 TRAV13-2A0A0B4J235 113 aa7.54□□□□□ -1.2
CALD1-203ENST00000393118 NCR3O14931 201 aa7.54□□□□□ -1.2
CALD1-203ENST00000393118 SLPIP03973 132 aa7.54□□□□□ -1.2
CALD1-203ENST00000393118 APOC4P55056 127 aa7.54□□□□□ -1.2
CALD1-203ENST00000393118 HILS1P60008 231 aa7.54□□□□□ -1.2
CALD1-203ENST00000393118 GCN1Q92616 2671 aaKnown RBP7.54□□□□□ -1.2
CALD1-203ENST00000393118 NBEAL2Q6ZNJ1 2754 aa7.54□□□□□ -1.2
CALD1-203ENST00000393118 LY6G6DO95868 133 aa7.54□□□□□ -1.2
CALD1-203ENST00000393118 ENHOQ6UWT2 76 aa7.54□□□□□ -1.2
CALD1-203ENST00000393118 F8P00451 2351 aa7.54□□□□□ -1.2
CALD1-203ENST00000393118 FBN2P35556 2912 aa7.54□□□□□ -1.2
CALD1-203ENST00000393118 C9orf66Q5T8R8 295 aa7.53□□□□□ -1.2
CALD1-203ENST00000393118 LINC00308Q8TCZ7 52 aa7.53□□□□□ -1.2
CALD1-203ENST00000393118 BEAN1Q3B7T3 259 aa7.53□□□□□ -1.2
CALD1-203ENST00000393118 ITPR2Q14571 2701 aa7.53□□□□□ -1.2
CALD1-203ENST00000393118 NDUFA1O15239 70 aa7.52□□□□□ -1.2
CALD1-203ENST00000393118 IGLV1-51P01701 117 aa7.52□□□□□ -1.2
CALD1-203ENST00000393118 TRBV6-8A0A0A6YYG3 113 aa7.52□□□□□ -1.21
CALD1-203ENST00000393118 TRBV6-4A0A1B0GX49 114 aa7.52□□□□□ -1.21
CALD1-203ENST00000393118 CXCL5P42830 114 aa7.52□□□□□ -1.21
CALD1-203ENST00000393118 CDC42SE2Q9NRR3 84 aa7.52□□□□□ -1.21
CALD1-203ENST00000393118 PRO0255Q9UI72 69 aa7.52□□□□□ -1.21
CALD1-203ENST00000393118 UNC79Q9P2D8 2635 aa7.51□□□□□ -1.21
CALD1-203ENST00000393118 ORMDL1Q9P0S3 153 aa7.51□□□□□ -1.21
CALD1-203ENST00000393118 CRYGAP11844 174 aa7.5□□□□□ -1.21
CALD1-203ENST00000393118 SETXQ7Z333 2677 aaKnown RBP7.5□□□□□ -1.21
CALD1-203ENST00000393118 UPK3BQ9BT76 320 aa7.5□□□□□ -1.21
CALD1-203ENST00000393118 PRO0628Q9UI54 55 aa7.5□□□□□ -1.21
CALD1-203ENST00000393118 MXRA5Q9NR99 2828 aa7.5□□□□□ -1.21
CALD1-203ENST00000393118 SMIM1B2RUZ4 78 aa7.49□□□□□ -1.21
CALD1-203ENST00000393118 SEC61GP60059 68 aa7.49□□□□□ -1.21
CALD1-203ENST00000393118 IGLV4-60A0A075B6I1 120 aa7.49□□□□□ -1.21
CALD1-203ENST00000393118 NTM-AS1Q6ZSK4 140 aa7.49□□□□□ -1.21
CALD1-203ENST00000393118 LINC00269Q8N2A0 174 aa7.49□□□□□ -1.21
CALD1-203ENST00000393118 RPS28P62857 69 aaKnown RBP7.49□□□□□ -1.21
CALD1-203ENST00000393118 TIMM17BO60830 172 aa7.48□□□□□ -1.21
CALD1-203ENST00000393118 APCP25054 2843 aa7.48□□□□□ -1.21
CALD1-203ENST00000393118 SOSTDC1Q6X4U4 206 aa7.48□□□□□ -1.21
CALD1-203ENST00000393118 SMCR5Q8TEV8 140 aa7.48□□□□□ -1.21
CALD1-203ENST00000393118 SPART-AS1P0CW21 52 aa7.47□□□□□ -1.21
CALD1-203ENST00000393118 KLK12Q9UKR0 248 aa7.47□□□□□ -1.21
CALD1-203ENST00000393118 UBR5O95071 2799 aaPredicted RBP7.46□□□□□ -1.21
CALD1-203ENST00000393118 NDUFC2-KCTD14E9PQ53 114 aa7.46□□□□□ -1.22
CALD1-203ENST00000393118 CUBNO60494 3623 aa7.46□□□□□ -1.22
CALD1-203ENST00000393118 FHL2Q14192 279 aa7.46□□□□□ -1.22
CALD1-203ENST00000393118 TEP1Q99973 2627 aaKnown RBP7.46□□□□□ -1.22
CALD1-203ENST00000393118 H0YGX0 51 aa7.45□□□□□ -1.22
CALD1-203ENST00000393118 LINC00846Q9NV44 126 aa7.45□□□□□ -1.22
CALD1-203ENST00000393118 CR1P17927 2039 aa7.45□□□□□ -1.22
CALD1-203ENST00000393118 SCXQ7RTU7 201 aa7.45□□□□□ -1.22
CALD1-203ENST00000393118 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.45□□□□□ -1.22
CALD1-203ENST00000393118 F8WEM9 126 aa7.45□□□□□ -1.22
CALD1-203ENST00000393118 KRTAP1-3Q8IUG1 177 aa7.45□□□□□ -1.22
CALD1-203ENST00000393118 DEFB121Q5J5C9 76 aa7.44□□□□□ -1.22
CALD1-203ENST00000393118 Q6JHZ5 121 aa7.44□□□□□ -1.22
CALD1-203ENST00000393118 C16orf95Q9H693 158 aa7.44□□□□□ -1.22
CALD1-203ENST00000393118 SMIM26A0A096LP01 95 aa7.44□□□□□ -1.22
CALD1-203ENST00000393118 IGHV4-28A0A0C4DH34 117 aa7.44□□□□□ -1.22
CALD1-203ENST00000393118 LINC00959A0A1B0GUT2 108 aa7.44□□□□□ -1.22
CALD1-203ENST00000393118 ZNF561-AS1K7EIQ3 104 aa7.44□□□□□ -1.22
CALD1-203ENST00000393118 FAM19A1Q7Z5A9 133 aa7.44□□□□□ -1.22
CALD1-203ENST00000393118 REG3AQ06141 175 aa7.43□□□□□ -1.22
CALD1-203ENST00000393118 CHCHD10Q8WYQ3 142 aaPredicted RBP7.43□□□□□ -1.22
CALD1-203ENST00000393118 SERP1Q9Y6X1 66 aa7.43□□□□□ -1.22
CALD1-203ENST00000393118 LINC00336Q6ZUF6 198 aa7.43□□□□□ -1.22
CALD1-203ENST00000393118 MAST4O15021 2626 aa7.43□□□□□ -1.22
CALD1-203ENST00000393118 EIF4EBP3O60516 100 aaPredicted RBP7.42□□□□□ -1.22
CALD1-203ENST00000393118 A8MTW9 85 aa7.41□□□□□ -1.22
CALD1-203ENST00000393118 SPAG11BQ08648 103 aa7.41□□□□□ -1.22
CALD1-203ENST00000393118 LYRM9A8MSI8 78 aa7.41□□□□□ -1.22
CALD1-203ENST00000393118 LRCOL1A6NCL2 159 aa7.4□□□□□ -1.22
CALD1-203ENST00000393118 IBA57-AS1B1ANH7 110 aa7.4□□□□□ -1.22
CALD1-203ENST00000393118 CCL18P55774 89 aa7.4□□□□□ -1.22
CALD1-203ENST00000393118 JMJD7-PLA2G4BH0Y9G9 81 aa7.4□□□□□ -1.23
CALD1-203ENST00000393118 OXLD1Q5BKU9 147 aa7.4□□□□□ -1.23
CALD1-203ENST00000393118 RMI2Q96E14 147 aa7.4□□□□□ -1.23
CALD1-203ENST00000393118 RETNQ9HD89 108 aa7.4□□□□□ -1.23
CALD1-203ENST00000393118 A0A087WYN8 130 aa7.39□□□□□ -1.23
CALD1-203ENST00000393118 IGLV5-39A0A0G2JS06 123 aa7.39□□□□□ -1.23
CALD1-203ENST00000393118 LITAFQ99732 161 aa7.39□□□□□ -1.23
CALD1-203ENST00000393118 IGKV2D-24A0A075B6R9 120 aa7.39□□□□□ -1.23
CALD1-203ENST00000393118 GIG44P09565 113 aaPredicted RBP7.38□□□□□ -1.23
CALD1-203ENST00000393118 SMIM11BQ8TCY0 68 aa7.38□□□□□ -1.23
CALD1-203ENST00000393118 HIGD2BQ4VC39 106 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms